Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0586
         (754 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.    23   2.3  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    23   3.1  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   5.4  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   7.1  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   7.1  

>U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.
          Length = 53

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = -1

Query: 550 FGLSMPSSVCAQCSYLEVDLVVLPQRNEFPADS*TGP 440
           F  ++ +++CA  +Y+ +  V  P R  FP     GP
Sbjct: 6   FIFALLATICAAFAYVPLPNVPQPGRRPFPTFPGQGP 42


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 262 CSSLVVXYQIVYDICDEL 209
           CS +   Y+I  D+CD L
Sbjct: 116 CSGITSAYKIEIDMCDRL 133


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +2

Query: 272 PTSSGCKAPRTSSGDCFPVEFTLILAE 352
           PT   C   R ++G CF V +  +L +
Sbjct: 716 PTDIVCGIQRFAAGFCFTVVYAALLTK 742


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = +2

Query: 176 RSKLIYTDNKGELITNVVNNLIRNNKRTAWS 268
           ++ ++ ++N   L  N ++N   NN+RT WS
Sbjct: 367 KNDVLLSNNDVYLYQNTMSN---NNQRTEWS 394


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = +2

Query: 176 RSKLIYTDNKGELITNVVNNLIRNNKRTAWS 268
           ++ ++ ++N   L  N ++N   NN+RT WS
Sbjct: 405 KNDVLLSNNDVYLYQNTMSN---NNQRTEWS 432


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,902
Number of Sequences: 438
Number of extensions: 3989
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23632110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)