Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0593
         (992 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    30   0.024
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    30   0.024
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   2.8  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   8.5  

>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 30.3 bits (65), Expect = 0.024
 Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
 Frame = +1

Query: 394 EFKYKMEMEIKDE-NLRNSVPFVRQLSTDSVKTKTEYDNGMEHRTNLQL 537
           E K+ M+  IK+   L  SVPF+ ++S   ++TKT Y    +   NLQ+
Sbjct: 344 ELKF-MDRVIKESLRLYPSVPFISRVSGSEIQTKTGYTIPKDCMVNLQI 391


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 30.3 bits (65), Expect = 0.024
 Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
 Frame = +1

Query: 394 EFKYKMEMEIKDE-NLRNSVPFVRQLSTDSVKTKTEYDNGMEHRTNLQL 537
           E K+ M+  IK+   L  SVPF+ ++S   ++TKT Y    +   NLQ+
Sbjct: 344 ELKF-MDRVIKESLRLYPSVPFISRVSGSEIQTKTGYTIPKDCMVNLQI 391


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 375 SDQFRKRIQIQNGNGNQG 428
           SD   K ++  NGNG +G
Sbjct: 387 SDHLAKHVKTHNGNGKKG 404


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +1

Query: 169 SWSQIRPGAFETNALSVN 222
           SWSQ RPGA +     +N
Sbjct: 530 SWSQKRPGAGKFTPEDIN 547


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 238,759
Number of Sequences: 336
Number of extensions: 5268
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 28237209
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)