Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0611
         (650 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g67490.1 68414.m07686 alpha-glucosidase I (GCS1) / KNOPF (KNF...    28   6.2  
At2g29060.1 68415.m03532 scarecrow transcription factor family p...    27   8.2  

>At1g67490.1 68414.m07686 alpha-glucosidase I (GCS1) / KNOPF (KNF)
           identical to alpha-glucosidase I (GI:16506680,
           GI:13398928) [Arabidopsis thaliana]
          Length = 852

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +3

Query: 162 ERSKLIYTDNKGELITNVVNN 224
           E+SK IYT+ +  LI NVV N
Sbjct: 790 EKSKAIYTELRSNLIRNVVRN 810


>At2g29060.1 68415.m03532 scarecrow transcription factor family
           protein 
          Length = 1336

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 16/36 (44%), Positives = 19/36 (52%)
 Frame = +2

Query: 374 LAFTLSDNGGVAYGDSKDRTSSRVSWKFIPLWENNK 481
           LA  +S  GG +Y  S   TSS   W F  L ENN+
Sbjct: 116 LAQLVSSPGGSSYASSTTTTSSDSQWSFDCL-ENNR 150


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,533,942
Number of Sequences: 28952
Number of extensions: 237916
Number of successful extensions: 674
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 674
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1354097952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)