Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0601
(811 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 125 3e-29
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 125 3e-29
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 52 5e-07
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 52 5e-07
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 42 4e-04
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 42 4e-04
AL021487-2|CAA16353.1| 413|Caenorhabditis elegans Hypothetical ... 29 3.0
Z48009-12|CAA88089.1| 1137|Caenorhabditis elegans Hypothetical p... 29 3.9
Z48007-3|CAA88054.1| 1137|Caenorhabditis elegans Hypothetical pr... 29 3.9
AC006629-9|ABC48255.1| 319|Caenorhabditis elegans Hypothetical ... 29 3.9
Z66521-11|CAA91398.2| 471|Caenorhabditis elegans Hypothetical p... 29 5.2
U00041-2|AAA50670.1| 128|Caenorhabditis elegans Hypothetical pr... 29 5.2
AB031233-1|BAA92262.1| 605|Caenorhabditis elegans kinesin like ... 29 5.2
U70855-5|AAB09160.2| 886|Caenorhabditis elegans Hypothetical pr... 28 6.9
U55857-10|AAA98035.2| 895|Caenorhabditis elegans Hypothetical p... 28 6.9
AC093703-5|AAL00865.1| 725|Caenorhabditis elegans Hypothetical ... 28 6.9
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 125 bits (302), Expect = 3e-29
Identities = 66/157 (42%), Positives = 93/157 (59%), Gaps = 5/157 (3%)
Frame = +1
Query: 256 KLMNRLWGENFFNPQTKKWSKQKDDDNKRSFCMYVLDPIYKVFDAIMKFKKEEIDDLLKK 435
KLM LWG+ FF+ +TKKWS + D++KR FC +VLDPI+ VFDA+M KK++ L++K
Sbjct: 253 KLMKNLWGDRFFDLKTKKWSSTQTDESKRGFCQFVLDPIFMVFDAVMNIKKDKTAALVEK 312
Query: 436 IGVTIKHEDSDKDGKALLKVVMRSCCLLVKLCFR*LPFIYHHL*WPRNIVWRCYTXD--- 606
+G+ + +++ D +GK L+KV MR L I HL P + + Y +
Sbjct: 313 LGIKLANDEKDLEGKPLMKVFMRKWLPAGDTM---LQMIAFHL--PSPVTAQKYRMEMLY 367
Query: 607 --PTMMXLPLVSRAVIPEAPLMMYVSKMVPTSDKGRF 711
P + + P PLMMY+SKMVPTSDKGRF
Sbjct: 368 EGPHDDEAAVAIKTCDPNGPLMMYISKMVPTSDKGRF 404
Score = 116 bits (279), Expect = 2e-26
Identities = 54/83 (65%), Positives = 62/83 (74%)
Frame = +2
Query: 59 YQTFQRIVENVNVIIATYNDDGGPMGDVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYADK 238
+QTFQRIVEN+NVIIATY DD GPMG + VDPS G+VGFGSGLHGWAFTLKQF+EMYA K
Sbjct: 187 FQTFQRIVENINVIIATYGDDDGPMGPIMVDPSIGNVGFGSGLHGWAFTLKQFAEMYAGK 246
Query: 239 FKIDLASL*TGYGEKTFSTLKRR 307
F + + L F LK +
Sbjct: 247 FGVQVDKLMKNLWGDRFFDLKTK 269
Score = 85.4 bits (202), Expect = 4e-17
Identities = 37/50 (74%), Positives = 41/50 (82%)
Frame = +3
Query: 510 LPAGEALLQMIAIHLPSPVVAQKYRMEMLYXGPHDDXAAIGIKSCDS*SP 659
