Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0602
         (807 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49911-9|CAA90133.1|  682|Caenorhabditis elegans Hypothetical pr...    28   6.8  
Z81527-16|CAB04280.1|  915|Caenorhabditis elegans Hypothetical p...    28   9.0  
Z81527-15|CAB04279.1|  927|Caenorhabditis elegans Hypothetical p...    28   9.0  
Z81110-8|CAB03263.1|  915|Caenorhabditis elegans Hypothetical pr...    28   9.0  
Z81110-7|CAB03262.1|  927|Caenorhabditis elegans Hypothetical pr...    28   9.0  
AL032637-21|CAA21618.2|  612|Caenorhabditis elegans Hypothetical...    28   9.0  

>Z49911-9|CAA90133.1|  682|Caenorhabditis elegans Hypothetical
           protein M28.7 protein.
          Length = 682

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +3

Query: 324 HVRRSPPNLPRKLSLRIGARXRR*XLHAANPTSKRK 431
           HV+  P N+P K+S R+G R     +      S+R+
Sbjct: 272 HVKEKPKNVPSKVSSRLGVRDSVIGISTTTDPSRRE 307


>Z81527-16|CAB04280.1|  915|Caenorhabditis elegans Hypothetical
           protein T01D3.6b protein.
          Length = 915

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = +1

Query: 277 CPSKLRAVVVNGQ-HIFTFDGRHLTFPGNCRYVLA 378
           C  K++   ++G  H  T+DG    + G C YV +
Sbjct: 181 CDMKVQQACMSGDPHYVTYDGLRFDYQGTCPYVFS 215


>Z81527-15|CAB04279.1|  927|Caenorhabditis elegans Hypothetical
           protein T01D3.6a protein.
          Length = 927

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = +1

Query: 277 CPSKLRAVVVNGQ-HIFTFDGRHLTFPGNCRYVLA 378
           C  K++   ++G  H  T+DG    + G C YV +
Sbjct: 181 CDMKVQQACMSGDPHYVTYDGLRFDYQGTCPYVFS 215


>Z81110-8|CAB03263.1|  915|Caenorhabditis elegans Hypothetical
           protein T01D3.6b protein.
          Length = 915

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = +1

Query: 277 CPSKLRAVVVNGQ-HIFTFDGRHLTFPGNCRYVLA 378
           C  K++   ++G  H  T+DG    + G C YV +
Sbjct: 181 CDMKVQQACMSGDPHYVTYDGLRFDYQGTCPYVFS 215


>Z81110-7|CAB03262.1|  927|Caenorhabditis elegans Hypothetical
           protein T01D3.6a protein.
          Length = 927

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = +1

Query: 277 CPSKLRAVVVNGQ-HIFTFDGRHLTFPGNCRYVLA 378
           C  K++   ++G  H  T+DG    + G C YV +
Sbjct: 181 CDMKVQQACMSGDPHYVTYDGLRFDYQGTCPYVFS 215


>AL032637-21|CAA21618.2|  612|Caenorhabditis elegans Hypothetical
           protein Y43F8C.3 protein.
          Length = 612

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 14/55 (25%), Positives = 23/55 (41%)
 Frame = +1

Query: 274 KCPSKLRAVVVNGQHIFTFDGRHLTFPGNCRYVLAHXHVDRXFTLLIQLQNGKPK 438
           KC  ++   VV+ +  +TF G H      C   +A       F + ++L N   K
Sbjct: 68  KCTHQVEPPVVDWEQEYTFGGAHTVLVNPCLLKIAEQKEKMTFVVELKLLNDSEK 122


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,225,777
Number of Sequences: 27780
Number of extensions: 313936
Number of successful extensions: 764
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 764
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1977346024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)