BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0610 (632 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPCPB16A4.03c |ade10||IMP cyclohydrolase|Schizosaccharomyces pom... 106 2e-24 SPBC887.09c |||leucine-rich repeat protein Sog2 |Schizosaccharom... 30 0.32 SPBC30D10.10c |tor1||phosphatidylinositol kinase Tor1|Schizosacc... 26 5.2 SPBP8B7.30c |thi5||transcription factor Thi5|Schizosaccharomyces... 25 9.1 SPBC29A3.11c |||mitochondrial carboxylic acid transporter|Schizo... 25 9.1 SPCC1672.07 |||U3 snoRNP-associated protein Utp21 |Schizosacchar... 25 9.1 >SPCPB16A4.03c |ade10||IMP cyclohydrolase|Schizosaccharomyces pombe|chr 3|||Manual Length = 585 Score = 106 bits (255), Expect = 2e-24 Identities = 51/73 (69%), Positives = 61/73 (83%) Frame = +3 Query: 30 ALLSVSDKTGLLSLAKSLSECGLQLIASGGTARXLRNAGLTVQDVSDITRAPEMLGGRVK 209 ALLSV DKTGLL LAK+L+ G++L+ SGGTA+ +R +G+ V DVS IT APE+LGGRVK Sbjct: 3 ALLSVYDKTGLLELAKALTSKGVKLLGSGGTAKMIRESGMEVADVSSITNAPEILGGRVK 62 Query: 210 TLHPAVHAGILAR 248 TLHPAVH GILAR Sbjct: 63 TLHPAVHGGILAR 75 Score = 101 bits (241), Expect = 1e-22 Identities = 46/86 (53%), Positives = 61/86 (70%) Frame = +2 Query: 239 LSSIIHSDQEDMKRQKYEMISVVVCNXYPFVQTVSKPDVTVADAVENIDIGGVTLLRAXP 418 L+ I SD++D+ Q E I +VVCN YPF +T++KP+VT+ +AVE IDIGGVTLLRA Sbjct: 73 LARDIPSDEKDLVEQSIEKIDIVVCNLYPFRETIAKPNVTIPEAVEEIDIGGVTLLRAAA 132 Query: 419 KNHDRVTVVCDPADYDAVVKEIKENK 496 KNH RVT++ DPADY + +K Sbjct: 133 KNHARVTILSDPADYATFTDKFLSDK 158 Score = 25.8 bits (54), Expect = 5.2 Identities = 16/37 (43%), Positives = 17/37 (45%) Frame = +1 Query: 520 RQRLALKAFTHTFGL*LRHIRTYFRKQYSXGASPTDL 630 R ALKAF T I YFRKQY+ G L Sbjct: 164 RNTYALKAFASTASYDAA-ITDYFRKQYAAGVDQLTL 199 >SPBC887.09c |||leucine-rich repeat protein Sog2 |Schizosaccharomyces pombe|chr 2|||Manual Length = 886 Score = 29.9 bits (64), Expect = 0.32 Identities = 15/37 (40%), Positives = 20/37 (54%) Frame = +2 Query: 146 PHSSRCVGHHESTGDARRSGENFTSSGTCWDLSSIIH 256 PHS GH +ST + S N S GT +D S++ H Sbjct: 247 PHSHSPAGHQQSTPKSTLSKTNENSEGTLYD-SNVAH 282 >SPBC30D10.10c |tor1||phosphatidylinositol kinase Tor1|Schizosaccharomyces pombe|chr 2|||Manual Length = 2335 Score = 25.8 bits (54), Expect = 5.2 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = +1 Query: 541 AFTHTFGL*LRHIRTYFRKQYSXGASPTDL 630 +F TFG LR R+Y++K G PT+L Sbjct: 1868 SFAQTFGYDLRKARSYWQKFLQDG-DPTEL 1896 >SPBP8B7.30c |thi5||transcription factor Thi5|Schizosaccharomyces pombe|chr 2|||Manual Length = 857 Score = 25.0 bits (52), Expect = 9.1 Identities = 7/16 (43%), Positives = 11/16 (68%) Frame = -3 Query: 267 SWSEWIIELRSQHVPL 220 +W W+ EL S ++PL Sbjct: 781 AWQNWVTELSSSNIPL 796 >SPBC29A3.11c |||mitochondrial carboxylic acid transporter|Schizosaccharomyces pombe|chr 2|||Manual Length = 297 Score = 25.0 bits (52), Expect = 9.1 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%) Frame = -3 Query: 399 VTPPMSMFSTASATVTS-GLDTVWTNGYXLQTT 304 V PP+S F +AS V G +W NGY T Sbjct: 155 VRPPLSSFQSASDIVRRYGFTALW-NGYRYHLT 186 >SPCC1672.07 |||U3 snoRNP-associated protein Utp21 |Schizosaccharomyces pombe|chr 3|||Manual Length = 902 Score = 25.0 bits (52), Expect = 9.1 Identities = 12/55 (21%), Positives = 25/55 (45%) Frame = +2 Query: 350 DVTVADAVENIDIGGVTLLRAXPKNHDRVTVVCDPADYDAVVKEIKENKHHQTLW 514 D + ++++D+G + D V V CD D+ + +++ K + LW Sbjct: 517 DFNKGNLIDSLDVGSSITHAIYQHSSDLVAVACD--DFGIRIVDVQTRKIVRELW 569 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,252,108 Number of Sequences: 5004 Number of extensions: 40804 Number of successful extensions: 115 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 110 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 115 length of database: 2,362,478 effective HSP length: 70 effective length of database: 2,012,198 effective search space used: 281707720 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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