Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0614
         (649 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X58983-1|CAA41732.1|  671|Drosophila melanogaster orthodenticle ...    29   5.4  
AE014298-1217|AAF46400.3|  671|Drosophila melanogaster CG12154-P...    29   5.4  
AE014298-1216|AAX52481.1|  665|Drosophila melanogaster CG12154-P...    29   5.4  

>X58983-1|CAA41732.1|  671|Drosophila melanogaster orthodenticle
           protein.
          Length = 671

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +2

Query: 398 SIVTTATPPFEPKRTTASRQK*VVPTRADSQQVLPP 505
           S +TT +PP  P    ++ Q+ + P R     +LPP
Sbjct: 437 SSITTPSPPITPMSPQSAPQRPMPPNRPSPPTILPP 472


>AE014298-1217|AAF46400.3|  671|Drosophila melanogaster CG12154-PA,
           isoform A protein.
          Length = 671

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +2

Query: 398 SIVTTATPPFEPKRTTASRQK*VVPTRADSQQVLPP 505
           S +TT +PP  P    ++ Q+ + P R     +LPP
Sbjct: 437 SSITTPSPPITPMSPQSAPQRPMPPNRPSPPTILPP 472


>AE014298-1216|AAX52481.1|  665|Drosophila melanogaster CG12154-PB,
           isoform B protein.
          Length = 665

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +2

Query: 398 SIVTTATPPFEPKRTTASRQK*VVPTRADSQQVLPP 505
           S +TT +PP  P    ++ Q+ + P R     +LPP
Sbjct: 431 SSITTPSPPITPMSPQSAPQRPMPPNRPSPPTILPP 466


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,658,046
Number of Sequences: 53049
Number of extensions: 557495
Number of successful extensions: 1197
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1197
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)