LPAG+ +LQMIA HLPSPV AQKYRMEMLY GPHDD AA+ IK+CD P
Sbjct: 338 LPAGDTMLQMIAFHLPSPVTAQKYRMEMLYEGPHDDEAAVAIKTCDPNGP 387
Score = 56.8 bits (131), Expect = 2e-08
Identities = 24/33 (72%), Positives = 27/33 (81%)
Frame = +2
Query: 710 FYAFGRVFSGKVVTGPKSRIMGPNFTPGKERGL 808
FYAFGRVFSGKV TG K+RI GPN+ PGK+ L
Sbjct: 404 FYAFGRVFSGKVATGMKARIQGPNYVPGKKEDL 436
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 125 bits (302), Expect = 3e-29
Identities = 66/157 (42%), Positives = 93/157 (59%), Gaps = 5/157 (3%)
Frame = +1
Query: 256 KLMNRLWGENFFNPQTKKWSKQKDDDNKRSFCMYVLDPIYKVFDAIMKFKKEEIDDLLKK 435
KLM LWG+ FF+ +TKKWS + D++KR FC +VLDPI+ VFDA+M KK++ L++K
Sbjct: 253 KLMKNLWGDRFFDLKTKKWSSTQTDESKRGFCQFVLDPIFMVFDAVMNIKKDKTAALVEK 312
Query: 436 IGVTIKHEDSDKDGKALLKVVMRSCCLLVKLCFR*LPFIYHHL*WPRNIVWRCYTXD--- 606
+G+ + +++ D +GK L+KV MR L I HL P + + Y +
Sbjct: 313 LGIKLANDEKDLEGKPLMKVFMRKWLPAGDTM---LQMIAFHL--PSPVTAQKYRMEMLY 367
Query: 607 --PTMMXLPLVSRAVIPEAPLMMYVSKMVPTSDKGRF 711
P + + P PLMMY+SKMVPTSDKGRF
Sbjct: 368 EGPHDDEAAVAIKTCDPNGPLMMYISKMVPTSDKGRF 404
Score = 116 bits (279), Expect = 2e-26
Identities = 54/83 (65%), Positives = 62/83 (74%)
Frame = +2
Query: 59 YQTFQRIVENVNVIIATYNDDGGPMGDVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYADK 238
+QTFQRIVEN+NVIIATY DD GPMG + VDPS G+VGFGSGLHGWAFTLKQF+EMYA K
Sbjct: 187 FQTFQRIVENINVIIATYGDDDGPMGPIMVDPSIGNVGFGSGLHGWAFTLKQFAEMYAGK 246
Query: 239 FKIDLASL*TGYGEKTFSTLKRR 307
F + + L F LK +
Sbjct: 247 FGVQVDKLMKNLWGDRFFDLKTK 269
Score = 85.4 bits (202), Expect = 4e-17
Identities = 37/50 (74%), Positives = 41/50 (82%)
Frame = +3
Query: 510 LPAGEALLQMIAIHLPSPVVAQKYRMEMLYXGPHDDXAAIGIKSCDS*SP 659
LPAG+ +LQMIA HLPSPV AQKYRMEMLY GPHDD AA+ IK+CD P
Sbjct: 338 LPAGDTMLQMIAFHLPSPVTAQKYRMEMLYEGPHDDEAAVAIKTCDPNGP 387
Score = 56.8 bits (131), Expect = 2e-08
Identities = 24/33 (72%), Positives = 27/33 (81%)
Frame = +2
Query: 710 FYAFGRVFSGKVVTGPKSRIMGPNFTPGKERGL 808
FYAFGRVFSGKV TG K+RI GPN+ PGK+ L
Sbjct: 404 FYAFGRVFSGKVATGMKARIQGPNYVPGKKEDL 436
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 52.0 bits (119), Expect = 5e-07
Identities = 20/80 (25%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Frame = +1
Query: 268 RLWGENFFNPQTKKWSKQKDD-DNKRSFCMYVLDPIYKVFDAIMKFKKEEIDDLLKKIGV 444
RLWG+ +F +T+K+ K+ D R+F ++L+P+YK+F ++ + D++ ++G+
Sbjct: 346 RLWGDIYFEKKTRKFVKKSPSHDAPRTFVQFILEPMYKIFSQVVGDVDTCLPDVMAELGI 405
Query: 445 TIKHEDSDKDGKALLKVVMR 504
+ E+ + + L+ ++ +
Sbjct: 406 RLSKEEQKMNVRPLIALICK 425
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = +3
