Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0609
(661 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U46675-2|AAB52644.1| 125|Caenorhabditis elegans Hypothetical pr... 38 0.008
U28731-8|AAA68300.2| 113|Caenorhabditis elegans Hypothetical pr... 36 0.019
Z68314-1|CAA92658.1| 102|Caenorhabditis elegans Hypothetical pr... 36 0.025
U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog (hedg... 35 0.045
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 34 0.078
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 34 0.078
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 34 0.078
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 32 0.41
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 32 0.41
U39850-2|AAA81056.1| 451|Caenorhabditis elegans Hypothetical pr... 31 0.96
DQ641631-1|ABG29106.1| 451|Caenorhabditis elegans sex determini... 31 0.96
AF099916-2|AAC68776.1| 1145|Caenorhabditis elegans Hypothetical ... 31 0.96
Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical pr... 30 1.3
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 30 1.3
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical p... 30 1.7
Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical pr... 30 1.7
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist... 30 1.7
U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical pr... 30 1.7
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele... 30 1.7
AF039050-14|AAC47928.1| 69|Caenorhabditis elegans Neuropeptide... 30 1.7
Z96047-4|CAB09414.1| 796|Caenorhabditis elegans Hypothetical pr... 29 2.2
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 29 2.2
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 29 2.2
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 29 2.2
AC084197-3|AAN63427.1| 173|Caenorhabditis elegans Histone h1 li... 29 2.2
AC084197-2|AAM44399.1| 241|Caenorhabditis elegans Histone h1 li... 29 2.2
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 29 2.2
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 29 2.9
U46753-7|AAA85763.2| 223|Caenorhabditis elegans Hypothetical pr... 29 2.9
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 29 2.9
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 29 2.9
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 29 2.9
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 29 2.9
Z81017-3|CAB54257.1| 629|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z81017-2|CAB02672.1| 578|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z81017-1|CAB02669.1| 592|Caenorhabditis elegans Hypothetical pr... 29 3.9
U80221-1|AAB38367.1| 579|Caenorhabditis elegans F58A3.1b protein. 29 3.9
U80220-1|AAB38366.1| 592|Caenorhabditis elegans F58A3.1a protein. 29 3.9
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 29 3.9
AF039050-13|AAC47927.1| 75|Caenorhabditis elegans Neuropeptide... 29 3.9
Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical pr... 28 5.1
U28731-7|AAA68294.2| 120|Caenorhabditis elegans Hypothetical pr... 28 5.1
AF039050-16|AAC47932.1| 65|Caenorhabditis elegans Neuropeptide... 28 5.1
AF039050-15|AAC47929.1| 73|Caenorhabditis elegans Neuropeptide... 28 5.1
Z66521-5|CAA91399.1| 312|Caenorhabditis elegans Hypothetical pr... 28 6.8
U80952-2|AAB38094.1| 309|Caenorhabditis elegans Muscle attachme... 28 6.8
U80952-1|AAU20846.1| 315|Caenorhabditis elegans Muscle attachme... 28 6.8
U58762-4|AAK39303.1| 109|Caenorhabditis elegans Hypothetical pr... 28 6.8
AL033536-3|CAA22142.1| 1564|Caenorhabditis elegans Hypothetical ... 28 6.8
AC006762-2|AAF60558.2| 607|Caenorhabditis elegans Hypothetical ... 28 6.8
Z92807-2|CAD21652.1| 689|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z92807-1|CAB07264.1| 747|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z81568-3|CAB04592.1| 643|Caenorhabditis elegans Hypothetical pr... 27 8.9
U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical p... 27 8.9
U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conju... 27 8.9
AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical... 27 8.9
AF039052-4|AAF98630.1| 981|Caenorhabditis elegans Proteasome re... 27 8.9
AB039949-1|BAC06512.1| 747|Caenorhabditis elegans kinesin protein. 27 8.9
AB017164-1|BAA32661.1| 689|Caenorhabditis elegans Kinesin like ... 27 8.9
>U46675-2|AAB52644.1| 125|Caenorhabditis elegans Hypothetical
protein F35A5.5 protein.
Length = 125
Score = 37.5 bits (83), Expect = 0.008
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +1
Query: 148 VPVPYAVDRPVPYPVEKHVPYPVKVAVPQPYEVVKQC 258
VPVP V +PVP P+ +P P+ + VP P V C
Sbjct: 13 VPVPAPVPQPVPVPMPMPMPMPMPMPVPVPVPVQSNC 49
Score = 32.7 bits (71), Expect = 0.24
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 148 VPVPYAVDRPVPYPVEKHVPYPVKVAVPQP 237
+P+P PVP PV + VP P+ + +P P
Sbjct: 5 IPIPIPAPVPVPAPVPQPVPVPMPMPMPMP 34
Score = 32.7 bits (71), Expect = 0.24
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 148 VPVPYAVDRPVPYPVEKHVPYPVKVAVPQPYEV 246
+P P V PVP PV +P P+ + +P P V
Sbjct: 9 IPAPVPVPAPVPQPVPVPMPMPMPMPMPMPVPV 41
Score = 31.5 bits (68), Expect = 0.55
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +1
Query: 148 VPVPYAVDRPVPYPVEKHVPYPVKVAVPQP 237
+P P + P P PV VP PV V +P P
Sbjct: 1 MPPPIPIPIPAPVPVPAPVPQPVPVPMPMP 30
>U28731-8|AAA68300.2| 113|Caenorhabditis elegans Hypothetical
protein F12A10.7 protein.
Length = 113
Score = 36.3 bits (80), Expect = 0.019
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +1
Query: 19 GYIGHGQGLGGAYNYVDGGYSSGYGLNFGGH 111
GY G+G G GG Y GGY GYG +GG+
Sbjct: 61 GYGGYGGGYGGGYG---GGYGGGYGGRYGGN 88
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/33 (45%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = +1
Query: 13 EVGYIGHGQGLG-GAYNYVDGGYSSGYGLNFGG 108
E Y G G G G Y GGY GYG +GG
Sbjct: 47 EKRYGGWGGGYPYGGYGGYGGGYGGGYGGGYGG 79
>Z68314-1|CAA92658.1| 102|Caenorhabditis elegans Hypothetical
protein F07H5.6 protein.
