Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0614
         (649 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    28   0.29 
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    24   4.8  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   6.3  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    23   6.3  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    23   6.3  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   8.3  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    23   8.3  

>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 27.9 bits (59), Expect = 0.29
 Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
 Frame = +3

Query: 324 SGYWSP*TSTTQMRHPP*HISCKVSV*LQRLPHPSNRNALP-LHGRNKWYLPARTHNRSY 500
           SGY+S   S+    H P H+S  +   +       + +A P  H  +  + P       Y
Sbjct: 462 SGYFSGGFSSLHSHHSPHHVSPGMGSTVNGASLTHSHHAHPHHHHHHHHHHPTAADLAGY 521

Query: 501 HHKHDNFQ 524
           HH+H+  Q
Sbjct: 522 HHQHNVIQ 529


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 50  DNADQRYVFCYYINI 6
           DNA   Y+ CYY N+
Sbjct: 73  DNATAEYLSCYYQNV 87


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +3

Query: 408 QRLPHPSNRNALPLHGRNKWYLPARTHNRSYHHKH 512
           Q   HPS+++  P H         +TH+  +HH+H
Sbjct: 266 QSQQHPSSQHQQPTH---------QTHHHHHHHQH 291


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +3

Query: 408 QRLPHPSNRNALPLHGRNKWYLPARTHNRSYHHKH 512
           Q   HPS+++  P H         +TH+  +HH+H
Sbjct: 266 QSQQHPSSQHQQPTH---------QTHHHHHHHQH 291


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +3

Query: 408 QRLPHPSNRNALPLHGRNKWYLPARTHNRSYHHKH 512
           Q   HPS+++  P H         +TH+  +HH+H
Sbjct: 218 QSQQHPSSQHQQPTH---------QTHHHHHHHQH 243


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -1

Query: 613  ATVSTHHPVGPSE 575
            +T+S  HPVGPS+
Sbjct: 1046 STLSPSHPVGPSD 1058


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +3

Query: 312 HLMLSGYWSP*TSTTQMRHPP*HISCKV 395
           HL L+   +  T  + ++HPP HIS  V
Sbjct: 712 HLELAPAKTEMTIISSLKHPPSHISIDV 739


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 654,328
Number of Sequences: 2352
Number of extensions: 12021
Number of successful extensions: 21
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)