Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0610
         (632 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding pr...    27   0.65 
AF387858-1|AAL58708.1|  209|Anopheles gambiae integrase protein.       25   2.0  
AF387857-1|AAL58707.1|  215|Anopheles gambiae integrase protein.       25   2.0  
U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase...    25   2.6  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    24   3.5  
AF387850-1|AAL58705.1|  209|Anopheles gambiae integrase protein.       24   3.5  
AJ304412-1|CAC39105.1|  196|Anopheles gambiae dynamin protein.         23   6.1  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   8.1  

>AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding
           protein AgamOBP45 protein.
          Length = 356

 Score = 26.6 bits (56), Expect = 0.65
 Identities = 18/71 (25%), Positives = 31/71 (43%)
 Frame = -2

Query: 217 CKVFTRPPSISGALVMSDTS*TVRPAFRSXLAVPPLAINCRPHSDRLFANESRPVLSETL 38
           C+V   PP+++     + T+ T   A  S        +NC+ +  RLF + +  V     
Sbjct: 286 CEVAVEPPAMTTTTTTTTTTPTTATACPSTTEFNYKELNCQ-NCGRLFISNNGRVSCCRC 344

Query: 37  RRASFPFDAMF 5
            ++S PF   F
Sbjct: 345 MKSSTPFGKFF 355


>AF387858-1|AAL58708.1|  209|Anopheles gambiae integrase protein.
          Length = 209

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 17/51 (33%), Positives = 23/51 (45%)
 Frame = -2

Query: 154 TVRPAFRSXLAVPPLAINCRPHSDRLFANESRPVLSETLRRASFPFDAMFC 2
           TVR + RS   VPP          R+F+NE   +  E     +F  +AM C
Sbjct: 159 TVRRSSRSTKGVPPQRFRETTGMVRIFSNERILITQEYCEPRTFE-EAMSC 208


>AF387857-1|AAL58707.1|  215|Anopheles gambiae integrase protein.
          Length = 215

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 17/51 (33%), Positives = 23/51 (45%)
 Frame = -2

Query: 154 TVRPAFRSXLAVPPLAINCRPHSDRLFANESRPVLSETLRRASFPFDAMFC 2
           TVR + RS   VPP          R+F+NE   +  E     +F  +AM C
Sbjct: 165 TVRRSSRSTKGVPPQRFRETTGMVRIFSNERILITQEYCEPRTFE-EAMSC 214


>U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 332

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = +2

Query: 140 RRPHSSRCVGHHESTGDARRSGENFTSSGTCWDLSSIIHSDQ 265
           RRP   R + HH      R + E+  +S   W  S II SD+
Sbjct: 106 RRPRKVRKLQHHHVEARIRFAEEHLAASIFWW--SKIIFSDE 145


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 17/51 (33%), Positives = 22/51 (43%)
 Frame = -2

Query: 154 TVRPAFRSXLAVPPLAINCRPHSDRLFANESRPVLSETLRRASFPFDAMFC 2
           TVR + RS   VPP          R+F NE   +  E     +F  +AM C
Sbjct: 389 TVRRSSRSTKGVPPQRFRETTGMVRIFLNERILITQEYCEPRTFE-EAMSC 438


>AF387850-1|AAL58705.1|  209|Anopheles gambiae integrase protein.
          Length = 209

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 17/51 (33%), Positives = 22/51 (43%)
 Frame = -2

Query: 154 TVRPAFRSXLAVPPLAINCRPHSDRLFANESRPVLSETLRRASFPFDAMFC 2
           TVR + RS   VPP          R+F NE   +  E     +F  +AM C
Sbjct: 159 TVRRSSRSTKGVPPQRFRETTGMVRIFLNERILITQEYCEPRTFE-EAMSC 208


>AJ304412-1|CAC39105.1|  196|Anopheles gambiae dynamin protein.
          Length = 196

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +3

Query: 543 VHSYFRTMTSPYSDLLPQAIL 605
           V SY R +T    D++P+AI+
Sbjct: 105 VESYMRIVTKTTRDMVPKAIM 125


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = -2

Query: 154 TVRPAFRSXLAVPPLAINCRPHSDRLFANESRPVLSETLRRA 29
           T RPA+    A+  L   CR    R  A+ + P +S   R+A
Sbjct: 290 TGRPAYWCTPAIEELENECRIAEQRQLASPTDPDISALDRQA 331



 Score = 23.0 bits (47), Expect = 8.1
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +2

Query: 98  AVDCQWRYRQXASERRPHSSRCV 166
           A D QW  R  AS +RP + R V
Sbjct: 801 ATDRQWCQRMLASFQRPLAQRVV 823


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 576,035
Number of Sequences: 2352
Number of extensions: 10704
Number of successful extensions: 23
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61886940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)