Length = 102
Score = 35.9 bits (79), Expect = 0.025
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 19 GY-IGHGQGLGGAYNYVDGGYSSGYGLNFGGH 111
GY +G G G GG + GGY GYG FGG+
Sbjct: 27 GYGLGLGLGCGGGFGGFSGGYGLGYGGGFGGY 58
Score = 34.3 bits (75), Expect = 0.078
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +1
Query: 19 GYIGHGQGLGGAYNYVDGGYSSGYGLNFGG 108
G+ G+G GLG GG+S GYGL +GG
Sbjct: 24 GFGGYGLGLGLGCGGGFGGFSGGYGLGYGG 53
Score = 31.9 bits (69), Expect = 0.41
Identities = 17/33 (51%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +1
Query: 19 GY-IGHGQGLGGAYNYVDGGYS-SGYGLNFGGH 111
GY +G+G G GG Y GGY GYGL +GG+
Sbjct: 46 GYGLGYGGGFGG-YGGGFGGYGLGGYGLGYGGY 77
>U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 6 protein.
Length = 559
Score = 35.1 bits (77), Expect = 0.045
Identities = 41/149 (27%), Positives = 54/149 (36%)
Frame = +2
Query: 116 TSPRPSPSSKASLYLTPSTDPFHTQLRSTCLIPSR*PCPNPTRSSNSAISREGVR*GSRP 295
T P +PS+ Y+ P+T T+ +T I + T +A + + SRP
Sbjct: 249 TRPYVAPSTTTQRYIEPTTQRPTTRRATTKRITTTTTAAPTTPRLTTARATTPLATTSRP 308
Query: 296 RSRAIPSRKEGALSRTRTS*QALPRQGARAPALPSREARPLPRQGSSAPTLPRGETRAIP 475
+ PS R T P RAP PS R R + APT PR T P
Sbjct: 309 TT---PSP---TTPRATTPLATTPLATTRAPLPPSPPPRTSKRPVTQAPTTPRATTTRRP 362
Query: 476 RRS*GARTAALPRCEARRCPRQGARSTGP 562
T PR RR R + P
Sbjct: 363 -------TTTTPRPTPRRTRRPKTTTAAP 384
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 34.3 bits (75), Expect = 0.078
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +2
Query: 110 IPTSPRPSPSSKASLYLTPSTDPFHTQLRSTCLIPSR*PCPN-PTRSSNSAISREG 274
+P+S P PSS++ T ST P T +S PS P + PT SS S I+ EG
Sbjct: 383 VPSSSSPQPSSQSPAPNTGSTTPSQTSSQSPS--PSMNPSSSTPTGSSQSTITPEG 436
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 34.3 bits (75), Expect = 0.078
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +2
Query: 110 IPTSPRPSPSSKASLYLTPSTDPFHTQLRSTCLIPSR*PCPN-PTRSSNSAISREG 274
+P+S P PSS++ T ST P T +S PS P + PT SS S I+ EG
Sbjct: 590 VPSSSSPQPSSQSPAPNTGSTTPSQTSSQSPS--PSMNPSSSTPTGSSQSTITPEG 643
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 34.3 bits (75), Expect = 0.078
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +2
Query: 110 IPTSPRPSPSSKASLYLTPSTDPFHTQLRSTCLIPSR*PCPN-PTRSSNSAISREG 274
+P+S P PSS++ T ST P T +S PS P + PT SS S I+ EG
Sbjct: 590 VPSSSSPQPSSQSPAPNTGSTTPSQTSSQSPS--PSMNPSSSTPTGSSQSTITPEG 643
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 31.9 bits (69), Expect = 0.41
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +2
Query: 113 PTSPRPSP-SSKASLYLTPSTDPFHTQLRSTCLIPSR*PCPNPT 241
P+ P +P S AS Y TP+ P T++ S L P+R P P P+
Sbjct: 537 PSFPSSAPIGSGASSYSTPAAPPPPTRVESHGLAPARPPPPPPS 580
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 31.9 bits (69), Expect = 0.41
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +2
Query: 113 PTSPRPSP-SSKASLYLTPSTDPFHTQLRSTCLIPSR*PCPNPT 241
P+ P +P S AS Y TP+ P T++ S L P+R P P P+
Sbjct: 363 PSFPSSAPIGSGASSYSTPAAPPPPTRVESHGLAPARPPPPPPS 406
>U39850-2|AAA81056.1| 451|Caenorhabditis elegans Hypothetical
protein F52C9.7 protein.
Length = 451
Score = 30.7 bits (66), Expect = 0.96
Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 5/105 (4%)
Frame = +2
Query: 242 RSSNSAISREGVR*GSRPRSRAIPSRKEGALSRTRTS*QALPRQGARAPALPSREARPLP 421
RSS+S+ R + R P R+ + R ++ R+ R+P E+R L
Sbjct: 137 RSSSSSDESSDERVERKRRRSPSPKRRRRPSEKPRKRSRSPRRERPRSPKRSREESRKLS 196
Query: 422 RQGSS----APTLPRGETRAIPRRS*GARTAALPRCEAR-RCPRQ 541
R+ SS +P R + R + R+ +R+ + R + R PR+
Sbjct: 197 RKPSSSRSKSPRRSREDPRKVARKPSRSRSRSAERLRRKSRSPRR 241
>DQ641631-1|ABG29106.1| 451|Caenorhabditis elegans sex determining
protein MOG-3 protein.
