Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0612
         (557 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    24   3.9  
DQ007318-1|AAY24700.1|  153|Anopheles gambiae lysozyme c-4 protein.    23   6.8  
AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein p...    23   9.0  

>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 23.8 bits (49), Expect = 3.9
 Identities = 11/43 (25%), Positives = 22/43 (51%)
 Frame = +1

Query: 190 KR*NQNK*SQEXQSHH*QDEKTGQLKLQRHRTKVQKQNHPQSK 318
           +R  Q +  Q+ Q    Q ++  Q + Q+ + + Q+Q  PQ +
Sbjct: 183 ERERQQQQQQQQQQQQQQQQQQQQQRQQQQQCQQQRQQQPQQQ 225


>DQ007318-1|AAY24700.1|  153|Anopheles gambiae lysozyme c-4 protein.
          Length = 153

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 272 KGIEQRCKNRTIPNLN 319
           KG   RCK +T+P+L+
Sbjct: 134 KGWVNRCKQKTLPDLS 149


>AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein
           protein.
          Length = 344

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = +1

Query: 256 GQLKLQRHRTKVQKQNHPQSKPQA 327
           G +  ++ +   +KQN P+ +P+A
Sbjct: 96  GSINKRKKKKSKKKQNKPRKRPEA 119


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 451,031
Number of Sequences: 2352
Number of extensions: 6769
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52142868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)