Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0587
(765 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_30637| Best HMM Match : No HMM Matches (HMM E-Value=.) 122 3e-28
SB_49315| Best HMM Match : Calreticulin (HMM E-Value=0) 71 8e-13
SB_29195| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.062
SB_35211| Best HMM Match : NS3_envE (HMM E-Value=2.3) 32 0.58
SB_51493| Best HMM Match : DNA_pol_B_2 (HMM E-Value=0.00067) 30 1.8
SB_47442| Best HMM Match : Linker_histone (HMM E-Value=1.4e-36) 29 3.1
SB_29956| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_23319| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_48987| Best HMM Match : Ank (HMM E-Value=2.7e-36) 29 3.1
SB_385| Best HMM Match : SRP54_N (HMM E-Value=1.1) 29 4.1
SB_26858| Best HMM Match : ANF_receptor (HMM E-Value=2.4e-15) 29 4.1
SB_10791| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_59346| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_27442| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_28048| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_5367| Best HMM Match : wnt (HMM E-Value=0) 29 5.4
SB_50622| Best HMM Match : Omega-toxin (HMM E-Value=3.1) 28 9.5
SB_37330| Best HMM Match : S-antigen (HMM E-Value=4.1e-09) 28 9.5
SB_39578| Best HMM Match : DUF1213 (HMM E-Value=0.032) 28 9.5
>SB_30637| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1137
Score = 122 bits (294), Expect = 3e-28
Identities = 56/74 (75%), Positives = 61/74 (82%), Gaps = 5/74 (6%)
Frame = +2
Query: 503 HQKDIRC-----KDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWDFLPPKKIKDP 667
H+++I C KDD THLYTLIV+PDNTYEV IDNEKVESG+LE DWDFLPPK IKDP
Sbjct: 835 HEQNIDCGGGYAKDDEMTHLYTLIVRPDNTYEVKIDNEKVESGELEKDWDFLPPKTIKDP 894
Query: 668 EAKKPEDWDDKPTI 709
EAKKPEDWDDK I
Sbjct: 895 EAKKPEDWDDKKMI 908
Score = 70.5 bits (165), Expect = 1e-12
Identities = 32/52 (61%), Positives = 36/52 (69%)
Frame = +1
Query: 97 VFFEEKFPDDSWESNWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDA 252
V F EKF D SWE WV S G + GKFK TAGKF+ D E DKG++TSEDA
Sbjct: 756 VHFLEKFEDKSWEDRWVSSTSKGAQQGKFKWTAGKFYGDAEADKGIQTSEDA 807
Score = 67.7 bits (158), Expect = 1e-11
Identities = 29/40 (72%), Positives = 35/40 (87%), Gaps = 1/40 (2%)
Frame = +3
Query: 252 EFYALSRKF-KPFSNEGKPLVVQFTVKHEQDIDCGGGYLK 368
+FY +S KF KPF+NEGK LV+QF+VKHEQ+IDCGGGY K
Sbjct: 808 KFYGISAKFEKPFTNEGKTLVIQFSVKHEQNIDCGGGYAK 847
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = +2
Query: 629 DWDFLPPKKIKDPEAKKPEDWDDK 700
DWD P+ I DP+AKKPEDWDD+
Sbjct: 918 DWD--KPQNIPDPDAKKPEDWDDE 939
Score = 32.3 bits (70), Expect = 0.44
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +1
Query: 715 NPEDKKLQDWGKPEHIP 765
+PEDKK +DW KP++IP
Sbjct: 910 DPEDKKPEDWDKPQNIP 926
>SB_49315| Best HMM Match : Calreticulin (HMM E-Value=0)
Length = 1086
Score = 71.3 bits (167), Expect = 8e-13
Identities = 32/63 (50%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Frame = +2
Query: 527 DDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADW--DFLPPKKIKDPEAKKPEDWDDK 700
D THL+TL+V+PDNT+EV ID E V G L D PP +I+DP+ K+PEDWD++
Sbjct: 87 DGKKTHLFTLVVRPDNTFEVFIDQESVNKGSLLEDMTPPVNPPAEIEDPDDKRPEDWDER 146
Query: 701 PTI 709
I
Sbjct: 147 EKI 149
