Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0601
(811 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0103 + 1082077-1082167,1083037-1085477 101 9e-22
02_04_0017 + 18937774-18937864,18938505-18940945 100 2e-21
01_06_0662 + 30987187-30987277,30987825-30990214 97 2e-20
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 93 2e-19
05_05_0156 + 22792783-22793410,22797153-22797227,22797644-227988... 71 1e-12
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 64 1e-10
03_05_0511 + 25056018-25059107 38 0.009
04_04_1268 - 32262994-32263017,32263411-32263488,32263653-322638... 32 0.62
02_01_0580 + 4303020-4303211,4303838-4303879,4304538-4304646,430... 30 2.5
01_01_0857 - 6693460-6693991,6695086-6695165,6695508-6697448 30 2.5
07_03_1495 + 26983415-26984797 29 3.3
05_05_0098 + 22373384-22373522,22373566-22373772,22373879-223739... 29 3.3
04_04_0378 - 24822436-24822521,24822623-24822738,24823010-248230... 29 3.3
01_01_1159 + 9224331-9224473,9224586-9224727,9225412-9225483,922... 29 3.3
07_01_0951 - 8001093-8001344,8001475-8001990,8002057-8002209,800... 29 4.4
12_01_0231 + 1744323-1745276,1745516-1746193 28 7.6
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 101 bits (241), Expect = 9e-22
Identities = 60/158 (37%), Positives = 86/158 (54%), Gaps = 6/158 (3%)
Frame = +1
Query: 256 KLMNRLWGENFFNPQTKKWSKQKDDDN--KRSFCMYVLDPIYKVFDAIMKFKKEEIDDLL 429
K+M RLWGENFF+P TKKW+ + KR F + +PI ++ + M +K+++ +L
Sbjct: 239 KMMERLWGENFFDPATKKWTNKSTGSATCKRGFVQFCYEPIKQIINTCMNDQKDKLWPML 298
Query: 430 KKIGVTIKHEDSDKDGKALLKVVMRSCCLLVKLCFR*LPFIYHHL*WPRNI----VWRCY 597
+K+GV +K ++ D GKAL+K VM++ L + +HL P V Y
Sbjct: 299 QKLGVVMKADEKDLMGKALMKRVMQTWLPASNAL---LEMMIYHLPSPSKAQKYRVENLY 355
Query: 598 TXDPTMMXLPLVSRAVIPEAPLMMYVSKMVPTSDKGRF 711
P R PE PLM+YVSKM+P SDKGRF
Sbjct: 356 -EGPLDDVYATAIRNCDPEGPLMLYVSKMIPASDKGRF 392
Score = 89.0 bits (211), Expect = 4e-18
Identities = 39/64 (60%), Positives = 49/64 (76%)
Frame = +2
Query: 59 YQTFQRIVENVNVIIATYNDDGGPMGDVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYADK 238
YQTF R++EN NVI+ATY D +GDV+V P KG+V F +GLHGWAFTL F++MYA K
Sbjct: 175 YQTFSRVIENANVIMATYEDT--LLGDVQVYPEKGTVAFSAGLHGWAFTLSSFAKMYASK 232
Query: 239 FKID 250
F +D
Sbjct: 233 FGVD 236
Score = 62.5 bits (145), Expect = 4e-10
Identities = 29/50 (58%), Positives = 34/50 (68%)
Frame = +3
Query: 510 LPAGEALLQMIAIHLPSPVVAQKYRMEMLYXGPHDDXAAIGIKSCDS*SP 659
LPA ALL+M+ HLPSP AQKYR+E LY GP DD A I++CD P
Sbjct: 326 LPASNALLEMMIYHLPSPSKAQKYRVENLYEGPLDDVYATAIRNCDPEGP 375
