Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0587
(765 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g56340.1 68414.m06476 calreticulin 1 (CRT1) identical to calr... 124 5e-29
At1g09210.1 68414.m01028 calreticulin 2 (CRT2) identical to SP|Q... 124 9e-29
At1g08450.1 68414.m00934 calreticulin 3 (CRT3) identical to simi... 112 2e-25
At1g08450.2 68414.m00935 calreticulin 3 (CRT3) identical to simi... 68 8e-12
At5g07340.1 68418.m00838 calnexin, putative identical to calnexi... 64 7e-11
At5g61790.1 68418.m07754 calnexin 1 (CNX1) identical to calnexin... 64 1e-10
At5g56820.1 68418.m07090 F-box family protein contains F-box dom... 33 0.16
At5g55810.1 68418.m06955 nicotinamide-nucleotide adenylyltransfe... 32 0.36
At1g74170.1 68414.m08590 leucine-rich repeat family protein cont... 31 0.84
At3g14670.1 68416.m01856 hypothetical protein 31 1.1
At5g22690.1 68418.m02651 disease resistance protein (TIR-NBS-LRR... 30 1.5
At1g74190.1 68414.m08592 leucine-rich repeat family protein cont... 30 1.5
At2g15695.1 68415.m01797 expressed protein contains Pfam PF05705... 30 1.9
At1g67180.1 68414.m07642 zinc finger (C3HC4-type RING finger) fa... 29 3.4
At1g60890.1 68414.m06855 phosphatidylinositol-4-phosphate 5-kina... 29 3.4
At3g27740.1 68416.m03463 carbamoyl-phosphate synthase [glutamine... 29 4.5
At3g02885.1 68416.m00283 gibberellin-regulated protein 5 (GASA5)... 29 4.5
At3g31540.1 68416.m04025 hypothetical protein 28 5.9
At1g68185.1 68414.m07789 ubiquitin-related similar to ubiquitin-... 28 5.9
At5g35210.2 68418.m04175 peptidase M50 family protein / sterol-r... 28 7.8
At5g35210.1 68418.m04174 peptidase M50 family protein / sterol-r... 28 7.8
At3g19840.1 68416.m02513 FF domain-containing protein / WW domai... 28 7.8
>At1g56340.1 68414.m06476 calreticulin 1 (CRT1) identical to
calreticulin (crt1) GI:2052379 [Arabidopsis thaliana]
Length = 425
Score = 124 bits (300), Expect = 5e-29
Identities = 62/127 (48%), Positives = 77/127 (60%), Gaps = 1/127 (0%)
Frame = +3
Query: 174 WKV*IDCWKVLQRPRG*QRFENL*RCEFYALSRKFKPFSNEGKPLVVQFTVKHEQDIDCG 353
WK W +G Q E+ FYA+S +F FSN+ K LV QF+VKHEQ +DCG
Sbjct: 53 WKHTAGNWSGDANDKGIQTSEDY---RFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCG 109
Query: 354 GGYLKVFDCKLEQKDMHGETPYEIMFGPDICGPGTKKVHVIFSYKGKNHLIKK-ISAAKM 530
GGY+K+ ++Q G+TPY IMFGPDICG TKKVH I +Y G NHLIKK +
Sbjct: 110 GGYMKLLSDDVDQTKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNHLIKKEVPCETD 169
Query: 531 MSTHICT 551
TH+ T
Sbjct: 170 QLTHVYT 176
Score = 98.7 bits (235), Expect = 4e-21
Identities = 40/75 (53%), Positives = 54/75 (72%)
Frame = +2
Query: 506 QKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWDFLPPKKIKDPEAKKPE 685
+K++ C+ D TH+YT +++PD TY +LIDN + ++G L +DWD LP KKIKDP AKKPE
Sbjct: 161 KKEVPCETDQLTHVYTFVLRPDATYSILIDNVEKQTGSLYSDWDLLPAKKIKDPSAKKPE 220
Query: 686 DWDDKPTISRTPKTR 730
DWDDK I T+
Sbjct: 221 DWDDKEYIPDPEDTK 235