Length = 451
Score = 30.7 bits (66), Expect = 0.96
Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 5/105 (4%)
Frame = +2
Query: 242 RSSNSAISREGVR*GSRPRSRAIPSRKEGALSRTRTS*QALPRQGARAPALPSREARPLP 421
RSS+S+ R + R P R+ + R ++ R+ R+P E+R L
Sbjct: 137 RSSSSSDESSDERVERKRRRSPSPKRRRRPSEKPRKRSRSPRRERPRSPKRSREESRKLS 196
Query: 422 RQGSS----APTLPRGETRAIPRRS*GARTAALPRCEAR-RCPRQ 541
R+ SS +P R + R + R+ +R+ + R + R PR+
Sbjct: 197 RKPSSSRSKSPRRSREDPRKVARKPSRSRSRSAERLRRKSRSPRR 241
>AF099916-2|AAC68776.1| 1145|Caenorhabditis elegans Hypothetical
protein F54C4.3 protein.
Length = 1145
Score = 30.7 bits (66), Expect = 0.96
Identities = 21/90 (23%), Positives = 40/90 (44%)
Frame = +2
Query: 362 LPRQGARAPALPSREARPLPRQGSSAPTLPRGETRAIPRRS*GARTAALPRCEARRCPRQ 541
LPR +R +P+R+ + L ++ P R TR++ R +R E R CP +
Sbjct: 950 LPRSPSRRIRIPTRKIQELDQESVLPPPPRRETTRSVVR----SRKRRDRFAELRDCPPE 1005
Query: 542 GARSTGPYPVHVPALNPVEKPVPFVSQFEK 631
R+ + + ++P+ +V + K
Sbjct: 1006 VMRAIAAHAIAYDGRKKEQRPIVYVPRQAK 1035
>Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical
protein B0393.4 protein.
Length = 803
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 148 VPVPYAVDRPVPYPVEKHVPYPVKVAVP 231
+PVP V PVP PV + P P+ +P
Sbjct: 112 LPVPEPVPEPVPEPVPESTPEPISEPLP 139
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1
Query: 163 AVDRPVPYPVEKHVPYPVKVAVPQP 237
AV PVP PV + VP PV + P+P
Sbjct: 109 AVTLPVPEPVPEPVPEPVPESTPEP 133
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +1
Query: 181 PYPVEKHVPYPVKVAVPQPYEV 246
P PV +HVP PV V VP P V
Sbjct: 149 PQPVIQHVPVPVPVQVPVPIRV 170
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 136 LVKGVPVPYAVDRPVPYPVEKHVPYPVKVAVPQP-YEVVKQC 258
+++ VPVP V VP P+ VP PV V QP Y V C
Sbjct: 152 VIQHVPVPVPVQ--VPVPIRVPVPVPVPTPVYQPTYCAVPPC 191
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 157 PYAVDRPVPYPVEKHVPYPVKVAVPQP 237
P V + VP PV VP P++V VP P
Sbjct: 149 PQPVIQHVPVPVPVQVPVPIRVPVPVP 175
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 28 GHGQGLGGAYNYVDGGYSSGYGLNFGGHT 114
G+ GG Y +GGY GYG +GG++
Sbjct: 10 GYNSSSGGGY---EGGYGGGYGGGYGGYS 35
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 29.9 bits (64), Expect = 1.7
Identities = 32/120 (26%), Positives = 47/120 (39%), Gaps = 3/120 (2%)
Frame = +2
Query: 212 PSR*PCPNPTR---SSNSAISREGVR*GSRPRSRAIPSRKEGALSRTRTS*QALPRQGAR 382
PS P P R S + + S R SR +S P+R+ + S +++ A R +R
Sbjct: 308 PSASKSPPPARRRRSPSQSKSPAPKRAKSRSKSPPAPARRRRSPSASKSPPPAPKRAKSR 367
Query: 383 APALPSREARPLPRQGSSAPTLPRGETRAIPRRS*GARTAALPRCEARRCPRQGARSTGP 562
+ + P+R R S +P PR RS A +P RR P P
Sbjct: 368 SKSPPARRRR--SPSASKSPPAPRRRRSPSKSRS-PAPKREIPPARRRRSPSASKSPPAP 424
Score = 27.9 bits (59), Expect = 6.8
Identities = 39/144 (27%), Positives = 51/144 (35%)
Frame = +2
Query: 119 SPRPSPSSKASLYLTPSTDPFHTQLRSTCLIPSR*PCPNPTRSSNSAISREGVR*GSRPR 298
SP P+P S S P + RS S P P RS + + S R R
Sbjct: 356 SPPPAPKRAKSR----SKSPPARRRRSPSASKSP-PAPRRRRSPSKSRSPAPKREIPPAR 410
Query: 299 SRAIPSRKEGALSRTRTS*QALPRQGARAPALPSREARPLPRQGSSAPTLPRGETRAIPR 478
R PS + + R ++ R PS+ P PR+ S P+ R R
Sbjct: 411 RRRSPSASKSPPAPKRAKSRSKSPPAPRRRRSPSQSKSPAPRRRRSPSKSPQAPRR---R 467
Query: 479 RS*GARTAALPRCEARRCPRQGAR 550
RS + PR RR P R
Sbjct: 468 RSPSGSKSRSPR--RRRSPAAAPR 489
>Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical
protein K08E7.5c protein.
Length = 896
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +2
Query: 113 PTSPRPSPSSKASLYLTPSTDPFHTQLRSTCLIPSR*PCPNPTRSSN 253
P +P P SS + +++ S D S+ L+P + P NP+ S++
Sbjct: 255 PPAPSPQESSTITHHVSTSPDFLEPSSESSVLLPKQAPGTNPSTSNS 301
>Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical
protein K08E7.5a protein.
Length = 1221
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +2
Query: 113 PTSPRPSPSSKASLYLTPSTDPFHTQLRSTCLIPSR*PCPNPTRSSN 253
P +P P SS + +++ S D S+ L+P + P NP+ S++
Sbjct: 580 PPAPSPQESSTITHHVSTSPDFLEPSSESSVLLPKQAPGTNPSTSNS 626
>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
protein 1 protein.
