Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0605
(837 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 219 3e-58
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 208 6e-55
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 191 1e-49
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 177 2e-45
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 145 6e-36
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 73 5e-14
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 39 8e-04
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 29 0.82
SPAC25B8.04c |||mitochondrial splicing suppressor |Schizosacchar... 29 1.1
SPAC1F7.01c |spt6|SPAC694.07c|transcription elongation factor Sp... 28 1.4
SPAC823.11 |||sphingosine-1-phosphate phosphatase |Schizosacchar... 26 7.6
SPAC3G9.11c |||pyruvate decarboxylase |Schizosaccharomyces pombe... 26 7.6
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 219 bits (536), Expect = 3e-58
Identities = 111/170 (65%), Positives = 126/170 (74%)
Frame = +1
Query: 256 AMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEV 435
AMNP+NTIFDAKRLIGRKF+D VQ+DMKHWPF+V+S GKP ++V YKGE KTF PEE+
Sbjct: 58 AMNPHNTIFDAKRLIGRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYKGETKTFTPEEI 117
Query: 436 SSMVLTKMKETAEAYLGKTVQNAVTRFPRTSMTLKDKPQKMQVPSLGLNVLRIINEPTAA 615
SSMVL KM+ETAEAYLG V +AV P + + K GLNVLRIINEPTAA
Sbjct: 118 SSMVLMKMRETAEAYLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAA 177
Query: 616 AIAYGLDKKGTGERNVLIFXLGGGTFDVSILPSRMVSFXVKSTAGDNPLG 765
AIAYGLD+ GE NVLIF LGGGTFDVS+L F VK+TAGD LG
Sbjct: 178 AIAYGLDRSNQGESNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLG 227
Score = 101 bits (243), Expect = 1e-22
Identities = 46/53 (86%), Positives = 50/53 (94%)
Frame = +2
Query: 95 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 253
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 56
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 208 bits (509), Expect = 6e-55
Identities = 106/170 (62%), Positives = 123/170 (72%)
Frame = +1
Query: 256 AMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEV 435
AMNP+NTIFDAKRLIGR+F D VQ+DMKHWPF+V+ GKP I+V +KGE KTF PEE+
Sbjct: 58 AMNPHNTIFDAKRLIGRRFNDPEVQSDMKHWPFKVIEKDGKPLIQVEFKGETKTFTPEEI 117
Query: 436 SSMVLTKMKETAEAYLGKTVQNAVTRFPRTSMTLKDKPQKMQVPSLGLNVLRIINEPTAA 615
SSMVL KM+E+AEA+LG V +AV P + + K GLNVLRIINEPTAA
Sbjct: 118 SSMVLLKMRESAEAFLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAA 177
Query: 616 AIAYGLDKKGTGERNVLIFXLGGGTFDVSILPSRMVSFXVKSTAGDNPLG 765
AIAYGLD+ E NVLIF LGGGTFDVS+L F VK+TAGD LG
Sbjct: 178 AIAYGLDRSNQHETNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLG 227
Score = 101 bits (243), Expect = 1e-22
Identities = 46/53 (86%), Positives = 50/53 (94%)
Frame = +2
Query: 95 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 253
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 56
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 191 bits (465), Expect = 1e-49
Identities = 98/170 (57%), Positives = 116/170 (68%)
Frame = +1
Query: 256 AMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEV 435
AMNP NT+FDAKRLIGR++ED Q D+KHWPF+V+ + G P I+V Y GE K F +E+
Sbjct: 62 AMNPRNTVFDAKRLIGRRYEDPETQKDIKHWPFKVIDNNGIPTIEVNYLGEKKQFTAQEI 121