Score = 48.0 bits (109), Expect = 7e-06
Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Frame = +1
Query: 85 INCDVFFEEKFPDDSWESNWVYSE--HPGKEFGKFKLTAGKFFSDPEDDKGLKTSED 249
++ +V FEEKF +D WE WV S+ G++K TAG + D +DKG++TSED
Sbjct: 20 VSAEVIFEEKF-EDGWEKRWVKSDWKKDDNTAGEWKHTAGNWSGD-ANDKGIQTSED 74
>At1g09210.1 68414.m01028 calreticulin 2 (CRT2) identical to
SP|Q38858 Calreticulin 2 precursor {Arabidopsis
thaliana}
Length = 424
Score = 124 bits (298), Expect = 9e-29
Identities = 62/127 (48%), Positives = 77/127 (60%), Gaps = 1/127 (0%)
Frame = +3
Query: 174 WKV*IDCWKVLQRPRG*QRFENL*RCEFYALSRKFKPFSNEGKPLVVQFTVKHEQDIDCG 353
WK W +G Q E+ FYA+S +F FSN+ K LV QF+VKHEQ +DCG
Sbjct: 53 WKHTAGNWSGDANDKGIQTSEDY---RFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCG 109
Query: 354 GGYLKVFDCKLEQKDMHGETPYEIMFGPDICGPGTKKVHVIFSYKGKNHLIKK-ISAAKM 530
GGY+K+ ++QK G+TPY IMFGPDICG TKKVH I +Y NHLIKK +
Sbjct: 110 GGYMKLLSGDVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNEANHLIKKDVPCETD 169
Query: 531 MSTHICT 551
TH+ T
Sbjct: 170 QLTHVYT 176
Score = 101 bits (243), Expect = 4e-22
Identities = 41/69 (59%), Positives = 54/69 (78%)
Frame = +2
Query: 506 QKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWDFLPPKKIKDPEAKKPE 685
+KD+ C+ D TH+YT I++PD TY +LIDN + ++G L +DWD LPPKKIKDP AKKPE
Sbjct: 161 KKDVPCETDQLTHVYTFILRPDATYSILIDNVEKQTGSLYSDWDLLPPKKIKDPSAKKPE 220
Query: 686 DWDDKPTIS 712
DWD++ IS
Sbjct: 221 DWDEQEYIS 229
Score = 47.6 bits (108), Expect = 9e-06
Identities = 26/53 (49%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Frame = +1
Query: 97 VFFEEKFPDDSWESNWVYSE--HPGKEFGKFKLTAGKFFSDPEDDKGLKTSED 249
V FEE+F DD WE+ WV SE G++K TAG + D +DKG++TSED
Sbjct: 24 VIFEERF-DDGWENRWVKSEWKKDDNTAGEWKHTAGNWSGD-ANDKGIQTSED 74
Score = 34.7 bits (76), Expect = 0.068
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +2
Query: 647 PKKIKDPEAKKPEDWDDK 700
PK+I D ++KKPEDWDD+
Sbjct: 243 PKEIPDTDSKKPEDWDDE 260
>At1g08450.1 68414.m00934 calreticulin 3 (CRT3) identical to similar
to SP|O04153 Calreticulin 3 precursor {Arabidopsis
thaliana}
Length = 424
Score = 112 bits (270), Expect = 2e-25
Identities = 49/85 (57%), Positives = 64/85 (75%)
Frame = +3
Query: 258 YALSRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGP 437
YA+S K FSN+ + LVVQ++VK EQDI+CGG Y+K+ + QK G+TPY +MFGP
Sbjct: 84 YAISAKIPEFSNKNRTLVVQYSVKIEQDIECGGAYIKLLSGYVNQKQFGGDTPYSLMFGP 143
Query: 438 DICGPGTKKVHVIFSYKGKNHLIKK 512
DICG TKK+HVI SY+G+N+ IKK
Sbjct: 144 DICGTQTKKLHVIVSYQGQNYPIKK 168
Score = 90.6 bits (215), Expect = 1e-18
Identities = 36/68 (52%), Positives = 49/68 (72%)
Frame = +2
Query: 506 QKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWDFLPPKKIKDPEAKKPE 685
+KD++C+ D H YT I++PD +Y VL+DN++ E G + DWD LPP+KIK AKKPE
Sbjct: 167 KKDLQCETDKLNHFYTFILRPDASYSVLVDNKEREFGSMYTDWDILPPRKIKVKNAKKPE 226
Query: 686 DWDDKPTI 709
DWDD+ I
Sbjct: 227 DWDDREYI 234
Score = 45.6 bits (103), Expect = 4e-05
Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Frame = +1
Query: 94 DVFFEEKFPDDSWESNWVYSEHPGKE--FGKFKLTAGKFFSDPEDDKGLKTSEDA 252
++F EE F + W+S WV S+ E G FK TAGK+ DP D+KG++T DA
Sbjct: 29 EIFLEEHF-EGGWKSRWVLSDWKRNEGKAGTFKHTAGKWPGDP-DNKGIQTYNDA 81
Score = 30.7 bits (66), Expect = 1.1
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +2
Query: 647 PKKIKDPEAKKPEDWDDK 700
P++I D +AK+PEDWD++
Sbjct: 249 PREIPDRKAKEPEDWDEE 266
>At1g08450.2 68414.m00935 calreticulin 3 (CRT3) identical to similar
to SP|O04153 Calreticulin 3 precursor {Arabidopsis
thaliana}
Length = 370
Score = 67.7 bits (158), Expect = 8e-12
Identities = 28/57 (49%), Positives = 40/57 (70%)
Frame = +3
Query: 258 YALSRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIM 428
YA+S K FSN+ + LVVQ++VK EQDI+CGG Y+K+ + QK G+TPY ++
Sbjct: 84 YAISAKIPEFSNKNRTLVVQYSVKIEQDIECGGAYIKLLSGYVNQKQFGGDTPYSVL 140
Score = 66.1 bits (154), Expect = 2e-11
Identities = 27/47 (57%), Positives = 33/47 (70%)
Frame = +2
Query: 569 DNTYEVLIDNEKVESGDLEADWDFLPPKKIKDPEAKKPEDWDDKPTI 709
D Y VL+DN++ E G + DWD LPP+KIK AKKPEDWDD+ I
Sbjct: 134 DTPYSVLVDNKEREFGSMYTDWDILPPRKIKVKNAKKPEDWDDREYI 180
Score = 45.6 bits (103), Expect = 4e-05
Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Frame = +1
Query: 94 DVFFEEKFPDDSWESNWVYSEHPGKE--FGKFKLTAGKFFSDPEDDKGLKTSEDA 252
++F EE F + W+S WV S+ E G FK TAGK+ DP D+KG++T DA
Sbjct: 29 EIFLEEHF-EGGWKSRWVLSDWKRNEGKAGTFKHTAGKWPGDP-DNKGIQTYNDA 81
Score = 30.7 bits (66), Expect = 1.1
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +2
Query: 647 PKKIKDPEAKKPEDWDDK 700
P++I D +AK+PEDWD++
Sbjct: 195 PREIPDRKAKEPEDWDEE 212
>At5g07340.1 68418.m00838 calnexin, putative identical to calnexin
homolog 2 from Arabidopsis thaliana [SP|Q38798], strong
similarity to calnexin homolog 1, Arabidopsis thaliana,
EMBL:AT08315 [SP|P29402]; contains Pfam profile PF00262
calreticulin family
Length = 532
Score = 64.5 bits (150), Expect = 7e-11
Identities = 29/64 (45%), Positives = 42/64 (65%), Gaps = 4/64 (6%)
Frame = +2
Query: 530 DVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWDFLPP----KKIKDPEAKKPEDWDD 697
D+ +H+YT ++K DN +L+D E+ + G+L + DF PP K I DPE KKPEDWD+
Sbjct: 179 DMLSHVYTAVLKSDNEVRILVDGEEKKKGNLLSAEDFEPPLIPSKTIPDPEDKKPEDWDE 238
Query: 698 KPTI 709
+ I
Sbjct: 239 RAKI 242
Score = 54.4 bits (125), Expect = 8e-08
Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Frame = +3
Query: 291 NEGKPLVVQFTVKHEQDIDCGGGYLKVF---DCKLEQKDMHGETPYEIMFGPDICGPGTK 461
NEG +V+Q+ + ++ ++CGG YLK + + ++PY IMFGPD CG T
Sbjct: 92 NEGT-VVLQYEARFQEGLECGGAYLKYLRPQEAGWVPQGFDNDSPYSIMFGPDKCG-ATN 149
Query: 462 KVHVIFSYK 488
KVH I +K
Sbjct: 150 KVHFILKHK 158
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = +2
Query: 560 VKPDNTYEVLIDNEKVESGDLEADWDFLPPKKIKDPEAKKPEDWDDK 700
VKPD+ E + E + W P +++DPEA KPEDWDD+
Sbjct: 248 VKPDDWDEDAPMEIEDEEAEKPEGWLDDEPVEVEDPEASKPEDWDDE 294
