Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0586
         (754 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061631-1|AAL29179.1|  120|Drosophila melanogaster SD10843p pro...    29   5.2  
AE014296-1324|AAX52755.1|   87|Drosophila melanogaster CG7391-PE...    29   6.8  

>AY061631-1|AAL29179.1|  120|Drosophila melanogaster SD10843p
           protein.
          Length = 120

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -2

Query: 747 STVVSPRPXGYXSCPSSSTAXKPCCS 670
           ++V S RP    SCP++ TA + CC+
Sbjct: 15  TSVRSRRPGAAGSCPAAGTAPRSCCA 40


>AE014296-1324|AAX52755.1|   87|Drosophila melanogaster CG7391-PE,
           isoform E protein.
          Length = 87

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 20/63 (31%), Positives = 27/63 (42%)
 Frame = +1

Query: 421 LRGQQRQDQFKSQLEIHSAVGEQQGLLQDKNTERKQNLALKVRTNRNGDHMAYGVANFDG 600
           L  ++R+DQF S +   SA+        DK+T  K  +A     N NG     G  N  G
Sbjct: 22  LSEKKRRDQFNSLVNDLSALISTSSRKMDKSTVLKSTIAF--LKNHNGHRSLQGFRNTTG 79

Query: 601 FRA 609
             A
Sbjct: 80  LEA 82


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,748,073
Number of Sequences: 53049
Number of extensions: 672077
Number of successful extensions: 1769
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1769
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3437745267
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)