Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0609
         (661 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    22   3.9  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    22   5.1  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   6.8  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   9.0  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +1

Query: 175 PVPYPVEKHVPYPVKVAVPQP 237
           PVP PVE+    P     P P
Sbjct: 392 PVPQPVEEVTQKPSSTKAPAP 412


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = +2

Query: 107 DIPTSPRPSPSSKASLYLTPSTDPFHTQLRSTCLIPSR 220
           +IP+  R SP     + ++P+T P  +      L PS+
Sbjct: 76  EIPSPKRSSPILAEKVSVSPTTPPTPSPPPEERLTPSK 113


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +2

Query: 566 PVHVPALNPVEKPVPFVS 619
           P   P  +PV KPV F S
Sbjct: 38  PKPAPIYSPVSKPVSFES 55


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/14 (50%), Positives = 7/14 (50%)
 Frame = +1

Query: 436 CPNLTPWRNTCHTP 477
           C N  PW N C  P
Sbjct: 315 CFNAKPWSNYCVEP 328


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,357
Number of Sequences: 336
Number of extensions: 2962
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)