Score = 54.0 bits (124), Expect = 1e-07
Identities = 22/33 (66%), Positives = 28/33 (84%)
Frame = +2
Query: 710 FYAFGRVFSGKVVTGPKSRIMGPNFTPGKERGL 808
F+AFGRVFSG+V TG K RIMGPN+ PG+++ L
Sbjct: 392 FFAFGRVFSGRVATGMKVRIMGPNYVPGQKKDL 424
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 100 bits (239), Expect = 2e-21
Identities = 60/158 (37%), Positives = 87/158 (55%), Gaps = 6/158 (3%)
Frame = +1
Query: 256 KLMNRLWGENFFNPQTKKWSKQKDDDN--KRSFCMYVLDPIYKVFDAIMKFKKEEIDDLL 429
K+M RLWGENFF+P TKKW+ + KR F + +PI ++ + M +K+++ +L
Sbjct: 239 KMMERLWGENFFDPATKKWTNKNTGSATCKRGFVQFCYEPIKQIINTCMNDQKDKLWPML 298
Query: 430 KKIGVTIKHEDSDKDGKALLKVVMRSCCLLVKLCFR*LPFIYHHL*WP----RNIVWRCY 597
+K+GV +K ++ + GKAL+K VM++ L + +HL P R V Y
Sbjct: 299 QKLGVVMKADEKELMGKALMKRVMQTWLPASNAL---LEMMIYHLPSPSKAQRYRVENLY 355
Query: 598 TXDPTMMXLPLVSRAVIPEAPLMMYVSKMVPTSDKGRF 711
P R PE PLM+YVSKM+P SDKGRF
Sbjct: 356 -EGPLDDVYATAIRNCDPEGPLMLYVSKMIPASDKGRF 392
Score = 89.0 bits (211), Expect = 4e-18
Identities = 39/64 (60%), Positives = 49/64 (76%)
Frame = +2
Query: 59 YQTFQRIVENVNVIIATYNDDGGPMGDVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYADK 238
YQTF R++EN NVI+ATY D +GDV+V P KG+V F +GLHGWAFTL F++MYA K
Sbjct: 175 YQTFSRVIENANVIMATYEDT--LLGDVQVYPEKGTVAFSAGLHGWAFTLSSFAKMYASK 232
Query: 239 FKID 250
F +D
Sbjct: 233 FGVD 236
Score = 61.3 bits (142), Expect = 9e-10
Identities = 28/50 (56%), Positives = 34/50 (68%)
Frame = +3
Query: 510 LPAGEALLQMIAIHLPSPVVAQKYRMEMLYXGPHDDXAAIGIKSCDS*SP 659
LPA ALL+M+ HLPSP AQ+YR+E LY GP DD A I++CD P
Sbjct: 326 LPASNALLEMMIYHLPSPSKAQRYRVENLYEGPLDDVYATAIRNCDPEGP 375
Score = 54.0 bits (124), Expect = 1e-07
Identities = 22/33 (66%), Positives = 28/33 (84%)
Frame = +2
Query: 710 FYAFGRVFSGKVVTGPKSRIMGPNFTPGKERGL 808
F+AFGRVFSG+V TG K RIMGPN+ PG+++ L
Sbjct: 392 FFAFGRVFSGRVATGMKVRIMGPNYVPGQKKDL 424
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 96.7 bits (230), Expect = 2e-20
Identities = 63/158 (39%), Positives = 87/158 (55%), Gaps = 6/158 (3%)
Frame = +1
Query: 256 KLMNRLWGENFFNPQTKKWS-KQKDDDN-KRSFCMYVLDPIYKVFDAIMKFKKEEIDDLL 429
K+M RLWGEN+F+P TKKW+ K D KR F + +PI ++ + M +K+++ +L
Sbjct: 239 KMMERLWGENYFDPTTKKWTIKHTGSDTCKRGFIQFCYEPIRQIINTCMNDQKDKLLPML 298
Query: 430 KKIGVTIKHEDSDKDGKALLKVVMRSCCLLVKLCFR*LPFIYHHL*WP----RNIVWRCY 597
+K+GVT+K D GKAL+K VM++ L + +HL P R V Y
Sbjct: 299 QKLGVTMK----DLTGKALMKRVMQTWLPASNAL---LEMMIYHLPSPAKAQRYRVENLY 351
Query: 598 TXDPTMMXLPLVSRAVIPEAPLMMYVSKMVPTSDKGRF 711
