Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0601
(811 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 134 1e-32
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 134 1e-32
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 57 3e-09
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 42 1e-04
SPBC106.09 |cut4|apc1|anaphase-promoting complex subunit Apc1|Sc... 28 1.8
SPAC607.05 |rpn9||19S proteasome regulatory subunit Rpn9|Schizos... 28 1.8
SPBC106.10 |pka1|tpk, git6|cAMP-dependent protein kinase catalyt... 27 2.4
SPBC3B9.21 |dcp1||mRNA decapping complex subunit Dcp1|Schizosacc... 27 2.4
SPAC17A2.06c |vps8||WD repeat protein Vps8|Schizosaccharomyces p... 27 3.2
SPCC285.14 |||TRAPP complex subunit Trs130 |Schizosaccharomyces ... 27 3.2
SPAC24C9.11 |||MIF4G/MA4 domain protein|Schizosaccharomyces pomb... 27 3.2
SPAC1805.01c |ppk6|SPAPJ736.02c|serine/threonine protein kinase ... 27 4.2
SPBC13E7.02 |cwf24||GCN5-related N acetyltransferase|Schizosacch... 26 5.5
SPBPB8B6.03 ||SPAPB8B6.03, SPAPB8B6.03|acetamidase |Schizosaccha... 26 7.3
SPCC1393.06c |||rRNA processing protein Ipi1|Schizosaccharomyces... 25 9.6
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 134 bits (324), Expect = 1e-32
Identities = 75/159 (47%), Positives = 100/159 (62%), Gaps = 7/159 (4%)
Frame = +1
Query: 256 KLMNRLWGENFFNPQTKKWSKQKDD----DNKRSFCMYVLDPIYKVFDAIMKFKKEEIDD 423
K+M RLWGEN+FNP+TKKWSK D N+R+F M++LDPIY++FDA+M +K+E+
Sbjct: 239 KMMQRLWGENYFNPKTKKWSKSATDANGNSNQRAFNMFILDPIYRIFDAVMNSRKDEVFT 298
Query: 424 LLKKIGVTIKHEDSDKDGKALLKVVMRSCCLLVKLCFR*LPFIYHHL*WPRNI-VWRCYT 600
LL K+ VTIK ++ + +GKALLKVVMR + + I HL P+ +R T
Sbjct: 299 LLSKLEVTIKPDEKELEGKALLKVVMRK---FLPAADALMEMIVLHLPSPKTAQQYRAET 355
Query: 601 --XDPTMMXLPLVSRAVIPEAPLMMYVSKMVPTSDKGRF 711
P + R APLM+YVSKMVPTSD+GRF
Sbjct: 356 LYEGPMDDECAVGIRNCDANAPLMIYVSKMVPTSDRGRF 394
Score = 83.8 bits (198), Expect = 3e-17
Identities = 38/64 (59%), Positives = 48/64 (75%)
Frame = +2
Query: 59 YQTFQRIVENVNVIIATYNDDGGPMGDVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYADK 238
YQ F R+VE+VNV+I+TY D +GD +V P KG+V F SGLHGWAFT++QF+ YA K
Sbjct: 175 YQNFARVVESVNVVISTYYDK--VLGDCQVFPDKGTVAFASGLHGWAFTVRQFANRYAKK 232
Query: 239 FKID 250
F ID
Sbjct: 233 FGID 236
Score = 49.2 bits (112), Expect = 7e-07
Identities = 22/33 (66%), Positives = 25/33 (75%)
Frame = +2
Query: 710 FYAFGRVFSGKVVTGPKSRIMGPNFTPGKERGL 808
FYAFGRVFSG V +G K RI GPN+ PGK+ L
Sbjct: 394 FYAFGRVFSGTVRSGLKVRIQGPNYVPGKKDDL 426
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 134 bits (324), Expect = 1e-32
Identities = 75/159 (47%), Positives = 100/159 (62%), Gaps = 7/159 (4%)
Frame = +1
Query: 256 KLMNRLWGENFFNPQTKKWSKQKDD----DNKRSFCMYVLDPIYKVFDAIMKFKKEEIDD 423
