Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0586
         (754 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   6.0  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   6.0  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    22   6.0  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   8.0  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   8.0  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +1

Query: 265 EYAYQLWMQGSEDIVRGLFPG*VHTYLS 348
           +Y  Q+W  GS+  VR L        LS
Sbjct: 440 KYIIQIWTTGSDPQVRNLLDNGYRVILS 467


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 13/48 (27%), Positives = 21/48 (43%)
 Frame = +1

Query: 412 RGCLRGQQRQDQFKSQLEIHSAVGEQQGLLQDKNTERKQNLALKVRTN 555
           R C +   R    K+ L  HS     + +  +K+  +  NL   VRT+
Sbjct: 253 RICGKSYARPSTLKTHLRTHSGEKPYRCIDCNKSFSQAANLTAHVRTH 300


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +3

Query: 663 NRDYSMAXTLSXTMDSXGNRXAWGIQR 743
           N DY  + T+S +    G   +WG  R
Sbjct: 261 NMDYLSSSTMSHSQFGNGLETSWGKSR 287


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 596  MVLGPSGTWFPLN 634
            ++ GPS TWF  N
Sbjct: 1138 VIYGPSDTWFDEN 1150


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -1

Query: 214 ELTLVIGVD*FASFNSRVVISN 149
           EL   IGV  F SF+  V +SN
Sbjct: 44  ELIKQIGVKEFDSFHDHVSVSN 65


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,472
Number of Sequences: 336
Number of extensions: 3433
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20131186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)