Score = 45.2 bits (102), Expect = 6e-05
Identities = 24/51 (47%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +3
Query: 378 CKLEQKDMHGETPYEIMFGPDICGPGTKKVHVIFSYKG-KNHLIKKISAAK 527
C L Q+ +TPY IMFGPD CG +K+H IF +K KN I++ A K
Sbjct: 28 CHLFQESFGDKTPYTIMFGPDKCGE-DRKLHFIFRHKNPKNGTIEEKHAKK 77
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/40 (50%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = +2
Query: 593 DNEKVESGDLEA--DWDFLPPKKIKDPEAKKPEDW-DDKP 703
+ EK+ D E DWD P KI D AKKPE W DD+P
Sbjct: 145 EREKIPDPDAEKPDDWDEDAPVKIPDTNAKKPEGWLDDEP 184
Score = 30.3 bits (65), Expect = 1.8
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +2
Query: 647 PKKIKDPEAKKPEDWDDK 700
P+ + DP KPEDWDD+
Sbjct: 184 PEYVPDPNGIKPEDWDDE 201
>SB_29195| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 35.1 bits (77), Expect = 0.062
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -3
Query: 355 PPQSMSCSCLTVNWTTKGLPSLLNG 281
P + SC CL V W T GLP L++G
Sbjct: 429 PSEQNSCQCLFVGWQTVGLPQLIHG 453
>SB_35211| Best HMM Match : NS3_envE (HMM E-Value=2.3)
Length = 187
Score = 31.9 bits (69), Expect = 0.58
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Frame = +2
Query: 527 DDVYTHLYTLIVKPDNTYEVLIDNE-KVESGDLEADWDFLPP--KKIKDPEAKKPED--W 691
DD++T + T+ KP + L D++ +SGD+ AD P KK K A ED +
Sbjct: 82 DDLFT-VKTVERKPRKVNKPLGDDDLSGDSGDIFADVPSKPKEKKKKKPAAASASEDSIF 140
Query: 692 DDKPTISRTPK 724
D+KPT +T K
Sbjct: 141 DEKPTFDKTTK 151
>SB_51493| Best HMM Match : DNA_pol_B_2 (HMM E-Value=0.00067)
Length = 1873
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = +1
Query: 94 DVFFEEKFPDDSWESNWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDASSMLSPV 273
+VF + D + + +++ E G G L AG P +G ED+SSM +
Sbjct: 950 EVFTIGQVYDHTTPTAYIFHEWDGDALGGAPLRAGATEVYPRGSRGNTMGEDSSSMYVTL 1009
Query: 274 SSN 282
SSN
Sbjct: 1010 SSN 1012
>SB_47442| Best HMM Match : Linker_histone (HMM E-Value=1.4e-36)
Length = 650
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +2
Query: 647 PKKIKDPEAKK-PEDWDDKPTISRTPK 724
PKK K P AKK P+ KP +TPK
Sbjct: 606 PKKAKKPAAKKSPKKLSKKPAAKKTPK 632
>SB_29956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 114
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/28 (53%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Frame = +2
Query: 647 PKKIKDPEAKKPEDWDDKP--TISRTPK 724
PK+ K PE KKP+ D P TI TPK
Sbjct: 21 PKESKKPETKKPKKPDTAPKATIKATPK 48
>SB_23319| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/28 (53%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Frame = +2
Query: 647 PKKIKDPEAKKPEDWDDKP--TISRTPK 724
PK+ K PE KKP+ D P TI TPK
Sbjct: 118 PKESKKPETKKPKKPDTAPKATIKATPK 145
>SB_48987| Best HMM Match : Ank (HMM E-Value=2.7e-36)
Length = 551
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +2
Query: 512 DIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWD 637
D+ CKDD V D T E L+D+ +V+S L D D
Sbjct: 485 DVSCKDDKNRTALHWAVGQDKTIEGLLDDPRVQSLQLVNDQD 526
>SB_385| Best HMM Match : SRP54_N (HMM E-Value=1.1)
Length = 210
Score = 29.1 bits (62), Expect = 4.1
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +2
Query: 569 DNTYEVLIDNEKVESGDLEADWDF-LPPKKIKDPEAKKPEDWDDKPTISRTP 721
D++ E DN+ + GD+E D + PPKK K E+K K + S+TP
Sbjct: 40 DDSEEEEDDNDD-DDGDIEGDEEADEPPKKKKKAESKPKSAEKSKSSKSKTP 90