P R PE PLM+YVSKM+P SDKGRF
Sbjct: 352 -EGPLDDIYASAIRNCDPEGPLMLYVSKMIPASDKGRF 388
Score = 89.4 bits (212), Expect = 3e-18
Identities = 39/64 (60%), Positives = 49/64 (76%)
Frame = +2
Query: 59 YQTFQRIVENVNVIIATYNDDGGPMGDVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYADK 238
YQTF R++EN NVI+ATY D +GDV+V P KG+V F +GLHGWAFTL F++MYA K
Sbjct: 175 YQTFSRVIENANVIMATYED--ALLGDVQVYPEKGTVAFSAGLHGWAFTLSNFAKMYASK 232
Query: 239 FKID 250
F +D
Sbjct: 233 FGVD 236
Score = 61.7 bits (143), Expect = 7e-10
Identities = 28/50 (56%), Positives = 34/50 (68%)
Frame = +3
Query: 510 LPAGEALLQMIAIHLPSPVVAQKYRMEMLYXGPHDDXAAIGIKSCDS*SP 659
LPA ALL+M+ HLPSP AQ+YR+E LY GP DD A I++CD P
Sbjct: 322 LPASNALLEMMIYHLPSPAKAQRYRVENLYEGPLDDIYASAIRNCDPEGP 371
Score = 55.6 bits (128), Expect = 4e-08
Identities = 23/33 (69%), Positives = 28/33 (84%)
Frame = +2
Query: 710 FYAFGRVFSGKVVTGPKSRIMGPNFTPGKERGL 808
FYAFGRVFSG+V TG K RIMGPN+ PG+++ L
Sbjct: 388 FYAFGRVFSGRVATGMKVRIMGPNYAPGQKKDL 420
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 93.5 bits (222), Expect = 2e-19
Identities = 58/159 (36%), Positives = 85/159 (53%), Gaps = 7/159 (4%)
Frame = +1
Query: 256 KLMNRLWGENFFNPQTKKWSKQKDDDN----KRSFCMYVLDPIYKVFDAIMKFKKEEIDD 423
K+M RLWGEN+F+ TKKW+ + +R F + +PI ++ A M KE + D
Sbjct: 239 KMMERLWGENYFDHTTKKWTTTAPSTSSKTCQRGFVQFCYEPIRRIISACMNDDKENLWD 298
Query: 424 LLKKIGVTIKHEDSDKDGKALLKVVMRSCCLLVKLCFR*LPFIYHHL*WPRNI-VWRCYT 600
+L K+ +T+K E+ + GK L+K VM++ + L I HL P +R T
Sbjct: 299 MLTKLKITLKAEEKELTGKKLMKRVMQA---WLPASDALLEMIVFHLPSPAKAQQYRVDT 355
Query: 601 XDPTMMXLPLVS--RAVIPEAPLMMYVSKMVPTSDKGRF 711
+ P + R P+ PLM+YVSKM+P SDKGRF
Sbjct: 356 LYDGPLDDPYATAIRNCDPKGPLMVYVSKMIPASDKGRF 394
Score = 82.2 bits (194), Expect = 4e-16
Identities = 36/68 (52%), Positives = 47/68 (69%)
Frame = +2
Query: 59 YQTFQRIVENVNVIIATYNDDGGPMGDVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYADK 238
YQ F R++E+VNV +A Y D +GD V P KG+V F +GLHGWAFTL F++MY K
Sbjct: 175 YQAFSRVIESVNVTMAPYEDKN--LGDCMVAPEKGTVAFSAGLHGWAFTLSNFAKMYKAK 232
Query: 239 FKIDLASL 262
FK+D A +
Sbjct: 233 FKVDEAKM 240
Score = 63.7 bits (148), Expect = 2e-10
Identities = 28/50 (56%), Positives = 35/50 (70%)
Frame = +3
Query: 510 LPAGEALLQMIAIHLPSPVVAQKYRMEMLYXGPHDDXAAIGIKSCDS*SP 659
LPA +ALL+MI HLPSP AQ+YR++ LY GP DD A I++CD P
Sbjct: 328 LPASDALLEMIVFHLPSPAKAQQYRVDTLYDGPLDDPYATAIRNCDPKGP 377
Score = 54.0 bits (124), Expect = 1e-07
Identities = 23/33 (69%), Positives = 27/33 (81%)
Frame = +2