Length = 1852
Score = 29.9 bits (64), Expect = 1.7
Identities = 31/117 (26%), Positives = 46/117 (39%)
Frame = +2
Query: 113 PTSPRPSPSSKASLYLTPSTDPFHTQLRSTCLIPSR*PCPNPTRSSNSAISREGVR*GSR 292
P+SP+ SPSS +PS P Q T P P +PT + +S +
Sbjct: 1718 PSSPKYSPSSPTYSPTSPSYSPTSPQYSPTS--PQYSP-SSPTYTPSSPTYNP-----TS 1769
Query: 293 PRSRAIPSRKEGALSRTRTS*QALPRQGARAPALPSREARPLPRQGSSAPTLPRGET 463
PR + P + + + TS P +P P+ P + G+SA P T
Sbjct: 1770 PRGFSSPQYSPTSPTYSPTSPSYTPSSPQYSPTSPTYTPSPSEQPGTSAQYSPTSPT 1826
>U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical
protein T26C11.2 protein.
Length = 343
Score = 29.9 bits (64), Expect = 1.7
Identities = 34/170 (20%), Positives = 55/170 (32%)
Frame = +2
Query: 125 RPSPSSKASLYLTPSTDPFHTQLRSTCLIPSR*PCPNPTRSSNSAISREGVR*GSRPRSR 304
+P P K L+ P L P P P P S S P+ +
Sbjct: 55 KPKPFPKPMLFPKPMPKHKPKPFPKPMLFPKPMPFPKPMPKSKPK-SEPFPNPMPFPKPK 113
Query: 305 AIPSRKEGALSRTRTS*QALPRQGARAPALPSREARPLPRQGSSAPTLPRGETRAIPRRS 484
+P K + + +P P +P+P + P+ E P
Sbjct: 114 PMPKHKPKPFPKPMLFPKPMPIPKPMPFPKPMLFPKPMPFPKPMPKSKPKSEP--FPNPM 171
Query: 485 *GARTAALPRCEARRCPRQGARSTGPYPVHVPALNPVEKPVPFVSQFEKP 634
+ P+ + + P+ + P P+ P P+ KP+PF KP
Sbjct: 172 PFPKPMPKPKPKPKPMPKHKPKPF-PKPMLFPKPMPIPKPMPFPKPMPKP 220
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +1
Query: 151 PVPYAVDRPVPYPVEKHVPYPVKVAVPQPYEVVK 252
P+P+ P P P K P+P + P+P + K
Sbjct: 210 PMPFPKPMPKPMPKHKPKPFPKPMLFPKPMPIPK 243
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = +1
Query: 142 KGVPVPYAVDRPVPYPVEKHVPYPVKVAVPQPYEVVKQCHIT*RSTLRFPSTFP 303
K P P + P P P+ K +P+P + P+P K + + FP+ P
Sbjct: 119 KPKPFPKPMLFPKPMPIPKPMPFPKPMLFPKPMPFPKPMPKSKPKSEPFPNPMP 172
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/52 (26%), Positives = 20/52 (38%)
Frame = +1
Query: 151 PVPYAVDRPVPYPVEKHVPYPVKVAVPQPYEVVKQCHIT*RSTLRFPSTFPR 306
P P +P P P K P+P + P+P + K P FP+
Sbjct: 104 PNPMPFPKPKPMPKHKPKPFPKPMLFPKPMPIPKPMPFPKPMLFPKPMPFPK 155
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +1
Query: 151 PVPYAVDRPVPYPVEKHVPYPVKVAVPQPYEVVK 252
P+P +P P P K P+P + P+P + K
Sbjct: 176 PMPKPKPKPKPMPKHKPKPFPKPMLFPKPMPIPK 209
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/41 (26%), Positives = 19/41 (46%)
Frame = +1
Query: 118 VTKTITLVKGVPVPYAVDRPVPYPVEKHVPYPVKVAVPQPY 240
+ K + K +P P +P P+P P P+ + P P+
Sbjct: 207 IPKPMPFPKPMPKPMPKHKPKPFPKPMLFPKPMPIPKPMPF 247
>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.elegans
RNA polymeraseII largest subunit (ama-1 IV) gene,
complete cds. ).
Length = 1859
Score = 29.9 bits (64), Expect = 1.7
Identities = 31/117 (26%), Positives = 46/117 (39%)
Frame = +2
Query: 113 PTSPRPSPSSKASLYLTPSTDPFHTQLRSTCLIPSR*PCPNPTRSSNSAISREGVR*GSR 292
P+SP+ SPSS +PS P Q T P P +PT + +S +
Sbjct: 1725 PSSPKYSPSSPTYSPTSPSYSPTSPQYSPTS--PQYSP-SSPTYTPSSPTYNP-----TS 1776
Query: 293 PRSRAIPSRKEGALSRTRTS*QALPRQGARAPALPSREARPLPRQGSSAPTLPRGET 463
PR + P + + + TS P +P P+ P + G+SA P T
Sbjct: 1777 PRGFSSPQYSPTSPTYSPTSPSYTPSSPQYSPTSPTYTPSPSEQPGTSAQYSPTSPT 1833
>AF039050-14|AAC47928.1| 69|Caenorhabditis elegans
Neuropeptide-like protein protein30 protein.
Length = 69
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = +1
Query: 19 GYIGHGQGLGG--AYNYVDGGYSSGYG 93
GY G+G+G GG Y GGY GYG
Sbjct: 25 GYGGYGRGYGGYGGYGRGYGGYGRGYG 51
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +1
Query: 19 GYIGHGQGLGGAYNYVDGGYSSG-YGLNFGGH 111
GY G+G+G GG Y GGY G +G +GG+
Sbjct: 35 GYGGYGRGYGG-YGRGYGGYGRGMWGRPYGGY 65
>Z96047-4|CAB09414.1| 796|Caenorhabditis elegans Hypothetical
protein DY3.5 protein.
