Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0611
         (650 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0492 - 29476883-29476949,29477030-29477166,29477292-294773...    30   1.4  
11_03_0177 + 11269754-11270320,11271701-11272180,11272663-112732...    30   1.8  
03_02_0400 - 8135283-8135490,8136047-8136213,8136289-8136477,813...    28   5.6  
08_02_1381 - 26551920-26552053,26552963-26553070,26553154-265533...    27   9.8  

>02_05_0492 -
           29476883-29476949,29477030-29477166,29477292-29477383,
           29477490-29477587,29477677-29477804,29477883-29478026,
           29478108-29478397,29478553-29478739,29479085-29479210,
           29480488-29480538,29480952-29481002,29482639-29484054
          Length = 928

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 14/56 (25%), Positives = 24/56 (42%)
 Frame = +3

Query: 105 NPGGHLYNDVIIADYDSAVERSKLIYTDNKGELITNVVNNLIRNNKMNCMSTPTSS 272
           NP  H+  +    + D A     LI  D KG+ + ++   +     M+C + P  S
Sbjct: 741 NPLEHVIGETSSEEEDDAQNNLALINKDVKGQTMADIFQQVFNATSMDCFTLPVRS 796


>11_03_0177 +
           11269754-11270320,11271701-11272180,11272663-11273292,
           11273377-11273443,11273510-11273620,11273696-11275206
          Length = 1121

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 21/53 (39%), Positives = 29/53 (54%)
 Frame = +3

Query: 162 ERSKLIYTDNKGELITNVVNNLIRNNKMNCMSTPTSSGCKAPRTSSGIVSRLS 320
           E++KLI+ D   EL TNV+      ++ N   TP     K PR SS IV ++S
Sbjct: 581 EQTKLIFRDEHNELPTNVIAGPAIPSEKN-QPTPLEDN-KGPRDSS-IVDKIS 630


>03_02_0400 -
           8135283-8135490,8136047-8136213,8136289-8136477,
           8136560-8136655,8136746-8136874,8136947-8137123,
           8137256-8137366,8138592-8138792,8139022-8139186,
           8139293-8139527,8139618-8139745,8139833-8139928,
           8140017-8140112,8140252-8140325,8140393-8140462,
           8140556-8140665,8140753-8140906,8141040-8141155,
           8141259-8141379,8141464-8141641,8142331-8142489,
           8142619-8142732,8142821-8143000,8143098-8143177
          Length = 1117

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +2

Query: 221 QSDTKQQDELHEYAYQLWMQGSEDIVRDCFPVEFTLIL 334
           QS +  QD+ H+   +   QGS  +  D  PV+ TL+L
Sbjct: 330 QSHSYPQDDFHKNVARTLSQGSTPMSMDFHPVQQTLLL 367


>08_02_1381 -
           26551920-26552053,26552963-26553070,26553154-26553340,
           26554107-26554316
          Length = 212

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +2

Query: 302 DCFPVEFTLILAENYVKLMYRRDGLAFTLSDNGGVAYGDSKDRTSSR 442
           D   V F +I A+      Y  DG+   + D  G    DS+D+TS +
Sbjct: 45  DTVHVSFVVIKADT--PWHYSEDGVDLVVKDPNGAQVRDSRDKTSDK 89


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,627,105
Number of Sequences: 37544
Number of extensions: 296789
Number of successful extensions: 892
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 892
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)