Query: 710 FYAFGRVFSGKVVTGPKSRIMGPNFTPGKERGL 808
F+AFGRVFSG V TG K RIMGPNF PG+++ L
Sbjct: 394 FFAFGRVFSGTVATGNKVRIMGPNFVPGEKKDL 426
>05_05_0156 +
22792783-22793410,22797153-22797227,22797644-22798879,
22798947-22799155,22799240-22800209,22800395-22800465
Length = 1062
Score = 70.5 bits (165), Expect = 1e-12
Identities = 50/160 (31%), Positives = 80/160 (50%), Gaps = 5/160 (3%)
Frame = +1
Query: 256 KLMNRLWGENFFNPQTKKWSKQKDDDN--KRSFCMYVLDPIYKVFDAIMKFKKEEIDDLL 429
K+++RLWGENFF+ TKKW+K+ KR F + +PI ++ +A M K ++ +L
Sbjct: 420 KMIDRLWGENFFDLATKKWTKKNTGTATCKRGFVQFCYEPIREIMNACMN-SKHKLWPML 478
Query: 430 KKIGVTIKHEDSDKDGKALLKVVMRSCCLLVKLCFR*LPFIYHHL*WPRNIVWRC---YT 600
+KI VT+ + G L+K V+++ + C + +H+ P C +
Sbjct: 479 EKIHVTVSSPAKELVGIELVKYVIQA---WLPACSALSEMMMYHIPSPEKAQRHCVGNFG 535
Query: 601 XDPTMMXLPLVSRAVIPEAPLMMYVSKMVPTSDKGRFLRL 720
D + V R E PL++YVSKM KGR+ L
Sbjct: 536 VDLDNIYHTSV-RNCDAEGPLVLYVSKMTLALGKGRYFAL 574
Score = 58.8 bits (136), Expect = 5e-09
Identities = 25/64 (39%), Positives = 42/64 (65%)
Frame = +2
Query: 59 YQTFQRIVENVNVIIATYNDDGGPMGDVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYADK 238
YQT ++++VN ++++ D +V P+KG+V F SGLHGWA + F++MY+ K
Sbjct: 361 YQTLSSLIDSVNATMSSHKD-------AQVYPTKGTVVFSSGLHGWAVAISNFAKMYSSK 413
Query: 239 FKID 250
FK++
Sbjct: 414 FKVE 417
Score = 33.9 bits (74), Expect = 0.15
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 710 FYAFGRVFSGKVVTGPKSRIMGPNFTPGKERGL 808
++A GRVFSGKV +G + + P++ G+ + L
Sbjct: 571 YFALGRVFSGKVTSGMNVQFLSPSYGIGERKDL 603
>06_03_0715 -
23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 64.1 bits (149), Expect = 1e-10
Identities = 42/153 (27%), Positives = 78/153 (50%), Gaps = 5/153 (3%)
Frame = +1
Query: 256 KLMNRLWGENFFNPQTKKWSKQKDDDN-KRSFCMYVLDPIYKVFDAIMKFKKEEIDDLLK 432
K +RLWG+ +++P T+ + K+ + RSF +VL+P+YK++ ++ K +++ L
Sbjct: 362 KFASRLWGDLYYHPDTRTFKKKPPKEGANRSFVEFVLEPLYKIYSQVVGESKGKVEATLS 421
Query: 433 KIGVTIKHEDSDKDGKALLKVVMRS----CCLLVKLCFR*LPFIYHHL*WPRNIVWRCYT 600
++GVT+ + + + LL++ RS + + +P + PR I YT
Sbjct: 422 ELGVTLSNAAYKLNVRPLLRLACRSIFGTSTGFTDMLVKHIPSVKDAA--PRKIE-HIYT 478
Query: 601 XDPTMMXLPLVSRAVIPEAPLMMYVSKMVPTSD 699
P + + P APLM+ V+K+ P SD
Sbjct: 479 -GPQDSTIVDAMKKCDPHAPLMVNVTKLYPKSD 510
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/57 (36%), Positives = 34/57 (59%)
Frame = +2
Query: 59 YQTFQRIVENVNVIIATYNDDGGPMGDVRVDPSKGSVGFGSGLHGWAFTLKQFSEMY 229
Y + +E +N +I++ + G G VDP+ G+V F SG GW+FTL+ F+ +Y
Sbjct: 296 YFKLRHTLEAINDLISSCSTTVG--GTQLVDPAAGNVCFASGSAGWSFTLQSFAHLY 350
