Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0593
         (992 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    23   5.7  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   7.5  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   7.5  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    22   7.5  
AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase pro...    22   9.9  

>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 22.6 bits (46), Expect = 5.7
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 638 NNEYNFGHNKGRNN 679
           NN YN  HN+ R++
Sbjct: 422 NNHYNHNHNQARHS 435


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.2 bits (45), Expect = 7.5
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = +2

Query: 620 HITCCANNEYNFGHNKGRNNMGWGSMPLAAL 712
           HI+   + EY    N   N   W ++P+  L
Sbjct: 71  HISLTLDLEYELVENLQANEKPWSTLPIEDL 101


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.2 bits (45), Expect = 7.5
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = +2

Query: 620 HITCCANNEYNFGHNKGRNNMGWGSMPLAAL 712
           HI+   + EY    N   N   W ++P+  L
Sbjct: 109 HISLTLDLEYELVENLQANEKPWSTLPIEDL 139


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 22.2 bits (45), Expect = 7.5
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +3

Query: 726 LADFDRIPRKKKAI 767
           LADFDR+ R+ K++
Sbjct: 99  LADFDRLVRRAKSL 112


>AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase
          protein.
          Length = 85

 Score = 21.8 bits (44), Expect = 9.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 59 ILTLHANLIKSTGRSSVFW 3
          I+ LH N+  S   S++FW
Sbjct: 21 IIGLHNNMCTSLNLSNLFW 39


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 280,303
Number of Sequences: 438
Number of extensions: 5984
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 32895408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)