Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0585
         (531 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P77085 Cluster: Putative uncharacterized protein; n=4; ...    83   5e-15
UniRef50_Q2EES0 Cluster: Uncharacterized protein ynfO from qin p...    83   5e-15
UniRef50_Q7CQS6 Cluster: Pathogenicity island encoded protein: S...    45   0.001
UniRef50_UPI00015C552B Cluster: hypothetical protein CKO_01133; ...    43   0.004
UniRef50_Q8FII1 Cluster: Putative uncharacterized protein; n=1; ...    39   0.083
UniRef50_A5KA45 Cluster: Putative uncharacterized protein; n=2; ...    33   5.4  

>UniRef50_P77085 Cluster: Putative uncharacterized protein; n=4;
           Escherichia coli|Rep: Putative uncharacterized protein -
           Escherichia coli
          Length = 64

 Score = 82.6 bits (195), Expect = 5e-15
 Identities = 40/47 (85%), Positives = 40/47 (85%)
 Frame = -3

Query: 145 MSTKNXXXXXXXRNIRFPNQMIEQINIALEQKGSGNFSAWVIEACRR 5
           MSTKN       RNIRFPNQMIEQINIALEQKGSGNFSAWVIEACRR
Sbjct: 1   MSTKNRTRRTTTRNIRFPNQMIEQINIALEQKGSGNFSAWVIEACRR 47


>UniRef50_Q2EES0 Cluster: Uncharacterized protein ynfO from qin
           prophage; n=8; root|Rep: Uncharacterized protein ynfO
           from qin prophage - Escherichia coli (strain K12)
          Length = 77

 Score = 82.6 bits (195), Expect = 5e-15
 Identities = 40/47 (85%), Positives = 40/47 (85%)
 Frame = -3

Query: 145 MSTKNXXXXXXXRNIRFPNQMIEQINIALEQKGSGNFSAWVIEACRR 5
           MSTKN       RNIRFPNQMIEQINIALEQKGSGNFSAWVIEACRR
Sbjct: 1   MSTKNRTRRTTTRNIRFPNQMIEQINIALEQKGSGNFSAWVIEACRR 47


>UniRef50_Q7CQS6 Cluster: Pathogenicity island encoded protein:
           SPI5; n=4; Salmonella|Rep: Pathogenicity island encoded
           protein: SPI5 - Salmonella typhimurium
          Length = 56

 Score = 44.8 bits (101), Expect = 0.001
 Identities = 20/33 (60%), Positives = 24/33 (72%)
 Frame = -3

Query: 106 NIRFPNQMIEQINIALEQKGSGNFSAWVIEACR 8
           NIRF   M+EQI  AL+ + + NFSAWV EACR
Sbjct: 14  NIRFSYSMLEQIEFALKSEKTRNFSAWVKEACR 46


>UniRef50_UPI00015C552B Cluster: hypothetical protein CKO_01133;
           n=1; Citrobacter koseri ATCC BAA-895|Rep: hypothetical
           protein CKO_01133 - Citrobacter koseri ATCC BAA-895
          Length = 63

 Score = 43.2 bits (97), Expect = 0.004
 Identities = 20/46 (43%), Positives = 28/46 (60%)
 Frame = -3

Query: 145 MSTKNXXXXXXXRNIRFPNQMIEQINIALEQKGSGNFSAWVIEACR 8
           MS KN       +NIRF   +++QI   + ++ + NFSAWV EACR
Sbjct: 1   MSIKNFTGKTVIKNIRFSYSLLKQIEQVMAKEKTSNFSAWVKEACR 46


>UniRef50_Q8FII1 Cluster: Putative uncharacterized protein; n=1;
          Escherichia coli O6|Rep: Putative uncharacterized
          protein - Escherichia coli O6
          Length = 49

 Score = 38.7 bits (86), Expect = 0.083
 Identities = 16/17 (94%), Positives = 17/17 (100%)
 Frame = +3

Query: 3  IRRQASMTQAEKFPDPF 53
          +RRQASMTQAEKFPDPF
Sbjct: 33 LRRQASMTQAEKFPDPF 49


>UniRef50_A5KA45 Cluster: Putative uncharacterized protein; n=2;
            Plasmodium|Rep: Putative uncharacterized protein -
            Plasmodium vivax
          Length = 4034

 Score = 32.7 bits (71), Expect = 5.4
 Identities = 18/35 (51%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
 Frame = +1

Query: 322  SGDPTGYAE----HGVKWKTSSSQRFGQXGXTLVS 414
            SG  TG AE    HGV WK S SQR+   G T+ S
Sbjct: 3058 SGGVTGQAEEAGHHGVMWKNSLSQRYHNSGSTMHS 3092


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 444,468,073
Number of Sequences: 1657284
Number of extensions: 7260317
Number of successful extensions: 11977
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11976
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 33873797511
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)