Query: 525 ALLQMIAIHLPSPVVAQKYRMEMLYXGPHDDXAAIGIKSCDS*SP 659
A + ++ ++ SP+ K ++E Y GP D A ++ C++ P
Sbjct: 433 AFVDLVVQNIKSPLENAKTKIEQTYLGPADSQLAQEMQKCNAEGP 477
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 52.0 bits (119), Expect = 5e-07
Identities = 20/80 (25%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Frame = +1
Query: 268 RLWGENFFNPQTKKWSKQKDD-DNKRSFCMYVLDPIYKVFDAIMKFKKEEIDDLLKKIGV 444
RLWG+ +F +T+K+ K+ D R+F ++L+P+YK+F ++ + D++ ++G+
Sbjct: 221 RLWGDIYFEKKTRKFVKKSPSHDAPRTFVQFILEPMYKIFSQVVGDVDTCLPDVMAELGI 280
Query: 445 TIKHEDSDKDGKALLKVVMR 504
+ E+ + + L+ ++ +
Sbjct: 281 RLSKEEQKMNVRPLIALICK 300
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = +3
Query: 525 ALLQMIAIHLPSPVVAQKYRMEMLYXGPHDDXAAIGIKSCDS*SP 659
A + ++ ++ SP+ K ++E Y GP D A ++ C++ P
Sbjct: 308 AFVDLVVQNIKSPLENAKTKIEQTYLGPADSQLAQEMQKCNAEGP 352
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 42.3 bits (95), Expect = 4e-04
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 11/79 (13%)
Frame = +2
Query: 59 YQTFQRIVENVNVIIATY-------NDDGGPMGD----VRVDPSKGSVGFGSGLHGWAFT 205
YQ R++E VN I+ +D G + + + DP+KG+V F S LH +AF
Sbjct: 160 YQHMSRLIEGVNSCISQVLGGIVLEDDTWGNIEESEAKLHFDPAKGNVIFSSALHSYAFG 219
Query: 206 LKQFSEMYADKFKIDLASL 262
+ F+++ A+K K++ ++L
Sbjct: 220 CEDFAQIAAEKMKVEKSAL 238
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 42.3 bits (95), Expect = 4e-04
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 11/79 (13%)
Frame = +2
Query: 59 YQTFQRIVENVNVIIATY-------NDDGGPMGD----VRVDPSKGSVGFGSGLHGWAFT 205
YQ R++E VN I+ +D G + + + DP+KG+V F S LH +AF
Sbjct: 160 YQHMSRLIEGVNSCISQVLGGIVLEDDTWGNIEESEAKLHFDPAKGNVIFSSALHSYAFG 219
Query: 206 LKQFSEMYADKFKIDLASL 262
+ F+++ A+K K++ ++L
Sbjct: 220 CEDFAQIAAEKMKVEKSAL 238
>AL021487-2|CAA16353.1| 413|Caenorhabditis elegans Hypothetical
protein Y45F10B.2 protein.
Length = 413
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/58 (25%), Positives = 31/58 (53%)
Frame = -1
Query: 775 SHDATFWSGNNLARENASKGVENDLCRRSAPSCSRTSSVGLQESQLLIPMAAXSSWGP 602
S +W G++ R+ + K END+CR+ R ++G+++ + + A+ +S P
Sbjct: 216 SSQQCYWKGSS--RQESKKNYENDICRK-----QRAKALGMKDLGIDVKPASSASSNP 266
>Z48009-12|CAA88089.1| 1137|Caenorhabditis elegans Hypothetical
protein AH6.1 protein.
Length = 1137
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 474 WQSFAEGCDALLLPAGEALLQMIAIHLPSPVVAQKY 581
W+SF EG D A +A +M + + S V +KY
Sbjct: 295 WESFTEGTDGFEKMAKQAATRMFVLDVNSEVADKKY 330
>Z48007-3|CAA88054.1| 1137|Caenorhabditis elegans Hypothetical
protein AH6.1 protein.