>SB_26858| Best HMM Match : ANF_receptor (HMM E-Value=2.4e-15)
Length = 846
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +2
Query: 641 LPPKKIKDPEAKKPEDWDDKPTISRTPKTRSFRIGASLN 757
+ P+ P P D D+ P +R P TR+ R+ AS N
Sbjct: 802 ITPRTPATPTIPTPPDLDE-PFTARAPTTRTMRLNASFN 839
>SB_10791| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 510
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 593 DNEKVESGDLEADWDFLPPKKIKDPEAKKPE 685
D++ + GD E + FLPP + E+K PE
Sbjct: 106 DSDNGDKGDSEDEESFLPPSIFDESESKGPE 136
>SB_59346| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 684
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = -3
Query: 523 AADIFLMRWFLPL*LKITCTFLVPGPQMSGPNIISYGV 410
AAD +RW L +IT +V G + SGP I+ GV
Sbjct: 567 AADFSFVRWVQSLAERITSRVVVEGQKRSGP-IVDLGV 603
>SB_27442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 165
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/32 (40%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +2
Query: 599 EKVESGDLEADWD-FLPPKKIKDPEAKKPEDW 691
EKV +G++ ++D LPP++ K PE+ PE +
Sbjct: 48 EKVWTGEVWREFDPLLPPRRQKGPESLDPETY 79
>SB_28048| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 125
Score = 28.7 bits (61), Expect = 5.4
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = -1
Query: 159 VLTVHPIAFPRIIRKLLLKEYI 94
+LT H + P++IRK+ LK+Y+
Sbjct: 73 LLTAHLVVAPKLIRKMPLKDYV 94
>SB_5367| Best HMM Match : wnt (HMM E-Value=0)
Length = 367
Score = 28.7 bits (61), Expect = 5.4
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = -2
Query: 617 RQIQLSHCQ*GLHRCCQVSQSECTNVCRHHLCS 519
+++Q + C+ H CC+V C H+C+
Sbjct: 335 KEVQATRCRCKFHWCCKVKCKTCIKNVTTHICN 367
>SB_50622| Best HMM Match : Omega-toxin (HMM E-Value=3.1)
Length = 320
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/80 (21%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = +1
Query: 85 INCDVFFEEKFPDDSWESNWVYSEHPG-KEFGKFKLTAGKFFSDPEDDKGLKTSEDASSM 261
IN ++ +EK P E +W+ + P K++ ++ + S+ + +G ++ E +
Sbjct: 132 INFNITVKEKIPFFQEEEDWIDFQQPAEKDYSGLRIQTLQ-ISEKSEQEGAESCEQEEND 190
Query: 262 LSPVSSNRSVMRVNPW*SSS 321
+ R NPW S +
Sbjct: 191 ENGDGGQRKDKSNNPWQSGT 210
>SB_37330| Best HMM Match : S-antigen (HMM E-Value=4.1e-09)
Length = 818
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 148 YSEHPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDASSM 261
+ K+ GKFK AG+ +D +D G + EDAS +
Sbjct: 550 HKRRKSKDGGKFK--AGESTADSHEDSGKEQEEDASKV 585
>SB_39578| Best HMM Match : DUF1213 (HMM E-Value=0.032)
Length = 521
Score = 27.9 bits (59), Expect = 9.5
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +1
Query: 226 KGLKTSEDASSMLSPVSSNRSVMRVNPW*SSSLSNMNKTLTVEADTS--RSLTAN 384
K LKTS S +SP +S ++ + +P +S +++N +L TS RSL N
Sbjct: 360 KSLKTSPKTSPEISPRTSPKTSSKTSPK-TSLKTSLNTSLNTSQKTSLKRSLNTN 413
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,801,638
Number of Sequences: 59808
Number of extensions: 595250
Number of successful extensions: 1716
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1558
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1704
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2072022557
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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