Length = 796
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +1
Query: 97 NFGGHTDVTKTITLVKGVPVPYAVDRPVPYPVEKHVPYPVKVAVPQPYEVVKQ 255
N GG+ ++ + VP Y + P P + + YP VA PQP ++ +Q
Sbjct: 334 NAGGY-QTSQQQQVANQVPQTYGQSQQPP-PTQTYSGYPQNVAQPQPQQIAQQ 384
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 29.5 bits (63), Expect = 2.2
Identities = 33/100 (33%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Frame = +2
Query: 239 TRSSNSAISREGVR*GSRPRSRAIPSRKEGALSRTRTS*QALPRQGARAPA-LPSREARP 415
+RSS+S+ S R R P+R G SR+ + P +GARA P R +
Sbjct: 34 SRSSSSSSSGRSRSRSPRRRDTRPPAR--GGRSRSPIR-RGSPPRGARADRDRPMRPSPS 90
Query: 416 LPRQGSSAPTLPRGETR----------AIPRRS*GARTAA 505
PR+ +P+ PR + R A PRRS AR+A+
Sbjct: 91 PPRRRRPSPSPPRRDRRDRSGSRQRRRASPRRSPAARSAS 130
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 29.5 bits (63), Expect = 2.2
Identities = 26/88 (29%), Positives = 35/88 (39%)
Frame = +2
Query: 305 AIPSRKEGALSRTRTS*QALPRQGARAPALPSREARPLPRQGSSAPTLPRGETRAIPRRS 484
AIP + + + + T A P +AP P +A P P Q AP P P+
Sbjct: 576 AIPEKMDTSEAATA----ARPPSTPQAPQAPPVQAAPAPVQAPQAPQAP-------PQAY 624
Query: 485 *GARTAALPRCEARRCPRQGARSTGPYP 568
G P +A R P Q + PYP
Sbjct: 625 QGYGGPGGPPQQAYRYPPQQGQQYSPYP 652
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 29.5 bits (63), Expect = 2.2
Identities = 26/88 (29%), Positives = 35/88 (39%)
Frame = +2
Query: 305 AIPSRKEGALSRTRTS*QALPRQGARAPALPSREARPLPRQGSSAPTLPRGETRAIPRRS 484
AIP + + + + T A P +AP P +A P P Q AP P P+
Sbjct: 576 AIPEKMDTSEAATA----ARPPSTPQAPQAPPVQAAPAPVQAPQAPQAP-------PQAY 624
Query: 485 *GARTAALPRCEARRCPRQGARSTGPYP 568
G P +A R P Q + PYP
Sbjct: 625 QGYGGPGGPPQQAYRYPPQQGQQYSPYP 652
>AC084197-3|AAN63427.1| 173|Caenorhabditis elegans Histone h1 like
protein 2, isoformb protein.
Length = 173
Score = 29.5 bits (63), Expect = 2.2
Identities = 24/82 (29%), Positives = 31/82 (37%), Gaps = 3/82 (3%)
Frame = +1
Query: 1 GIRHEVGYIGHGQGLGGAYNYVDGGYSSGYGLNF--GGHTDVTKTITLVKGVPVPYAVDR 174
G+ HE GY+ G G Y GGYS + + F H +T+ + V
Sbjct: 12 GVEHETGYVSRQSGRGRVYK--GGGYSP-FTITFQVSTHRSTMSDVTVAETPAVKTPTKA 68
Query: 175 PVPYPVEKHVPYP-VKVAVPQP 237
P P K P KVA P
Sbjct: 69 P-KAPKSKTTKEPKAKVAAAHP 89
>AC084197-2|AAM44399.1| 241|Caenorhabditis elegans Histone h1 like
protein 2, isoforma protein.
Length = 241
Score = 29.5 bits (63), Expect = 2.2
Identities = 24/82 (29%), Positives = 31/82 (37%), Gaps = 3/82 (3%)
Frame = +1
Query: 1 GIRHEVGYIGHGQGLGGAYNYVDGGYSSGYGLNF--GGHTDVTKTITLVKGVPVPYAVDR 174
G+ HE GY+ G G Y GGYS + + F H +T+ + V
Sbjct: 12 GVEHETGYVSRQSGRGRVYK--GGGYSP-FTITFQVSTHRSTMSDVTVAETPAVKTPTKA 68
Query: 175 PVPYPVEKHVPYP-VKVAVPQP 237
P P K P KVA P
Sbjct: 69 P-KAPKSKTTKEPKAKVAAAHP 89
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +1
Query: 151 PVPYAVDRPVPYPVEKHVPYPVKVAVPQPYE 243
P+P P P P E P P+ PQP E
Sbjct: 1763 PLPPVQPLPQPQPTEPEEPLPIATPAPQPTE 1793
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 29.1 bits (62), Expect = 2.9
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +2
Query: 242 RSSNSAISREGVR*GSRP-RSRAIPSRKEGALSRTRTS*QALPRQGARAPALPSREARPL 418
RS + + SR R S P RSR K + SR+R++ R +R+P R P
Sbjct: 225 RSRSRSSSRSKSRSRSPPKRSRRESKSKSRSRSRSRSADNRKSRSPSRSPKKVDRS--PS 282
Query: 419 PRQGSSAPTLPRGETRAIPRRS 484
P +GS +P+ + PRRS
Sbjct: 283 PPRGSRSPS-----EKGSPRRS 299
>U46753-7|AAA85763.2| 223|Caenorhabditis elegans Hypothetical
protein C34F11.8 protein.
