Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0614
         (649 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    25   0.41 
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    25   0.54 
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    24   1.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.9  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   6.6  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   6.6  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   8.7  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 25.4 bits (53), Expect = 0.41
 Identities = 8/30 (26%), Positives = 18/30 (60%)
 Frame = -1

Query: 448 SGSAFRFEGWGSRCNYTETLQLICQGGWRI 359
           +G++ ++ G      Y E ++L  +GGW++
Sbjct: 284 AGNSGKYTGEAGMLGYNEIVELQKEGGWKV 313


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 25.0 bits (52), Expect = 0.54
 Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = -1

Query: 370 GWRICVVDVYG-LQ*PLNIRWAVSSSTHLSNKKKKNIILTY 251
           G ++ + D YG ++ P+  +   S  THL + +KKN I+ +
Sbjct: 247 GIKVDIRDAYGNVKIPVLCKLIQSIPTHLLDSEKKNFIVDH 287


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -2

Query: 543 YFHYFTTENYRAYGGRTCCESARVGTTY 460
           YF  F T+   AYG R   E+  VG+ +
Sbjct: 91  YFRQFWTDPRLAYGKRPGVETLSVGSEF 118


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 5/14 (35%), Positives = 11/14 (78%)
 Frame = +1

Query: 244 LYNMLILCFFFFYC 285
           ++ + +LC ++FYC
Sbjct: 277 MHLLFLLCIYYFYC 290



 Score = 21.4 bits (43), Expect = 6.6
 Identities = 5/9 (55%), Positives = 8/9 (88%)
 Frame = +1

Query: 259 ILCFFFFYC 285
           +LC ++FYC
Sbjct: 143 LLCIYYFYC 151


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -2

Query: 516 YRAYGGRTCCESARVGTT 463
           YR YGG   C+  + G T
Sbjct: 104 YRFYGGFLLCKVVKYGQT 121


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +1

Query: 262 LCFFFFYCLDG 294
           +C  F+YC+DG
Sbjct: 121 ICDKFYYCVDG 131


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/27 (33%), Positives = 12/27 (44%)
 Frame = -1

Query: 445 GSAFRFEGWGSRCNYTETLQLICQGGW 365
           G A R+ G      Y E ++    GGW
Sbjct: 289 GDAGRYTGERGMMGYNEIVEAQNAGGW 315


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,207
Number of Sequences: 336
Number of extensions: 3209
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)