Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0607
         (672 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    23   2.0  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    23   2.0  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    23   2.0  
AB264333-1|BAF44088.1|   36|Apis mellifera ecdysone-induced prot...    23   3.5  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   6.1  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   8.1  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 361 RFVRXVHTGVSKVIRNRLGEPG 426
           +F++ +H G + +IRN    PG
Sbjct: 564 QFIQNLHAGENTIIRNSQQAPG 585


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 74  LRTGCRHPSRGGGLPSAKQ 130
           L + C  PSRG  +PS+++
Sbjct: 12  LLSSCTRPSRGNAVPSSQR 30


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 74  LRTGCRHPSRGGGLPSAKQ 130
           L + C  PSRG  +PS+++
Sbjct: 12  LLSSCTRPSRGNAVPSSQR 30


>AB264333-1|BAF44088.1|   36|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 36

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 500 MCFPYNLCRIPRDLSPTQITL 438
           M  PY++ ++P  LSP   T+
Sbjct: 1   MSSPYHVAQLPHHLSPNMPTM 21


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +3

Query: 567 LPFSPQDYEFXSREKSFYNKFQGLWSF 647
           +P + Q Y    R+ +FY  +Q + S+
Sbjct: 404 IPSALQSYSTSMRDPAFYMLYQNILSY 430


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 11/40 (27%), Positives = 21/40 (52%)
 Frame = +3

Query: 204 MKMVSAAKYTRAERDLKLLVPMVKVQYSSMKGLRLHLLKM 323
           M   SA  ++ +   L LL+P + + +   +  R HLL++
Sbjct: 1   MAAASATGFSASSVFLSLLIPALILYFIYFRISRRHLLEL 40


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,423
Number of Sequences: 438
Number of extensions: 4735
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20343105
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)