>At5g61790.1 68418.m07754 calnexin 1 (CNX1) identical to calnexin
homolog 1, Arabidopsis thaliana, EMBL:AT08315
[SP|P29402]
Length = 530
Score = 63.7 bits (148), Expect = 1e-10
Identities = 29/64 (45%), Positives = 41/64 (64%), Gaps = 4/64 (6%)
Frame = +2
Query: 530 DVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWDF----LPPKKIKDPEAKKPEDWDD 697
D +H+YT I+KPDN +L+D E+ + +L + DF +P K I DPE KKPEDWD+
Sbjct: 177 DKLSHVYTAILKPDNEVRILVDGEEKKKANLLSGEDFEPALIPAKTIPDPEDKKPEDWDE 236
Query: 698 KPTI 709
+ I
Sbjct: 237 RAKI 240
Score = 58.8 bits (136), Expect = 4e-09
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Frame = +3
Query: 279 KPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVF---DCKLEQKDMHGETPYEIMFGPDICG 449
+P + + +V+Q+ V+ ++ ++CGG YLK + + E+PY IMFGPD CG
Sbjct: 85 EPLNLKEGTVVLQYEVRFQEGLECGGAYLKYLRPQEAGWTPQGFDSESPYSIMFGPDKCG 144
Query: 450 PGTKKVHVIFSYK 488
GT KVH I +K
Sbjct: 145 -GTNKVHFILKHK 156
Score = 37.9 bits (84), Expect = 0.007
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +2
Query: 560 VKPDNTYEVLIDNEKVESGDLEADWDFLPPKKIKDPEAKKPEDWDDK 700
VKP++ E + E + W P+++ DPEA KPEDWDD+
Sbjct: 246 VKPEDWDEDAPMEIEDEEAEKPEGWLDDEPEEVDDPEATKPEDWDDE 292
>At5g56820.1 68418.m07090 F-box family protein contains F-box domain
Pfam:PF00646
Length = 435
Score = 33.5 bits (73), Expect = 0.16
Identities = 19/72 (26%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = -2
Query: 212 SLKNFPAVNLNFPNSFPGC-SLYTQLLSHES-SGNFSSKNTSQFIEDNASKLTTTSTTAF 39
S+K+ P +++ PNS P C + + + L + +G K + +I NA +L T + + +
Sbjct: 332 SIKDQPNISVRKPNSVPECLTFHLETLEWQGYAGRPEDKEIAVYILGNALRLNTATISRY 391
Query: 38 IFDSQYHLLQQK 3
S++ Q+K
Sbjct: 392 FSSSRFRHHQKK 403
>At5g55810.1 68418.m06955 nicotinamide-nucleotide
adenylyltransferase, putative / NAD(+)
pyrophosphorylase, putative similar to nicotinamide
mononucleotide adenylyl transferase [Homo sapiens]
GI:11245478; contains Pfam profile PF01467:
Cytidylyltransferase
Length = 238
Score = 32.3 bits (70), Expect = 0.36
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +1
Query: 208 SDPEDDKGLKTSEDASSMLSPVSSNRSVMRVNPW*SSSLSNMNKTLTVEADTSRSLTANW 387
+D KGL ++E M + + + V+PW +S SN +TLTV + LT N
Sbjct: 64 NDAYKKKGLLSAEHRLEMCNVSCQSSDFVMVDPW-EASQSNYQRTLTVLSRVKTFLTTN- 121
Query: 388 SRRTCTERLH-MRLCSA 435
R E L M LC +
Sbjct: 122 -RHVPEESLKVMLLCGS 137
>At1g74170.1 68414.m08590 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; similar to Cf-2.2 [Lycopersicon
pimpinellifolium] gi|1184077|gb|AAC15780
Length = 1068
Score = 31.1 bits (67), Expect = 0.84
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +3
Query: 312 VQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEI 425
++F KH D GG +F L + ++ GE P E+
Sbjct: 830 IEFATKHRYDAYMGGNLKLLFGMDLSENELSGEIPVEL 867
>At3g14670.1 68416.m01856 hypothetical protein
Length = 232
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +2
Query: 602 KVESGDLEADWDFLPPKKIKDPEAKKPEDWDDK 700
K + GDLE D D K KDP+ K P++ D K
