Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0593
         (992 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_07_0152 + 28044733-28045032,28045131-28045220,28045770-280458...    44   2e-04
05_07_0151 + 28038178-28038480,28038578-28038667,28039130-280391...    40   0.003
05_07_0239 - 28599452-28599564,28599685-28599799,28600051-286001...    33   0.27 
02_02_0241 - 8204430-8205398                                           30   2.5  
07_03_0744 + 21121757-21122202,21122316-21122737,21122992-211231...    30   3.3  

>05_07_0152 +
           28044733-28045032,28045131-28045220,28045770-28045829,
           28045912-28045977,28046161-28046226,28046330-28046405,
           28046721-28046785,28046879-28046971,28047302-28047322,
           28047600-28047692,28047939-28047998,28048157-28048222,
           28048314-28048373,28048498-28048612,28048738-28048850
          Length = 447

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 32/127 (25%), Positives = 55/127 (43%), Gaps = 1/127 (0%)
 Frame = +3

Query: 564 LAAFAVSVGSMNVGFSSGYTSPAVLTMNITLDITKEEITWVGGLCR*QLWSXALLA-DFD 740
           L    V++G +  GF+ G++SP    +   LD+T  E +  G L        A+ +    
Sbjct: 64  LCTLIVALGPIQFGFTGGFSSPTQDAIIRDLDLTLSEFSVFGSLSNVGAMVGAIASGQMA 123

Query: 741 RIPRKKKAIMGTAVPFTIXWMLIANAINV*WXLLGRVYAGCXLESXSLAFPGYXGGTXSX 920
               +K ++M  A+P  I W+ I+ A +  +  +GR+  G  +   S   P Y       
Sbjct: 124 EYIGRKGSLMIAAIPNIIGWLAISFAKDSSFLYMGRLLEGFGVGVISYTVPVYIAEISPQ 183

Query: 921 GVXRALG 941
            +  ALG
Sbjct: 184 NMRGALG 190


>05_07_0151 +
           28038178-28038480,28038578-28038667,28039130-28039189,
           28039274-28039339,28039562-28039627,28039719-28039794,
           28039972-28040036,28040115-28040192,28040362-28040442,
           28040526-28040610,28040702-28040748,28040969-28041028,
           28041179-28041244,28041327-28041386,28041524-28041638,
           28041733-28041845
          Length = 476

 Score = 39.9 bits (89), Expect = 0.003
 Identities = 34/128 (26%), Positives = 55/128 (42%), Gaps = 2/128 (1%)
 Frame = +3

Query: 564 LAAFAVSVGSMNVGFSSGYTSPAVLTMNITLDITKEEITWVGGLCR*QLWSXALLAD--F 737
           L    V++G +  GF+SG++SP    +   L ++  E +  G L        A+ +    
Sbjct: 65  LCTLIVALGPIQFGFTSGFSSPTQDAIIRDLKLSISEFSAFGSLSNVGAMVGAIASGQMA 124

Query: 738 DRIPRKKKAIMGTAVPFTIXWMLIANAINV*WXLLGRVYAGCXLESXSLAFPGYXGGTXS 917
           + I RK   I+  AVP  I W+ I+ A +  +  +GR+  G  +   S   P Y      
Sbjct: 125 EYIGRKGSLIIA-AVPNIIGWLAISFAKDASFLYMGRLLEGFGVGVISYTVPVYIAEISH 183

Query: 918 XGVXRALG 941
                ALG
Sbjct: 184 QNTRGALG 191


>05_07_0239 -
           28599452-28599564,28599685-28599799,28600051-28600116,
           28600270-28600329,28600571-28600617,28601118-28601202,
           28601554-28601646,28601727-28601791,28601942-28602017,
           28602110-28602175,28603082-28603141,28603400-28603489,
           28603594-28603893
          Length = 411

 Score = 33.5 bits (73), Expect = 0.27
 Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
 Frame = +3

Query: 561 LLAAFAVSVGSMNVGFSSGYTSPAVLTMNITLDITKEEITWVGGLCR*QLWSXALLA-DF 737
           +L    V++G +  GF+ G++SP    +   L +T  E +  G L        A+ +   
Sbjct: 63  VLCTLIVALGPIQFGFTCGFSSPTQDAIISDLGLTLSEFSLFGSLSNVGAMVGAIASGQI 122

Query: 738 DRIPRKKKAIMGTAVPFTIXWMLIANA 818
                +K ++M  A+P  I W+ I+ A
Sbjct: 123 AEYIGRKGSLMIAAIPNIIGWLAISFA 149


>02_02_0241 - 8204430-8205398
          Length = 322

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = -2

Query: 274 WAPEYPGST*SCEGSAGC*R*ERWFRRHPGVFGTTS 167
           W+P+ P S  +  G   C     W  RHP VF + S
Sbjct: 139 WSPDRPASVRTFRGHEYCVYAAAWSARHPDVFASAS 174


>07_03_0744 +
           21121757-21122202,21122316-21122737,21122992-21123117,
           21123198-21123319,21123413-21123623,21123955-21124192,
           21124284-21124431,21124547-21124879
          Length = 681

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = -2

Query: 661 MSKVIFIVSTAG-DVYPDENPTFIEPTETANAARSCVHRNSF*VVDLYGVPS 509
           +S VIF+++    ++ P   P F   TE+A+++ SC  R+   V D YG  S
Sbjct: 618 ISSVIFMLTRENMELQPPAQPAFFFGTESASSSTSCGQRSY--VYDRYGFAS 667


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,837,332
Number of Sequences: 37544
Number of extensions: 560031
Number of successful extensions: 1272
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1226
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1269
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2905255520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)