Query: 436 SSMVLTKMKETAEAYLGKTVQNAVTRFPRTSMTLKDKPQKMQVPSLGLNVLRIINEPTAA 615
S+MVLTKMKE +EA L K V+ AV P + K GLNVLRIINEPTAA
Sbjct: 122 SAMVLTKMKEISEAKLNKRVEKAVITVPAYFSDSQRAATKDAGAIAGLNVLRIINEPTAA 181
Query: 616 AIAYGLDKKGTGERNVLIFXLGGGTFDVSILPSRMVSFXVKSTAGDNPLG 765
AIAYGLD K +NVLIF LGGGTFDVS+L + F V +TAGD LG
Sbjct: 182 AIAYGLDAKSDKPKNVLIFDLGGGTFDVSLLKIQGGVFEVLATAGDTHLG 231
Score = 92.3 bits (219), Expect = 8e-20
Identities = 42/58 (72%), Positives = 48/58 (82%)
Frame = +2
Query: 95 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQGR*TP 268
A+GIDLGTTYSCV V++ VEII NDQG RTTPS+VAFT+TERL+GDAAKNQ P
Sbjct: 8 AIGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTETERLVGDAAKNQAAMNP 65
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 177 bits (430), Expect = 2e-45
Identities = 88/168 (52%), Positives = 118/168 (70%)
Frame = +1
Query: 262 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSS 441
NP NTIFD KRLIGRKF++ T+ D+K +PF +V+D +P ++V G+ K F PEE+S+
Sbjct: 93 NPENTIFDIKRLIGRKFDEKTMAKDIKSFPFHIVNDKNRPLVEVNVGGKKKKFTPEEISA 152
Query: 442 MVLTKMKETAEAYLGKTVQNAVTRFPRTSMTLKDKPQKMQVPSLGLNVLRIINEPTAAAI 621
M+L+KMK+TAEAYLGK V +AV P + + K GLNV+RI+NEPTAAAI
Sbjct: 153 MILSKMKQTAEAYLGKPVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVIRIVNEPTAAAI 212
Query: 622 AYGLDKKGTGERNVLIFXLGGGTFDVSILPSRMVSFXVKSTAGDNPLG 765
AYGLDK T E++++++ LGGGTFDVS+L F V +T+GD LG
Sbjct: 213 AYGLDKTDT-EKHIVVYDLGGGTFDVSLLSIDNGVFEVLATSGDTHLG 259
Score = 94.3 bits (224), Expect = 2e-20
Identities = 42/57 (73%), Positives = 49/57 (85%)
Frame = +2
Query: 98 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQGR*TP 268
+GIDLGTTYSCV V ++G+VEIIANDQGNR TPSYVAFT+ ERL+G+AAKNQ P
Sbjct: 38 IGIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFTEDERLVGEAAKNQAPSNP 94
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 145 bits (352), Expect = 6e-36
Identities = 77/169 (45%), Positives = 102/169 (60%)
Frame = +1
Query: 259 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVS 438
+NP NT F KRLIGR+F++ VQ D+K P+++V + KT+ P ++
Sbjct: 108 INPENTFFATKRLIGRRFKEPEVQRDIKEVPYKIVEHSNGD---AWLEARGKTYSPSQIG 164
Query: 439 SMVLTKMKETAEAYLGKTVQNAVTRFPRTSMTLKDKPQKMQVPSLGLNVLRIINEPTAAA 618
+L+KM+ETA YLGK V+NAV P + + K GLNVLR++NEPTAAA
Sbjct: 165 GFILSKMRETASTYLGKDVKNAVVTVPAYFNDSQRQATKAAGAIAGLNVLRVVNEPTAAA 224
Query: 619 IAYGLDKKGTGERNVLIFXLGGGTFDVSILPSRMVSFXVKSTAGDNPLG 765
+AYGLDKK + V +F LGGGTFD+SIL F V+ST GD LG
Sbjct: 225 LAYGLDKK--NDAIVAVFDLGGGTFDISILELNNGVFEVRSTNGDTHLG 271
Score = 67.7 bits (158), Expect = 2e-12
Identities = 33/66 (50%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Frame = +2
Query: 86 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQGR* 262
K P +GIDLGTT SC+ + + ++IAN +G RTTPS VAFT D ERL+G +AK Q
Sbjct: 49 KGPVIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKRQAVI 108
Query: 263 TPTTQY 280
P +
Sbjct: 109 NPENTF 114
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 72.9 bits (171), Expect = 5e-14
Identities = 53/175 (30%), Positives = 79/175 (45%), Gaps = 5/175 (2%)
Frame = +1
Query: 256 AMNPNNTIFDAKRLIGRKFEDATVQ-ADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEE 432
A N NT+ KRL GR ++D ++ + ++ G KV Y E+ F +
Sbjct: 61 ASNFRNTVGSLKRLAGRTYDDPEIKDIESNFISAKLTEVDGFVGAKVQYLNEETAFSNIQ 120
Query: 433 VSSMVLTKMKETAEAYLGKTVQNAVTRFPRTSMTLKDKPQKMQVPSLGLNVLRIINEPTA 612
