Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0615
         (798 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g01980.1 68415.m00133 sodium proton exchanger, putative (NHX7...    28   8.3  

>At2g01980.1 68415.m00133 sodium proton exchanger, putative (NHX7)
           (SOS1) identical to putative Na+/H+ antiporter SOS1
           [Arabidopsis thaliana] gi|8515714|gb|AAF76139; Member of
           The Monovalent Cation:Proton Antiporter (CPA1) Family,
           PMID:11500563
          Length = 1146

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 21/91 (23%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
 Frame = +3

Query: 297 VCISNRILNINHTAYRIRLNLFQHMYYIVI--SKTVFLK*IIIIIRLYQSTVGYRLRIIK 470
           V I+  IL+ +  AY+     F  + Y+ I  S+ V +  +  ++  +   + ++  II 
Sbjct: 332 VVIAEGILDSDKIAYQGNSWRFLFLLYVYIQLSRVVVVGVLYPLLCRFGYGLDWKESIIL 391

Query: 471 LWNSNSPSIAL*IRTPIKANTTNTHTVHKQT 563
           +W+    ++AL +   +K ++ N+H + K+T
Sbjct: 392 VWSGLRGAVALALSLSVKQSSGNSH-ISKET 421


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,733,754
Number of Sequences: 28952
Number of extensions: 283513
Number of successful extensions: 502
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 490
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 502
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1804564000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)