Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0614
(649 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 25 0.83
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 25 0.83
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 24 1.5
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 24 1.5
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 24 1.5
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 24 1.5
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 22 5.9
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 21 7.8
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 21 7.8
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 21 7.8
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 21 7.8
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 24.6 bits (51), Expect = 0.83
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +3
Query: 60 RRHDASPHVVVSLN*TLLFPVNTKYTANNDAIN*KLTNKDFFF 188
R P ++ SL+ + N KY NN+ N NK ++
Sbjct: 72 RERSREPKIISSLSNNTIHNNNYKYNYNNNNYNNNNYNKKLYY 114
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 24.6 bits (51), Expect = 0.83
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +3
Query: 60 RRHDASPHVVVSLN*TLLFPVNTKYTANNDAIN*KLTNKDFFF 188
R P ++ SL+ + N KY NN+ N NK ++
Sbjct: 72 RERSREPKIISSLSNNTIHNNNYKYNYNNNNYNNNNYNKKLYY 114
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.8 bits (49), Expect = 1.5
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +3
Query: 60 RRHDASPHVVVSLN*TLLFPVNTKYTANNDAIN*KL 167
R P ++ SL+ + N KY NN+ N KL
Sbjct: 73 RERSREPKIISSLSNNTIHNNNYKYNYNNNNYNKKL 108
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.8 bits (49), Expect = 1.5
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +3
Query: 60 RRHDASPHVVVSLN*TLLFPVNTKYTANNDAIN*KL 167
R P ++ SL+ + N KY NN+ N KL
Sbjct: 73 RERSREPKIISSLSNNTIHNNNYKYNYNNNNYNKKL 108
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.8 bits (49), Expect = 1.5
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +3
Query: 60 RRHDASPHVVVSLN*TLLFPVNTKYTANNDAIN*KL 167
R P ++ SL+ + N KY NN+ N KL
Sbjct: 73 RERSREPKIISSLSNNTIHNNNYKYNYNNNNYNKKL 108
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.8 bits (49), Expect = 1.5
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +3
Query: 60 RRHDASPHVVVSLN*TLLFPVNTKYTANNDAIN*KL 167
R P ++ SL+ + N KY NN+ N KL
Sbjct: 73 RERSREPKIISSLSNNTIHNNNYKYNYNNNNYNKKL 108
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 21.8 bits (44), Expect = 5.9
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 487 TTGPTTISTIIFSGKVMKVFFFN 555
TT P+T ++ S K +KVF N
Sbjct: 387 TTEPSTTTSTTISQKHIKVFVVN 409
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.4 bits (43), Expect = 7.8
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +1
Query: 451 TAEISGTYPRGLTTGPTTIST 513
T + G P G TTGP I T
Sbjct: 406 TQKREGGPPTGATTGPNEIVT 426
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.4 bits (43), Expect = 7.8
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +1
Query: 451 TAEISGTYPRGLTTGPTTIST 513
T + G P G TTGP I T
Sbjct: 426 TQKREGGPPTGATTGPNEIVT 446
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.4 bits (43), Expect = 7.8
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +1
Query: 451 TAEISGTYPRGLTTGPTTIST 513
T + G P G TTGP I T
Sbjct: 375 TQKREGGPPTGATTGPNEIVT 395
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 21.4 bits (43), Expect = 7.8
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -1
Query: 100 FKETTTCGDASWRRQSVITRTKDMC 26
FK+T C R+S +TR +C
Sbjct: 339 FKQTICCKTRIIGRRSWVTRESQIC 363
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,933
Number of Sequences: 438
Number of extensions: 3467
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19560480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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