Length = 223
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = +1
Query: 19 GYIGHGQGLGGAYNYVDGGYSSGYGL 96
GY G+G G GG Y GGY G GL
Sbjct: 168 GYSGYGGGYGGGYG---GGYGYGGGL 190
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +1
Query: 142 KGVPVPYAVDRPVPYPVEKHVPYPVK-VAVPQPYEVVKQCHIT 267
K VPVP V VEKH P K + QP E+V+Q +T
Sbjct: 4662 KDVPVPETSAPTVEPTVEKHTPVESKEKSEVQPAEIVEQKDVT 4704
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +1
Query: 142 KGVPVPYAVDRPVPYPVEKHVPYPVK-VAVPQPYEVVKQ 255
K VPVP V VEKH P K + QP E+V+Q
Sbjct: 5140 KDVPVPETSAPTVEPTVEKHAPVESKETSEVQPAEIVEQ 5178
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +1
Query: 142 KGVPVPYAVDRPVPYPVEKHVPYPVK-VAVPQPYEVVKQ 255
K VPVP V VEKH P K + QP E+V+Q
Sbjct: 5481 KDVPVPETSAPTVEPTVEKHAPVESKETSEVQPAEIVEQ 5519
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +1
Query: 142 KGVPVPYAVDRPVPYPVEKHVPYPVK-VAVPQPYEVVKQCHIT 267
K VPVP V VEKH P K + QP E+V+Q +T
Sbjct: 4662 KDVPVPETSAPTVEPTVEKHTPVESKEKSEVQPAEIVEQKDVT 4704
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +1
Query: 142 KGVPVPYAVDRPVPYPVEKHVPYPVK-VAVPQPYEVVKQ 255
K VPVP V VEKH P K + QP E+V+Q
Sbjct: 5140 KDVPVPETSAPTVEPTVEKHAPVESKETSEVQPAEIVEQ 5178
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +1
Query: 142 KGVPVPYAVDRPVPYPVEKHVPYPVK-VAVPQPYEVVKQ 255
K VPVP V VEKH P K + QP E+V+Q
Sbjct: 5501 KDVPVPETSAPTVEPTVEKHAPVESKETSEVQPAEIVEQ 5539
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +1
Query: 142 KGVPVPYAVDRPVPYPVEKHVPYPVK-VAVPQPYEVVKQCHIT 267
K VPVP V VEKH P K + QP E+V+Q +T
Sbjct: 4662 KDVPVPETSAPTVEPTVEKHTPVESKEKSEVQPAEIVEQKDVT 4704
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +1
Query: 142 KGVPVPYAVDRPVPYPVEKHVPYPVK-VAVPQPYEVVKQ 255
K VPVP V VEKH P K + QP E+V+Q
Sbjct: 5140 KDVPVPETSAPTVEPTVEKHAPVESKETSEVQPAEIVEQ 5178
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +1
Query: 142 KGVPVPYAVDRPVPYPVEKHVPYPVK-VAVPQPYEVVKQ 255
K VPVP V VEKH P K + QP E+V+Q
Sbjct: 5501 KDVPVPETSAPTVEPTVEKHAPVESKETSEVQPAEIVEQ 5539
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/31 (51%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = +1
Query: 19 GYIGHGQGLGGAYNYVDGGY--SSGYGLNFG 105
GY G G G GG DGGY S GYG +G
Sbjct: 204 GYGGGGMGGGGYGGGGDGGYGPSGGYGGGYG 234
>Z81017-3|CAB54257.1| 629|Caenorhabditis elegans Hypothetical
protein F58A3.1c protein.
Length = 629
Score = 28.7 bits (61), Expect = 3.9
Identities = 27/104 (25%), Positives = 36/104 (34%)
Frame = +2
Query: 332 LSRTRTS*QALPRQGARAPALPSREARPLPRQGSSAPTLPRGETRAIPRRS*GARTAALP 511
+ RT + +Q R L + P P P R A R G++ A
Sbjct: 315 MKRTLFQHHQVRQQNMRQQQLNQQMMIPAPEPEKPKPARKRQRKPAANPR--GSKKATAA 372
Query: 512 RCEARRCPRQGARSTGPYPVHVPALNPVEKPVPFVSQFEKPSWP 643
A G T P PA N P P SQF++ S+P
Sbjct: 373 AAAAAAAATNGVPPT--VPTASPANNQQFPPNPMTSQFQQMSYP 414
>Z81017-2|CAB02672.1| 578|Caenorhabditis elegans Hypothetical
protein F58A3.1b protein.
Length = 578
Score = 28.7 bits (61), Expect = 3.9
Identities = 27/104 (25%), Positives = 36/104 (34%)
Frame = +2
Query: 332 LSRTRTS*QALPRQGARAPALPSREARPLPRQGSSAPTLPRGETRAIPRRS*GARTAALP 511
+ RT + +Q R L + P P P R A R G++ A
Sbjct: 264 MKRTLFQHHQVRQQNMRQQQLNQQMMIPAPEPEKPKPARKRQRKPAANPR--GSKKATAA 321
Query: 512 RCEARRCPRQGARSTGPYPVHVPALNPVEKPVPFVSQFEKPSWP 643
A G T P PA N P P SQF++ S+P
Sbjct: 322 AAAAAAAATNGVPPT--VPTASPANNQQFPPNPMTSQFQQMSYP 363
>Z81017-1|CAB02669.1| 592|Caenorhabditis elegans Hypothetical
protein F58A3.1a protein.
Length = 592
Score = 28.7 bits (61), Expect = 3.9
Identities = 27/104 (25%), Positives = 36/104 (34%)
Frame = +2
Query: 332 LSRTRTS*QALPRQGARAPALPSREARPLPRQGSSAPTLPRGETRAIPRRS*GARTAALP 511
+ RT + +Q R L + P P P R A R G++ A
Sbjct: 278 MKRTLFQHHQVRQQNMRQQQLNQQMMIPAPEPEKPKPARKRQRKPAANPR--GSKKATAA 335
Query: 512 RCEARRCPRQGARSTGPYPVHVPALNPVEKPVPFVSQFEKPSWP 643
A G T P PA N P P SQF++ S+P
Sbjct: 336 AAAAAAAATNGVPPT--VPTASPANNQQFPPNPMTSQFQQMSYP 377
>U80221-1|AAB38367.1| 579|Caenorhabditis elegans F58A3.1b protein.
Length = 579
Score = 28.7 bits (61), Expect = 3.9
Identities = 27/104 (25%), Positives = 36/104 (34%)
Frame = +2
Query: 332 LSRTRTS*QALPRQGARAPALPSREARPLPRQGSSAPTLPRGETRAIPRRS*GARTAALP 511
+ RT + +Q R L + P P P R A R G++ A
Sbjct: 265 MKRTLFQHHQVRQQNMRQQQLNQQMMIPAPEPEKPKPARKRQRKPAANPR--GSKKATAA 322
Query: 512 RCEARRCPRQGARSTGPYPVHVPALNPVEKPVPFVSQFEKPSWP 643
A G T P PA N P P SQF++ S+P
Sbjct: 323 AAAAAAAATNGVPPT--VPTASPANNQQFPPNPMTSQFQQMSYP 364
>U80220-1|AAB38366.1| 592|Caenorhabditis elegans F58A3.1a protein.