Score = 37.1 bits (82), Expect = 0.017
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +2
Query: 707 VFYAFGRVFSGKVVTGPKSRIMGPNFTPGKERGL 808
VF AFGRV+SG + TG R++G ++P E +
Sbjct: 513 VFDAFGRVYSGTIQTGQTVRVLGEGYSPDDEEDM 546
Score = 32.3 bits (70), Expect = 0.47
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +3
Query: 537 MIAIHLPSPVVAQKYRMEMLYXGPHDDXAAIGIKSCDS*SP 659
M+ H+PS A ++E +Y GP D +K CD +P
Sbjct: 457 MLVKHIPSVKDAAPRKIEHIYTGPQDSTIVDAMKKCDPHAP 497
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 37.9 bits (84), Expect = 0.009
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +2
Query: 152 PSKGSVGFGSGLHGWAFTLKQFSEMYADKF-KIDLASL*TG-YGEKTFSTLKR 304
P KG+V F L GW F + QF+E YA K I+ +L G +G + F K+
Sbjct: 210 PQKGNVVFACALDGWGFRIHQFAEFYAAKLPNINANALLKGLWGPRYFHKKKK 262
>04_04_1268 -
32262994-32263017,32263411-32263488,32263653-32263800,
32263890-32264127,32264210-32264420,32264499-32264680,
32264765-32264866,32265009-32266317,32266906-32266988,
32267436-32267559
Length = 832
Score = 31.9 bits (69), Expect = 0.62
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +3
Query: 108 HITMMVVPWVMCVSTLARALLVSGLVFMGGLSPSNNSLRCMLTNSRLTLQAYEQ 269
++ +VVP + CV L LV + G + N R ML N R + + YEQ
Sbjct: 512 YVVKVVVPIIACVLMLTCIYLVWKWISKGEKRNNENQNRAMLGNFRASHEVYEQ 565
>02_01_0580 +
4303020-4303211,4303838-4303879,4304538-4304646,
4304731-4304859,4305002-4305121,4305223-4305343,
4305888-4306044,4306377-4306427,4306573-4306695
Length = 347
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = -1
Query: 733 ENASKGVENDLCRRSAPSC-SRTSSVGLQESQLLIPMAAXSSWGPSYNISIRYFWATTG 560
+ + + E +C R C + T + + +++L IP WGP ++ + FW T G
Sbjct: 114 DTSDESDEQAICHRMVLVCGTSTCHMAVSKNKLFIP----GVWGPFWSAMVPEFWLTEG 168
>01_01_0857 - 6693460-6693991,6695086-6695165,6695508-6697448
Length = 850
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 667 MYVSKMVPTSDKGRFLRLWTRFLWQGCYRTKKS 765
+Y S+ TS K RFL+ W + + Q C T S
Sbjct: 470 LYFSRYAATSKKMRFLKCWMKQVKQQCLSTSSS 502
>07_03_1495 + 26983415-26984797
Length = 460
Score = 29.5 bits (63), Expect = 3.3
Identities = 23/85 (27%), Positives = 33/85 (38%), Gaps = 5/85 (5%)
Frame = +2
Query: 107 TYNDDGGPMGDVRVDPSKGSVGFGSGLHGWAF-----TLKQFSEMYADKFKIDLASL*TG 271
T + G D G G G G GW F TL SE + ++ DLA TG
Sbjct: 26 TEQEHAGSTSTPPTDDDVGGGGGGGGGGGWGFGGLLKTLTSQSETVLEAYRRDLAEFGTG 85
Query: 272 YGEKTFSTLKRRSGQNKRMMTTNVH 346
+T L+ + + R + + H
Sbjct: 86 LRRET-EALRDAAARAARDLPAHAH 109
>05_05_0098 +
