Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0612
         (557 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5AWD8 Cluster: Putative uncharacterized protein; n=1; ...    36   0.85 
UniRef50_A5BA96 Cluster: Putative uncharacterized protein; n=1; ...    33   6.0  
UniRef50_Q29FT6 Cluster: GA18161-PA; n=1; Drosophila pseudoobscu...    33   6.0  
UniRef50_Q5CUF9 Cluster: Conserved COOH terminal-specific cystei...    32   7.9  

>UniRef50_A5AWD8 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 600

 Score = 35.5 bits (78), Expect = 0.85
 Identities = 17/39 (43%), Positives = 24/39 (61%)
 Frame = +2

Query: 233 TTNKMRKQVNSSSKGIEQRCKNRTIPNLNLKRITAARVS 349
           TT    KQV SSS  +E +CK+ +  NLN K +  A++S
Sbjct: 502 TTYSKSKQVKSSSSAVETQCKSISSSNLNSKAVINAQMS 540


>UniRef50_A5BA96 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 399

 Score = 32.7 bits (71), Expect = 6.0
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +2

Query: 233 TTNKMRKQVNSSSKGIEQRCKNRTIPNLNLKRITAARVS 349
           TT    KQV SS+   E +CK+ +  NLN K +  A++S
Sbjct: 236 TTYSKSKQVKSSNSAXETQCKSISSSNLNSKAVINAQMS 274


>UniRef50_Q29FT6 Cluster: GA18161-PA; n=1; Drosophila
           pseudoobscura|Rep: GA18161-PA - Drosophila pseudoobscura
           (Fruit fly)
          Length = 341

 Score = 32.7 bits (71), Expect = 6.0
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +1

Query: 214 SQEXQSHH*QDEKTGQLKLQRHRTKVQKQNHPQSKPQ 324
           S+E   HH     T  L L+    KV++Q HP ++PQ
Sbjct: 170 SEEEDKHHVTHSPTSCLPLRLQSIKVEQQQHPNTQPQ 206


>UniRef50_Q5CUF9 Cluster: Conserved COOH terminal-specific cysteine
            rich domain; n=2; Cryptosporidium|Rep: Conserved COOH
            terminal-specific cysteine rich domain - Cryptosporidium
            parvum Iowa II
          Length = 1198

 Score = 32.3 bits (70), Expect = 7.9
 Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
 Frame = +3

Query: 9    ILKESIKLNQNLLK--FITYYLLDSKTLIKSLKNGCK*YELRYKSLYGLKYVL 161
            +LK  I   ++LLK   + YYL+ S  +I  LKNG K  +  Y ++ G+ Y L
Sbjct: 927  LLKICIDEYKDLLKNNSLIYYLIYSSNIIGLLKNGSKSAKFTYNNVSGILYEL 979


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 428,658,067
Number of Sequences: 1657284
Number of extensions: 6563377
Number of successful extensions: 14040
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13535
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14008
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37071859483
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)