Sbjct: 169 KEKDGDLEKDGDQEKDPKEKDPKEKDPKEKDPK 201
>At5g22690.1 68418.m02651 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1008
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/70 (27%), Positives = 30/70 (42%)
Frame = +1
Query: 232 LKTSEDASSMLSPVSSNRSVMRVNPW*SSSLSNMNKTLTVEADTSRSLTANWSRRTCTER 411
LK+ D SS +S + NR+ + PW S + + E + ++ N S+ E
Sbjct: 717 LKSFPDISSNISELYLNRTAIEEVPWWIQKFSRLKRLRMRECKKLKCISPNISKLKHLEM 776
Query: 412 LHMRLCSALT 441
L C A T
Sbjct: 777 LDFSNCIATT 786
>At1g74190.1 68414.m08592 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to Cf-2.1
[Lycopersicon pimpinellifolium] gi|1184075|gb|AAC15779
Length = 965
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +3
Query: 312 VQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYE 422
++F KH D GG +F L + ++ GE P E
Sbjct: 762 IEFATKHRYDAYMGGNLKLLFGMDLSENELSGEIPVE 798
>At2g15695.1 68415.m01797 expressed protein contains Pfam PF05705:
Eukaryotic protein of unknown function (DUF829)
Length = 420
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -3
Query: 400 MSFCSSLQSKTLRYPPPQSMSCSCLTVNWTTKGLPSLLNGLNL 272
+ F S L K +P + MS V+W KG+ S L+GL L
Sbjct: 147 LDFTSDLNVKFALHPTIRRMSGPSRLVSWVAKGISSGLDGLYL 189
>At1g67180.1 68414.m07642 zinc finger (C3HC4-type RING finger)
family protein / BRCT domain-containing protein contains
Pfam domains PF00533: BRCA1 C Terminus (BRCT) domain and
PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 453
Score = 29.1 bits (62), Expect = 3.4
Identities = 22/68 (32%), Positives = 36/68 (52%)
Frame = +1
Query: 166 KEFGKFKLTAGKFFSDPEDDKGLKTSEDASSMLSPVSSNRSVMRVNPW*SSSLSNMNKTL 345
K+ K T K+FS+ +++ TSE A+ M V +NR +R+ SS+ NK
Sbjct: 108 KKVNKASETFDKYFSNGGENRSGSTSELATWMEKNVEANRHSVRLRTKRPSSILE-NKEN 166
Query: 346 TVEADTSR 369
+ A++SR
Sbjct: 167 SGVAESSR 174
>At1g60890.1 68414.m06855 phosphatidylinositol-4-phosphate 5-kinase
family protein similar to
phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1
[Arabidopsis thaliana] GI:3702691; contains Pfam
profiles PF01504: Phosphatidylinositol-4-phosphate
5-Kinase, PF02493: MORN repeat
Length = 769
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -2
Query: 140 LLSHESSGNFSSKNTSQFIEDNASKLTTTS 51
LLSH S+ N TS+ + + S+LTTTS
Sbjct: 218 LLSHNSTINIDDLRTSKAVSRSLSELTTTS 247
>At3g27740.1 68416.m03463 carbamoyl-phosphate synthase
[glutamine-hydrolyzing] (CARA) / glutamine-dependent
carbamoyl-phosphate synthase small subunit identical to
carbamoyl phosphate synthetase small subunit GI:2462781
[Arabidopsis thaliana]
Length = 430
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Frame = +2
Query: 506 QKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGD----LEADWDFLPPKKIKDPEA 673
++DI D+ T T ++ D + ++ E+ ++ D + WD + I D
Sbjct: 157 ERDIMGVYDLDTRAITRRLREDGSLIGVLSTEQSKTDDELLQMSRSWDIVGIDLISDVSC 216
Query: 674 KKPEDWDDK 700
K P +W DK
Sbjct: 217 KSPYEWVDK 225
>At3g02885.1 68416.m00283 gibberellin-regulated protein 5 (GASA5) /