K+M RLWGEN+FNP+TKKWSK D N+R+F M++LDPIY++FDA+M +K+E+
Sbjct: 239 KMMQRLWGENYFNPKTKKWSKSATDANGNSNQRAFNMFILDPIYRIFDAVMNSRKDEVFT 298
Query: 424 LLKKIGVTIKHEDSDKDGKALLKVVMRSCCLLVKLCFR*LPFIYHHL*WPRNI-VWRCYT 600
LL K+ VTIK ++ + +GKALLKVVMR + + I HL P+ +R T
Sbjct: 299 LLSKLEVTIKPDEKELEGKALLKVVMRK---FLPAADALMEMIVLHLPSPKTAQQYRAET 355
Query: 601 --XDPTMMXLPLVSRAVIPEAPLMMYVSKMVPTSDKGRF 711
P + R APLM+YVSKMVPTSD+GRF
Sbjct: 356 LYEGPMDDECAVGIRNCDANAPLMIYVSKMVPTSDRGRF 394
Score = 83.8 bits (198), Expect = 3e-17
Identities = 38/64 (59%), Positives = 48/64 (75%)
Frame = +2
Query: 59 YQTFQRIVENVNVIIATYNDDGGPMGDVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYADK 238
YQ F R+VE+VNV+I+TY D +GD +V P KG+V F SGLHGWAFT++QF+ YA K
Sbjct: 175 YQNFARVVESVNVVISTYYDK--VLGDCQVFPDKGTVAFASGLHGWAFTVRQFANRYAKK 232
Query: 239 FKID 250
F ID
Sbjct: 233 FGID 236
Score = 49.2 bits (112), Expect = 7e-07
Identities = 22/33 (66%), Positives = 25/33 (75%)
Frame = +2
Query: 710 FYAFGRVFSGKVVTGPKSRIMGPNFTPGKERGL 808
FYAFGRVFSG V +G K RI GPN+ PGK+ L
Sbjct: 394 FYAFGRVFSGTVRSGLKVRIQGPNYVPGKKDDL 426
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 57.2 bits (132), Expect = 3e-09
Identities = 40/154 (25%), Positives = 74/154 (48%), Gaps = 6/154 (3%)
Frame = +1
Query: 268 RLWGENFFNPQTKKWSKQK-DDDNKRSFCMYVLDPIYKVFDAIMKFKKEEIDDLLKKIGV 444
RLWG+ +F+ +T+K++KQ D RSF ++L+P+YK+ + + E++ L +
Sbjct: 353 RLWGDIYFDSKTRKFAKQSLDGSGVRSFVHFILEPLYKLHTLTISDEAEKLKKHLSSFQI 412
Query: 445 TIKHEDSDKDGKALLKVVMRSCCLLVKLCFR*LPFIYHHL*WPRNIVWRCYTXDPTMMXL 624
+K +D D K LL+++ C + + H+ PR R +
Sbjct: 413 YLKPKDYLLDPKPLLQLI---CASFFGFPVGFVNAVTRHIPSPRENAARKASQSYIGPIN 469
Query: 625 PLVSRAVI-----PEAPLMMYVSKMVPTSDKGRF 711
+ +A++ APL+M+V+K+ T D F
Sbjct: 470 SSIGKAILEMSREESAPLVMHVTKLYNTVDANNF 503
Score = 36.7 bits (81), Expect = 0.004
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +2
Query: 710 FYAFGRVFSGKVVTGPKSRIMGPNFTPGKERGLV 811
FYAF RV+SG+V G K +++G N++ E +V
Sbjct: 503 FYAFARVYSGQVKKGQKVKVLGENYSLEDEEDMV 536
Score = 33.5 bits (73), Expect = 0.036
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = +2
Query: 59 YQTFQRIVENVNVIIATYNDDGGPMGDVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYADK 238
Y + +++ VN I + D RV P G+V F S G+ FTL F+++Y D+
Sbjct: 286 YHKLRHVIDEVNDNICQISKDL----KYRVSPELGNVCFASCDLGYCFTLSSFAKLYIDR 341
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 41.9 bits (94), Expect = 1e-04
Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 10/73 (13%)
Frame = +2
Query: 74 RIVENVNVIIATY----------NDDGGPMGDVRVDPSKGSVGFGSGLHGWAFTLKQFSE 223
R+VE VN +I T+ ND+ + P +G+V F S GWAF L QFSE
Sbjct: 176 RLVEQVNAVIGTFYTGELMQLADNDEVISDEGIYFAPEQGNVVFASAYDGWAFCLDQFSE 235
Query: 224 MYADKFKIDLASL 262
Y K + +L
Sbjct: 236 FYEKKLGLKQKAL 248