Length = 592
Score = 28.7 bits (61), Expect = 3.9
Identities = 27/104 (25%), Positives = 36/104 (34%)
Frame = +2
Query: 332 LSRTRTS*QALPRQGARAPALPSREARPLPRQGSSAPTLPRGETRAIPRRS*GARTAALP 511
+ RT + +Q R L + P P P R A R G++ A
Sbjct: 278 MKRTLFQHHQVRQQNMRQQQLNQQMMIPAPEPEKPKPARKRQRKPAANPR--GSKKATAA 335
Query: 512 RCEARRCPRQGARSTGPYPVHVPALNPVEKPVPFVSQFEKPSWP 643
A G T P PA N P P SQF++ S+P
Sbjct: 336 AAAAAAAATNGVPPT--VPTASPANNQQFPPNPMTSQFQQMSYP 377
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 28 GHGQGLGGAYNYVDGGYSSGYGLNFGG 108
G G G GG + +GG+ G G N+GG
Sbjct: 57 GGGGGGGGGFGGGNGGFGGGGGGNYGG 83
>AF039050-13|AAC47927.1| 75|Caenorhabditis elegans
Neuropeptide-like protein protein31 protein.
Length = 75
Score = 28.7 bits (61), Expect = 3.9
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 6/37 (16%)
Frame = +1
Query: 19 GYIGHGQGLGG--AYNYVDGGYS----SGYGLNFGGH 111
GY G+G+G GG Y GGY GYG +GG+
Sbjct: 35 GYGGYGRGYGGYGGYGRGYGGYGRGMYGGYGRPYGGY 71
>Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical
protein C36H8.1 protein.
Length = 418
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Frame = +1
Query: 151 PVPYAVDR---PVPYPVEKHVPYPVKVAVPQPYEV 246
P+P V++ PVP PVE+ P P V P P V
Sbjct: 202 PMPVPVEKAPEPVPAPVEQIAPPPAPVQDPAPAPV 236
>U28731-7|AAA68294.2| 120|Caenorhabditis elegans Hypothetical
protein F12A10.1 protein.
Length = 120
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +1
Query: 28 GHGQGLGGAYNYVDGGYSSGYGLNFGG 108
G+G G G Y+ GGY YG GG
Sbjct: 66 GYGGGYPGGYSGYGGGYPGMYGGGMGG 92
>AF039050-16|AAC47932.1| 65|Caenorhabditis elegans
Neuropeptide-like protein protein28 protein.
Length = 65
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 19 GYIGHGQGLGGAYNYVDGGYSSGYGLN-FGGH 111
GY G+G+G GG Y G Y GYG +GG+
Sbjct: 25 GYGGYGRGYGGYGGYGRGMY-GGYGRGMYGGY 55
>AF039050-15|AAC47929.1| 73|Caenorhabditis elegans
Neuropeptide-like protein protein29 protein.
Length = 73
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 19 GYIGHGQGLGGAYNYVDGGYSSGYGLN-FGGH 111
GY G+G+G GG Y G Y GYG +GG+
Sbjct: 25 GYGGYGRGYGGYGGYGRGMY-GGYGRGMYGGY 55
>Z66521-5|CAA91399.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.9 protein.
Length = 312
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +2
Query: 173 DPFHTQLRSTCLIPSR*PCPNPTRSSNSAISREG 274
D T+++S C P CP P S S + REG
Sbjct: 39 DSVKTRMQSLCPCPET-KCPTPVHSLMSIVKREG 71
>U80952-2|AAB38094.1| 309|Caenorhabditis elegans Muscle attachment
abnormal protein1, isoform a protein.
Length = 309
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +2
Query: 533 PRQGARSTGPYPVHVPALNPVEKPVPFVSQFEKPSWPYP 649
P GA+ P +HVP P +P F+ P P+P
Sbjct: 44 PNPGAKQFAP--IHVPGREPPRMLLPPTPHFQAPFSPHP 80
>U80952-1|AAU20846.1| 315|Caenorhabditis elegans Muscle attachment
abnormal protein1, isoform b protein.
Length = 315
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +2
Query: 533 PRQGARSTGPYPVHVPALNPVEKPVPFVSQFEKPSWPYP 649
P GA+ P +HVP P +P F+ P P+P
Sbjct: 50 PNPGAKQFAP--IHVPGREPPRMLLPPTPHFQAPFSPHP 86
>U58762-4|AAK39303.1| 109|Caenorhabditis elegans Hypothetical
protein T27F7.3b protein.
Length = 109
Score = 27.9 bits (59), Expect = 6.8
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +1
Query: 124 KTITLVKGVPVPYAVDRPVPYPVEKHVPYPVKVAVPQPYEVVK 252
KTIT V+G+ Y + R V Y +KH V P+ EV++
Sbjct: 38 KTITTVQGIGTEYDLKRIVQYLKKKHSCNGTIVEHPEYGEVIQ 80
>AL033536-3|CAA22142.1| 1564|Caenorhabditis elegans Hypothetical
protein Y53C10A.9 protein.
Length = 1564
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 119 SPRPSPSSKASLYLTPSTDPFHTQLRSTCLIPS 217
+P + SS S+ + ST+ FH + STC PS
Sbjct: 48 APEDAKSSGPSIDMMLSTESFHPTVSSTCQDPS 80
>AC006762-2|AAF60558.2| 607|Caenorhabditis elegans Hypothetical
protein Y42G9A.4a protein.