gibberellin-responsive protein 5 identical to GASA5
[Arabidopsis thaliana] GI:1289320
Length = 97
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/37 (40%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
Frame = -3
Query: 406 PCMSFCSSLQSKTLRYPP---PQSMSCSCLTVNWTTK 305
PCM FC K L PP +C C NW TK
Sbjct: 55 PCMFFCLKCCKKCLCVPPGTFGNKQTCPCYN-NWKTK 90
>At3g31540.1 68416.m04025 hypothetical protein
Length = 699
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +2
Query: 521 CKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWDFLPP 649
CKDD YT + + D E L+ + G L+ FL P
Sbjct: 262 CKDDAYTDYFFFVALEDAVLEDLVGKVLTKWGILDRPIRFLEP 304
>At1g68185.1 68414.m07789 ubiquitin-related similar to
ubiquitin-like protein smt3/pmt3 SP:O13351 from [Fission
yeast]
Length = 215
Score = 28.3 bits (60), Expect = 5.9
Identities = 20/58 (34%), Positives = 24/58 (41%)
Frame = +2
Query: 563 KPDNTYEVLIDNEKVESGDLEADWDFLPPKKIKDPEAKKPEDWDDKPTISRTPKTRSF 736
K T E L D+ KV + DW PPK I D ED K S+ + SF
Sbjct: 42 KTSQTVEKLDDDVKVIEVTGDDDWLLPPPKVIFDKSKDSVEDSTIKALRSKKMELMSF 99
>At5g35210.2 68418.m04175 peptidase M50 family protein /
sterol-regulatory element binding protein (SREBP) site 2
protease family protein contains PFam PF02163:
sterol-regulatory element binding protein (SREBP) site 2
protease
Length = 1409
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = -2
Query: 545 NVCRHHLCSGYLFDEMVLTLVTEDYVYLLGSRTTNVRAEHNLIWS 411
NV HH+ + + +++L ED+V + R N + E WS
Sbjct: 980 NVLVHHVIMMFYYGNPLVSLSFEDFVTRIALRCLNTQMEMLKFWS 1024
>At5g35210.1 68418.m04174 peptidase M50 family protein /
sterol-regulatory element binding protein (SREBP) site 2
protease family protein contains PFam PF02163:
sterol-regulatory element binding protein (SREBP) site 2
protease
Length = 1576
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = -2
Query: 545 NVCRHHLCSGYLFDEMVLTLVTEDYVYLLGSRTTNVRAEHNLIWS 411
NV HH+ + + +++L ED+V + R N + E WS
Sbjct: 980 NVLVHHVIMMFYYGNPLVSLSFEDFVTRIALRCLNTQMEMLKFWS 1024
>At3g19840.1 68416.m02513 FF domain-containing protein / WW
domain-containing protein weak similarity to
transcription factor CA150b [Mus musculus] GI:6329166;
contains Pfam profiles PF01846: FF domain, PF00397: WW
domain
Length = 743
Score = 27.9 bits (59), Expect = 7.8
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +2
Query: 563 KPDNTYEVLIDNEKVESGDLEADWDFLPPKKIKDPEAKKPEDWDDKPTISRTPKTRS 733
K EV +K+ + + + L +KI+DPEA E KP + R P+ R+
Sbjct: 583 KEREVQEVERVRQKIRRKEASSSYQALLVEKIRDPEASWTE---SKPILERDPQKRA 636
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,214,471
Number of Sequences: 28952
Number of extensions: 418652
Number of successful extensions: 1294
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1285
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1712086600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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