Score = 39.1 bits (87), Expect = 7e-04
Identities = 36/156 (23%), Positives = 72/156 (46%), Gaps = 12/156 (7%)
Frame = +1
Query: 271 LWGENFFNPQTKKWSKQKDDDNKR---SFCMYVLDPIYKVFD-AIMKFKKEEIDDLLKKI 438
LWG+ + +P+TK+ + K +R F +VL+ ++ V++ A+ E I+ ++K +
Sbjct: 252 LWGDYYLDPKTKRVLQPKHLQGRRLKPMFVQFVLENLWAVYESAVSNRNLENIEKIIKAL 311
Query: 439 GVTIKHED-SDKDGKALLKVVMRS----CCLLVKLCFR*LPF-IYHHL*WPRNIVWRC-- 594
+ + D KD + LL + + ++ R +P I R ++
Sbjct: 312 NIKVLPRDIKSKDPRNLLLAIFQQWLPLSTAILLTAIREIPSPINAQANRARKVLSSTPH 371
Query: 595 YTXDPTMMXLPLVSRAVIPEAPLMMYVSKMVPTSDK 702
Y + L + S E P+++Y+SKMV S++
Sbjct: 372 YEMIDPDITLAMESCDASKEQPVLVYISKMVAFSER 407
Score = 27.1 bits (57), Expect = 3.2
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = +2
Query: 701 KVVFYAFGRVFSGKVVTGPKSRIMGPNFTP 790
K + F R++SG + G + + GP + P
Sbjct: 465 KDILIGFARIYSGTISVGQEVYVYGPKYDP 494
>SPBC106.09 |cut4|apc1|anaphase-promoting complex subunit
Apc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1458
Score = 27.9 bits (59), Expect = 1.8
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +1
Query: 256 KLMNRLWGENFFNPQTKKWSKQKDD 330
+L+NRL ++F +P+T KW K D
Sbjct: 640 RLVNRLDVDSFLHPKTPKWVFNKQD 664
>SPAC607.05 |rpn9||19S proteasome regulatory subunit
Rpn9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 381
Score = 27.9 bits (59), Expect = 1.8
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = -2
Query: 525 LHQQATRAHHNLQQSFAIFVRILMLDC-DSNLLKEIINLLFLKF 397
LH QATRA +LQQS+ ILM D + L K++ + L + F
Sbjct: 13 LHDQATRAPESLQQSY-----ILMEDLYERKLWKQLTDALIVFF 51
>SPBC106.10 |pka1|tpk, git6|cAMP-dependent protein kinase catalytic
subunit Pka1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 512
Score = 27.5 bits (58), Expect = 2.4
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Frame = -1
Query: 772 HDATFW-SGNNLARENASKGVEND-LCRRSAPSCSRTSSVGLQESQLLIPMAAXSSWGPS 599
++++ W SG A E A+K + D L S C+ SVG Q LIP S S
Sbjct: 74 NESSLWTSGIPKALEEATKSKKPDSLVSTSTSGCASAHSVGYQNIDNLIPSPLPESASRS 133
Query: 598 YNISIRYFWATTGDGK 551
+ S + G G+
Sbjct: 134 SSQSSHQRHSRDGRGE 149
>SPBC3B9.21 |dcp1||mRNA decapping complex subunit
Dcp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 127
Score = 27.5 bits (58), Expect = 2.4
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -2
Query: 444 DSNLLKEIINLLFLKFH-DGIEHLVDRIQNV 355
D N+L+ +NL LKFH IE ++D +V
Sbjct: 3 DENILRNAVNLQVLKFHYPEIESIIDIASHV 33
>SPAC17A2.06c |vps8||WD repeat protein Vps8|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1272
Score = 27.1 bits (57), Expect = 3.2
Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 3/97 (3%)
Frame = -3
Query: 536 LKQSFTSRQQERITTFSKALPSLSESSCLIVTPIFLRRSSISSFLNFMMASNTL*IGSKT 357
L+ + S I P +S S C+ +F+ S S +F+M S L + S+