22373384-22373522,22373566-22373772,22373879-22373953,
22374611-22374744,22375189-22375674,22375854-22376621,
22377367-22377594,22378294-22378773
Length = 838
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = -1
Query: 703 LCRRSAPSCSRTSSVGLQESQLLIP--MAAXSSWG 605
L RRSAPS SR L+ L+ P A S WG
Sbjct: 10 LSRRSAPSSSRARQASLRPLPLIFPESSATASGWG 44
>04_04_0378 -
24822436-24822521,24822623-24822738,24823010-24823092,
24823772-24823918,24824004-24824051,24824153-24824353,
24824981-24825152,24825235-24825299,24825813-24825939,
24826436-24826528,24826608-24826696,24826804-24826950,
24827047-24827359,24827474-24828048
Length = 753
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/32 (43%), Positives = 23/32 (71%)
Frame = +1
Query: 385 DAIMKFKKEEIDDLLKKIGVTIKHEDSDKDGK 480
DA+++ ++EIDD+ +IG + DSD+DGK
Sbjct: 661 DAMLQKLEKEIDDVDARIGNRWQLLDSDRDGK 692
>01_01_1159 +
9224331-9224473,9224586-9224727,9225412-9225483,
9225853-9225933,9226031-9226144,9226770-9226826,
9227209-9227310,9227617-9227767,9227851-9227927,
9228721-9228828,9229684-9229754,9230546-9230687,
9230903-9231001,9231112-9231240,9231445-9231559,
9231786-9231853,9233410-9233523,9233587-9233703,
9234079-9234132,9234221-9234326,9235272-9235402,
9235489-9235557
Length = 753
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +1
Query: 385 DAIMKFKKEEIDDLLKKIGVTIKHEDSDKDGKALLKVVM 501
D +K EEI +L+ +G+ +K ED +K+ K+V+
Sbjct: 573 DEAALYKNEEIQNLIVALGLGVKGEDFNKEALRYHKIVI 611
>07_01_0951 -
8001093-8001344,8001475-8001990,8002057-8002209,
8002272-8002568
Length = 405
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +3
Query: 216 SLRCMLTNSRLTLQAYEQVMGRKLFQPSNEEVV 314
+L CML+ SRL Y + G KLF S +EV+
Sbjct: 126 ALHCMLSYSRLRYSGYLPIKG-KLFPESRDEVL 157
>12_01_0231 + 1744323-1745276,1745516-1746193
Length = 543
Score = 28.3 bits (60), Expect = 7.6
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = -2
Query: 708 TTFVGGRHHLAHVHHQWGFRNHSS*YQWQLHHRGVXRITSPYDISGPLQVMV 553
TT G R L H H +H++ W L+HR R+ D++G + V++
Sbjct: 87 TTPAGRRPVLVHFHGGGFCLSHAA---WSLYHRFYARLAVELDVAGIVSVVL 135
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,952,872
Number of Sequences: 37544
Number of extensions: 507687
Number of successful extensions: 1500
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1408
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1488
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2209429392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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