Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0611
         (650 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            25   2.7  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            25   2.7  
AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.        23   6.3  
AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.        23   6.3  
AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.        23   6.3  
AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.        23   6.3  
AY330182-1|AAQ16288.1|  181|Anopheles gambiae odorant-binding pr...    23   6.3  
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    23   6.3  
AJ618927-1|CAF02006.1|  235|Anopheles gambiae odorant-binding pr...    23   8.4  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   8.4  
AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA methy...    23   8.4  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 9/33 (27%), Positives = 21/33 (63%)
 Frame = +3

Query: 96   LQRNPGGHLYNDVIIADYDSAVERSKLIYTDNK 194
            +Q+  G H+ +DV+++++ S +  S L  + N+
Sbjct: 1984 IQKISGDHILSDVLLSNHQSQIITSALYSSGNE 2016


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 9/33 (27%), Positives = 21/33 (63%)
 Frame = +3

Query: 96   LQRNPGGHLYNDVIIADYDSAVERSKLIYTDNK 194
            +Q+  G H+ +DV+++++ S +  S L  + N+
Sbjct: 1985 IQKISGDHILSDVLLSNHQSQIITSALYSSGNE 2017


>AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 246 NCMSTPTSSGCKAP 287
           NC  T  ++GCKAP
Sbjct: 17  NCECTTDTTGCKAP 30


>AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 246 NCMSTPTSSGCKAP 287
           NC  T  ++GCKAP
Sbjct: 17  NCECTTDTTGCKAP 30


>AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 246 NCMSTPTSSGCKAP 287
           NC  T  ++GCKAP
Sbjct: 17  NCECTTDTTGCKAP 30


>AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 246 NCMSTPTSSGCKAP 287
           NC  T  ++GCKAP
Sbjct: 17  NCECTTDTTGCKAP 30


>AY330182-1|AAQ16288.1|  181|Anopheles gambiae odorant-binding
           protein AgamOBP56 protein.
          Length = 181

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 8/34 (23%), Positives = 18/34 (52%)
 Frame = +2

Query: 206 HKCRKQSDTKQQDELHEYAYQLWMQGSEDIVRDC 307
           +KC   ++T+  +++HE   Q +M+       +C
Sbjct: 33  YKCCNDANTENMEKIHEIKKQCFMEMEVICAMEC 66


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 246 NCMSTPTSSGCKAP 287
           NC  T  ++GCKAP
Sbjct: 593 NCECTTDTTGCKAP 606


>AJ618927-1|CAF02006.1|  235|Anopheles gambiae odorant-binding
           protein OBPjj7a protein.
          Length = 235

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 7/25 (28%), Positives = 16/25 (64%)
 Frame = +2

Query: 206 HKCRKQSDTKQQDELHEYAYQLWMQ 280
           +KC   ++T+  +++HE   Q +M+
Sbjct: 61  YKCCNDANTENMEKIHEIKKQCFME 85


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = +3

Query: 189 NKGELITNVVNNLIRNNKMNCMSTPTSSGCKAPRTSSGIVSRLSS 323
           N+G   TN  NN   NN  N  +T  S    A  ++S +++  +S
Sbjct: 91  NEGTGKTNNNNNNNNNNGSNTGATVNSGSSNAALSNSSVLNGSNS 135


>AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA
           methylase protein.
          Length = 459

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = +3

Query: 96  LQRNPGGHLYNDVIIADYDSAVERSKLIY 182
           LQ+   G L+ DV+IAD+  ++    +++
Sbjct: 276 LQQYGCGGLFVDVLIADFSRSIWADSIVF 304


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 612,871
Number of Sequences: 2352
Number of extensions: 11848
Number of successful extensions: 32
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)