Sbjct: 397 LRWDWYSNSLAAIGVSQTVFPFISSSLCISPRYMFVVNSETVSVGSFLMVSEQLQMLSER 456
Query: 356 YMQNERLLSSSFCFDHFFV*G---LKKFSPHNLFISL 255
Y + + S+C + + L+K S NL ++L
Sbjct: 457 YGFFDSIKFGSYCVSNLSIFPKLLLEKTSVINLIMAL 493
>SPCC285.14 |||TRAPP complex subunit Trs130 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1150
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 604 DPTMMXLPLVSRAVIPEAPLMMYVSKMVPTSDK 702
DPT++ +PLV+ +PE +Y ++ P + K
Sbjct: 68 DPTLLNIPLVNMLFLPEQDGEIYKTQHKPLATK 100
>SPAC24C9.11 |||MIF4G/MA4 domain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 775
Score = 27.1 bits (57), Expect = 3.2
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Frame = +1
Query: 280 ENFFNPQTKKWSKQKDDDNKRSFCMYVLDPIYKVFDAIMKFKKEEIDDLLKKIGVTIK-- 453
+++ + K +K+K NK++ +LDPI ++ EI L K +G+ K
Sbjct: 72 DDYLDAHRKSSTKKKSSQNKQAKESKLLDPIAFQHKIALEEDDREIAHLEKMLGIKSKDK 131
Query: 454 --HEDSDKDGKALLK 492
H DK+ LL+
Sbjct: 132 SAHSKIDKEFGWLLE 146
>SPAC1805.01c |ppk6|SPAPJ736.02c|serine/threonine protein kinase
Ppk6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 775
Score = 26.6 bits (56), Expect = 4.2
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +3
Query: 666 DVREQDGADLRQRSFSTPLDAFSLARLLPDQKVASWDQTLHLEKK 800
D++ QDG + +R+ PL + LLP + +WDQ L+L K
Sbjct: 261 DIKLQDGVAVDERT-EQPLTS----DLLPSRLPKTWDQRLYLTTK 300
>SPBC13E7.02 |cwf24||GCN5-related N
acetyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 533
Score = 26.2 bits (55), Expect = 5.5
Identities = 12/45 (26%), Positives = 25/45 (55%)
Frame = -3
Query: 530 QSFTSRQQERITTFSKALPSLSESSCLIVTPIFLRRSSISSFLNF 396
Q F + T+ + +PSL ++S I++ F+R + S+ ++F
Sbjct: 348 QGFADTLAKPNTSAQQKMPSLGDNSNTIISKYFIREITESNIVHF 392
>SPBPB8B6.03 ||SPAPB8B6.03, SPAPB8B6.03|acetamidase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 547
Score = 25.8 bits (54), Expect = 7.3
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = +1
Query: 373 YKVFDAIMKFKKEEIDDLLKKIGVTIKHE---DSDKDGKALLKVVMR 504
Y+V + + F+K+ +D ++K + E +S K G+ ++ VV R
Sbjct: 350 YEVIEISIPFQKDMLDTVVKVFSADARFEINNESQKTGEPVVSVVKR 396
>SPCC1393.06c |||rRNA processing protein Ipi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 408
Score = 25.4 bits (53), Expect = 9.6
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -2
Query: 435 LLKEIINLLFLKFHDGIEHLVDRIQNVHAK 346
LL+ I ++FL H G+ H+ I+N K
Sbjct: 133 LLEPNIGMIFLYTHSGMTHITPSIRNDSTK 162
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,443,982
Number of Sequences: 5004
Number of extensions: 74397
Number of successful extensions: 233
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 223
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 394431430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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