+ + TK+K AEA L +V + V P ++ + GLN LR++N+ A
Sbjct: 121 LIAAYFTKIKAIAEAELIGSVSDVVISIPAWFTDIQRRALLEAANIAGLNPLRLMNDNAA 180
Query: 613 AAIAYGLDKKGTGE----RNVLIFXLGGGTFDVSILPSRMVSFXVKSTAGDNPLG 765
AA+ YG+ K E R V I G + VSI+ F +KST D LG
Sbjct: 181 AALTYGITKTDLPEPESPRRVAIVDFGHSNYSVSIVEFSRGQFHIKSTVCDRNLG 235
Score = 48.8 bits (111), Expect = 9e-07
Identities = 19/56 (33%), Positives = 37/56 (66%)
Frame = +2
Query: 83 AKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKN 250
++ VGID G + + + V ++ +++I N+ NR+TPS V++ + R +G+AAK+
Sbjct: 3 SRTNVVGIDFGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYGERSRFLGEAAKS 58
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 39.1 bits (87), Expect = 8e-04
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +2
Query: 98 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 253
+GI G S + + GK +++AN++GNR PS +++ + G A+ Q
Sbjct: 27 IGISFGNQNSSIAFNRDGKTDVLANEEGNRQIPSILSYHGDQEYHGVQARGQ 78
Score = 30.3 bits (65), Expect = 0.35
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 501 CSYTVPAYFNDSQRQATKDAGTISGL 578
C +VP YF D+QR+A + A +GL
Sbjct: 166 CVMSVPVYFTDAQRKALESAANEAGL 191
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 29.1 bits (62), Expect = 0.82
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +2
Query: 98 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKN 250
+ ID GT ++ + + G +EI+ R S VAF ER+ G A N
Sbjct: 25 LAIDYGTEWTKAALIKPGIPLEIVLTKDTRRKEQSAVAFKGNERIFGVDASN 76
>SPAC25B8.04c |||mitochondrial splicing suppressor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 378
Score = 28.7 bits (61), Expect = 1.1
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 90 HPQ*ESIWVPRTLALVSSSTGRWRSSPTTRAT 185
HP S W+P LVS+ W +SP+++ T
Sbjct: 283 HPLYSSSWIPTLHDLVSTRCSVWLTSPSSQRT 314
>SPAC1F7.01c |spt6|SPAC694.07c|transcription elongation factor
Spt6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1365
Score = 28.3 bits (60), Expect = 1.4
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = -2
Query: 365 LTTSKGQCFMSACTVASSNLRPMRRLASNIVLLGFIAPGSWRHL 234
L S+ + ++S V +RP + + +IV+ +A GS++H+
Sbjct: 1173 LNASQAEAYLSKMQVGDLVIRPSSKGSDHIVVTWKVAEGSYQHI 1216
>SPAC823.11 |||sphingosine-1-phosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 411
Score = 25.8 bits (54), Expect = 7.6
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = -2
Query: 176 GRWR*SPPSRAGRHQRKSTWYPDRFLLRVLLPFCIFNQSCYLFLKQLSKRARL 18
G W SP S + H ++++ +F +RVL C+ L K +K+A L
Sbjct: 276 GTWFASPESLSHLHDNLNSYFLLKFFVRVLFGVCMI-----LIWKSFAKQALL 323
>SPAC3G9.11c |||pyruvate decarboxylase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 570
Score = 25.8 bits (54), Expect = 7.6
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = -3
Query: 268 WGSSPLVLGGISDETLGVCERNIRRSGPVALVVGD-DLHLPVLEDTNARVR 119
WGS +G + TLG+ + + + L+VGD LHL V ++ +A +R
Sbjct: 418 WGSIGWSVGAMFGATLGIKDSDAPHRRSI-LIVGDGSLHLTV-QEISATIR 466
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,653,171
Number of Sequences: 5004
Number of extensions: 79087
Number of successful extensions: 270
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 254
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 412451140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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