Length = 1137
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 474 WQSFAEGCDALLLPAGEALLQMIAIHLPSPVVAQKY 581
W+SF EG D A +A +M + + S V +KY
Sbjct: 295 WESFTEGTDGFEKMAKQAATRMFVLDVNSEVADKKY 330
>AC006629-9|ABC48255.1| 319|Caenorhabditis elegans Hypothetical
protein F12E12.10 protein.
Length = 319
Score = 29.1 bits (62), Expect = 3.9
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = -3
Query: 434 FLRRSSISSFLN-FMMASNTL*IGSKTYMQNERLLSSSFCFDHFFV*GLKKFSPHNLFIS 258
+L S+ SF++ FM A+N I ++ + LL F DH L FS H + I
Sbjct: 100 YLNGYSVRSFIDHFMQATNGRQIERIHFLCDLDLLDDRFLRDH-----LSGFSYHKVIID 154
Query: 257 LQGQS*ICQH 228
QG+S +H
Sbjct: 155 FQGRSVSPEH 164
>Z66521-11|CAA91398.2| 471|Caenorhabditis elegans Hypothetical
protein W02B12.7 protein.
Length = 471
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/63 (23%), Positives = 34/63 (53%)
Frame = +1
Query: 385 DAIMKFKKEEIDDLLKKIGVTIKHEDSDKDGKALLKVVMRSCCLLVKLCFR*LPFIYHHL 564
DAI++ +E+ DL +I V I+ D ++DG + ++ ++ L + + + + H+
Sbjct: 129 DAIIRELNDEVVDLRGQIRVAIRVRDFERDGSSNFSIISQNEVQLQQTTGQSNTYSFEHV 188
Query: 565 *WP 573
+P
Sbjct: 189 FFP 191
>U00041-2|AAA50670.1| 128|Caenorhabditis elegans Hypothetical
protein C03B8.3 protein.
Length = 128
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 379 VFDAIMKFKKEEIDDLLKKIGVTIKHED 462
+FDA+ K ++ +D K + VTI HED
Sbjct: 69 LFDALRKITADQYNDHKKVVEVTIDHED 96
>AB031233-1|BAA92262.1| 605|Caenorhabditis elegans kinesin like
protein protein.
Length = 605
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/63 (23%), Positives = 34/63 (53%)
Frame = +1
Query: 385 DAIMKFKKEEIDDLLKKIGVTIKHEDSDKDGKALLKVVMRSCCLLVKLCFR*LPFIYHHL 564
DAI++ +E+ DL +I V I+ D ++DG + ++ ++ L + + + + H+
Sbjct: 263 DAIIRELNDEVVDLRGQIRVAIRVRDFERDGSSNFSIISQNEVQLQQTTGQSNTYSFEHV 322
Query: 565 *WP 573
+P
Sbjct: 323 FFP 325
>U70855-5|AAB09160.2| 886|Caenorhabditis elegans Hypothetical
protein K08F11.2 protein.
Length = 886
Score = 28.3 bits (60), Expect = 6.9
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = +1
Query: 274 WGENFFNPQTKKWSKQKDDDNKRS 345
W N N + ++W K ++D+N +
Sbjct: 10 WSSNLLNARKRRWKKDEEDENSNT 33
>U55857-10|AAA98035.2| 895|Caenorhabditis elegans Hypothetical
protein K08D10.1 protein.
Length = 895
Score = 28.3 bits (60), Expect = 6.9
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = +1
Query: 274 WGENFFNPQTKKWSKQKDDDNKRS 345
W N N + ++W K ++D+N +
Sbjct: 10 WSSNLLNARKRRWKKDEEDENSNT 33
>AC093703-5|AAL00865.1| 725|Caenorhabditis elegans Hypothetical
protein Y20F4.5 protein.
Length = 725
Score = 28.3 bits (60), Expect = 6.9
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = +1
Query: 274 WGENFFNPQTKKWSKQKDDDNKRS 345
W N N + ++W K ++D+N +
Sbjct: 10 WSSNLLNARKRRWKKDEEDENSNT 33
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,274,915
Number of Sequences: 27780
Number of extensions: 431005
Number of successful extensions: 1375
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1266
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1372
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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