Length = 607
Score = 27.9 bits (59), Expect = 6.8
Identities = 22/72 (30%), Positives = 27/72 (37%), Gaps = 2/72 (2%)
Frame = +2
Query: 407 ARPLPRQGSSAPTLPRGETRAIPRRS*GARTAALPRCEARRCPRQGARSTGP--YPVHVP 580
A PLP G T A P +S +LP P GA+ST P +P P
Sbjct: 175 APPLPEGLHRTNLSVIGATSAQPEKSEAEIALSLPVPPLTPLPSPGAQSTAPPVFPTSTP 234
Query: 581 ALNPVEKPVPFV 616
P P P +
Sbjct: 235 --TPTSTPTPLL 244
>Z92807-2|CAD21652.1| 689|Caenorhabditis elegans Hypothetical
protein K11D9.1b protein.
Length = 689
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +2
Query: 113 PTSPRPSPSSKASLYLTPSTDPFHTQLRSTCLIPSR*PCPNP 238
P S R + + K L T T P HT R+ + P+ P P P
Sbjct: 154 PKSTRTTAAFKPDLDSTAITVPKHTARRTVVVAPAPAPVPAP 195
>Z92807-1|CAB07264.1| 747|Caenorhabditis elegans Hypothetical
protein K11D9.1a protein.
Length = 747
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +2
Query: 113 PTSPRPSPSSKASLYLTPSTDPFHTQLRSTCLIPSR*PCPNP 238
P S R + + K L T T P HT R+ + P+ P P P
Sbjct: 212 PKSTRTTAAFKPDLDSTAITVPKHTARRTVVVAPAPAPVPAP 253
>Z81568-3|CAB04592.1| 643|Caenorhabditis elegans Hypothetical
protein K08E3.4 protein.
Length = 643
Score = 27.5 bits (58), Expect = 8.9
Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 3/54 (5%)
Frame = +2
Query: 503 ALPRCEARRCPRQGARSTGPYPVHV---PALNPVEKPVPFVSQFEKPSWPYPVH 655
A P E P A PVH PA+ PV P + SQ++ P P H
Sbjct: 483 APPPPEPTPAPSHYASQYDAPPVHESFEPAVPPVSAPSHYASQYDAPPEPIDSH 536
>U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical
protein C34D4.14 protein.
Length = 2761
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = -2
Query: 207 RHVLLNWVWNGSVDGVRYRDAFDEGD--GLGDVG 112
R L NW+ GSVD R+ + D GLG+ G
Sbjct: 1325 RSALRNWMLQGSVDAKRWENVIVHTDDKGLGEPG 1358
>U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein6 protein.
Length = 314
Score = 27.5 bits (58), Expect = 8.9
Identities = 22/113 (19%), Positives = 42/113 (37%)
Frame = +2
Query: 296 RSRAIPSRKEGALSRTRTS*QALPRQGARAPALPSREARPLPRQGSSAPTLPRGETRAIP 475
++ +P ++G L +T + + + ++ +E Q + T P ET ++P
Sbjct: 157 KTALLPITEDGQLKQTEEAKTLAAQLKFQDESVVKKEVEAANNQKNPTETEPSEETSSVP 216
Query: 476 RRS*GARTAALPRCEARRCPRQGARSTGPYPVHVPALNPVEKPVPFVSQFEKP 634
+ + E S+ V PA+ P+ P P V Q P
Sbjct: 217 TEN--VEESEEDADEREEGTTVNVNSSEVPDVAQPAVQPIRDPQPLVFQHHAP 267
>AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical
protein Y59A8B.1a protein.
Length = 1641
Score = 27.5 bits (58), Expect = 8.9
Identities = 31/106 (29%), Positives = 43/106 (40%), Gaps = 7/106 (6%)
Frame = +2
Query: 356 QALPRQGARAPALPSREARPLPRQGSSAPTLPRGETRAI--PRRS*GARTAALPRCEARR 529
+A G P S P+PR+ A + R A R+S G R A + +
Sbjct: 630 RAASMAGIPPPPPTSSRHSPVPRREDRAEFMARSTPPAPGKDRKSLGGRMAMWRNKKNKT 689
Query: 530 CPRQGARSTGPYP--VHVPAL-NPV--EKPVPFVSQFEKPSWPYPV 652
G P V V A+ PV ++P P VS+ KP+ P PV
Sbjct: 690 ASMVGPPEPKELPAVVEVEAIVEPVVEDQPEPVVSEELKPTEPEPV 735
>AF039052-4|AAF98630.1| 981|Caenorhabditis elegans Proteasome
regulatory particle,non-atpase-like protein 1 protein.
Length = 981
Score = 27.5 bits (58), Expect = 8.9
Identities = 24/76 (31%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Frame = +2
Query: 365 PRQGARAPALPSREARPLPRQGSSAPTLPRGETRAIPRRS-*GARTAALPRCEARRCPRQ 541
P A PA P+ + + G+ APT A PRR GA +AA P P
Sbjct: 636 PAPAAATPARPAAQPGNVNVAGTPAPTGTPAVAPAAPRRDLPGAASAATP-----GAPET 690
Query: 542 GARSTGPYPVHVPALN 589
A P P P L+
Sbjct: 691 AAADATPAPPAKPDLS 706
>AB039949-1|BAC06512.1| 747|Caenorhabditis elegans kinesin protein.
Length = 747
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +2
Query: 113 PTSPRPSPSSKASLYLTPSTDPFHTQLRSTCLIPSR*PCPNP 238
P S R + + K L T T P HT R+ + P+ P P P
Sbjct: 212 PKSTRTTAAFKPDLDSTAITVPKHTARRTVVVAPAPAPVPAP 253
>AB017164-1|BAA32661.1| 689|Caenorhabditis elegans Kinesin like
protein (klp-7) protein.
Length = 689
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +2
Query: 113 PTSPRPSPSSKASLYLTPSTDPFHTQLRSTCLIPSR*PCPNP 238
P S R + + K L T T P HT R+ + P+ P P P
Sbjct: 154 PKSTRTTAAFKPDLDSTAITVPKHTARRTVVVAPAPAPVPAP 195
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,665,003
Number of Sequences: 27780
Number of extensions: 288480
Number of successful extensions: 1670
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 1104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1548
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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