Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0601
         (811 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    27   0.23 
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    26   0.31 
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    26   0.31 
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     24   1.6  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    24   1.6  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           24   1.6  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    24   1.6  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           23   3.8  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    22   6.6  
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    21   8.8  

>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 26.6 bits (56), Expect = 0.23
 Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
 Frame = +3

Query: 135 VMCVSTLARALLVSGLVFMGG-LSPSNNSLRCMLTNSRLTLQAYEQVMGRKLFQPSNEEV 311
           +   S L   + + GLV     L P N  L  +L N RLT    + ++G+    P  EE+
Sbjct: 1   MFATSALFAFICIQGLVSAEEYLVPQNIDLDEILKNDRLTRNYIDCILGKGKCTPEGEEL 60


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 26.2 bits (55), Expect = 0.31
 Identities = 19/58 (32%), Positives = 27/58 (46%)
 Frame = +3

Query: 144 VSTLARALLVSGLVFMGGLSPSNNSLRCMLTNSRLTLQAYEQVMGRKLFQPSNEEVVK 317
           V  LA A L + +     L P N  +  +L N RLT    + V+G+    P  EE+ K
Sbjct: 5   VFLLALACLKTYVSSQEYLVPQNIDVDEILKNDRLTRNYLDCVLGKGKCTPEGEELKK 62


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 26.2 bits (55), Expect = 0.31
 Identities = 19/58 (32%), Positives = 27/58 (46%)
 Frame = +3

Query: 144 VSTLARALLVSGLVFMGGLSPSNNSLRCMLTNSRLTLQAYEQVMGRKLFQPSNEEVVK 317
           V  LA A L + +     L P N  +  +L N RLT    + V+G+    P  EE+ K
Sbjct: 5   VFLLALACLKTYVSSQEYLVPQNIDVDEILKNDRLTRNYLDCVLGKGKCTPEGEELKK 62


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -2

Query: 693 GRHHLAHVHHQWGFRNHSS 637
           G HH+     Q+G+ NH +
Sbjct: 51  GNHHIQQQQLQYGYHNHQN 69


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -2

Query: 693 GRHHLAHVHHQWGFRNHSS 637
           G HH+     Q+G+ NH +
Sbjct: 51  GNHHIQQQQLQYGYHNHQN 69


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -2

Query: 693 GRHHLAHVHHQWGFRNHSS 637
           G HH+     Q+G+ NH +
Sbjct: 51  GNHHIQQQQLQYGYHNHQN 69


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -2

Query: 693 GRHHLAHVHHQWGFRNHSS 637
           G HH+     Q+G+ NH +
Sbjct: 51  GNHHIQQQQLQYGYHNHQN 69


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 8/27 (29%), Positives = 11/27 (40%)
 Frame = +1

Query: 265 NRLWGENFFNPQTKKWSKQKDDDNKRS 345
           N  W  N  N     W K   +DN+ +
Sbjct: 373 NNRWHNNNGNNSNNHWRKNNPNDNRNN 399


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +1

Query: 706 RFLRLWTRFLWQGCYRTKKSHHGTKLYTWK 795
           RF++LWT F   G    K+      + TWK
Sbjct: 462 RFVKLWTNFAKNGDPNPKEKTPFINV-TWK 490


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = +3

Query: 204 PSNNSLRCMLTNSRLTLQAYEQVMGRKLFQPSNEEVVK 317
           P N  +  +L N RLT    + ++ +    P  EE+ K
Sbjct: 24  PQNIDIDEILKNDRLTKNYLDCILEKGKCTPEGEELKK 61


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,630
Number of Sequences: 336
Number of extensions: 4663
Number of successful extensions: 20
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22102797
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)