Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0584
(797 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0563 - 34738732-34738890,34738965-34739009,34739154-347392... 150 1e-36
07_01_0971 + 8169197-8169311,8170351-8170458,8170533-8170725,817... 146 1e-35
01_06_1654 - 38924090-38924101,38924183-38924215,38924737-389248... 134 6e-32
05_06_0014 + 24854462-24854570,24854958-24855065,24855240-248554... 128 4e-30
04_03_0812 - 19922208-19922357,19922448-19922564,19922681-199227... 73 2e-13
03_06_0382 - 33530943-33530966,33531160-33531360,33535494-33537026 67 1e-11
12_02_0028 - 12437332-12437576,12438436-12438537,12438619-124390... 30 2.5
04_03_0742 + 19200045-19200053,19200158-19200437,19201331-192015... 29 3.2
12_02_1159 + 26585042-26585441,26585520-26585608,26585670-265857... 28 7.5
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 28 7.5
11_06_0387 + 23038490-23038662,23039246-23039303,23039471-230395... 28 7.5
04_03_0904 + 20717005-20718087 28 7.5
01_01_0588 + 4372877-4372949,4374328-4376262,4376940-4377015,437... 28 7.5
09_04_0180 + 15367737-15367755,15368874-15369739 28 9.9
07_03_1437 + 26550104-26550310,26550409-26551170 28 9.9
06_03_0478 - 21259376-21259465,21259862-21259924,21260025-212600... 28 9.9
05_01_0421 + 3308692-3309070,3309199-3309339,3309776-3309897,331... 28 9.9
04_04_0822 + 28352941-28353825,28353863-28354016,28354714-283547... 28 9.9
03_06_0353 - 33317015-33318235,33318567-33318824,33319587-333199... 28 9.9
>03_06_0563 -
34738732-34738890,34738965-34739009,34739154-34739201,
34739291-34739386,34739467-34739534,34739633-34739690,
34739783-34739869,34740004-34740051,34740360-34740416,
34740525-34740783,34740877-34741102,34741168-34741275,
34741885-34741987
Length = 453
Score = 150 bits (364), Expect = 1e-36
Identities = 82/178 (46%), Positives = 109/178 (61%), Gaps = 8/178 (4%)
Frame = +1
Query: 262 FSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGPDICGPGTKK 441
FS++ K LV+QF+VKHEQ +DCGGGY+K+ ++QK GETPY IMFGPDICG TKK
Sbjct: 101 FSSKDKTLVLQFSVKHEQKLDCGGGYVKLLGGDVDQKKFGGETPYSIMFGPDICGYATKK 160
Query: 442 VHVIFSYKGKNHLIKKDIRCK-DVSTHICTL*L*NLTTPMKSSLTMRKLNLAT*RQTGTS 618
VH I + GKNHLIKKD+ CK D TH+ TL + K S+ + T +QTG+
Sbjct: 161 VHAILTKNGKNHLIKKDVPCKTDQLTHVYTL---IIRPDAKYSILIDN----TEKQTGSI 213
Query: 619 F------RLRKSRTLKPRNQKTGMTSPLFPDPEDKKPEXWDK-PEXHPDPDATKPKTW 771
+ + R + + + + PDPEDKKPE +D P+ DP+ATKP+ W
Sbjct: 214 YDDWNIIPPKNKRDPEAKKPEDWDDNEYIPDPEDKKPEGYDDIPKEITDPEATKPEDW 271
Score = 86.2 bits (204), Expect = 3e-17
Identities = 36/78 (46%), Positives = 51/78 (65%)
Frame = +3
Query: 483 QKRYPLQRCVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWDFLPPKKIKDPEAKKPE 662
+K P + TH+YTLI++PD Y +LIDN + ++G + DW+ +PPK +DPEAKKPE
Sbjct: 175 KKDVPCKTDQLTHVYTLIIRPDAKYSILIDNTEKQTGSIYDDWNIIPPKNKRDPEAKKPE 234
Query: 663 DWDDKPTISRPRRQEA*G 716
DWDD I P ++ G
Sbjct: 235 DWDDNEYIPDPEDKKPEG 252
Score = 54.0 bits (124), Expect = 1e-07
Identities = 31/73 (42%), Positives = 42/73 (57%), Gaps = 12/73 (16%)
Frame = +2
Query: 71 DVFFEEKFPDDSWESNWVYSE--HPGKEFGKFKLTAGKFFSDPEDD----------KGLK 214
+VFF+EKF DD WE WV SE G++ T+GK++ D +D G++
Sbjct: 26 EVFFQEKF-DDGWEDRWVKSEWKKDDNRAGEWNHTSGKWYGDADDKGMCEVTLLLCAGIQ 84
Query: 215 TSEDARFYALSRK 253
TSED RFYA+S K
Sbjct: 85 TSEDYRFYAISAK 97
>07_01_0971 +
8169197-8169311,8170351-8170458,8170533-8170725,
8170811-8171069,8171151-8171207,8171433-8171480,
8171571-8171657,8171743-8171800,8171891-8171958,
8172066-8172161,8172244-8172291,8172658-8172696,
8172782-8172868,8173136-8173147
Length = 424
Score = 146 bits (355), Expect = 1e-35
Identities = 82/178 (46%), Positives = 110/178 (61%), Gaps = 8/178 (4%)
Frame = +1
Query: 262 FSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGPDICGPGTKK 441
FSN+ K LV+QF+VKHEQ +DCGGGY+K+ ++QK G+TPY IMFGPDICG TKK
Sbjct: 94 FSNKDKTLVLQFSVKHEQKLDCGGGYVKLLGGDVDQKKFGGDTPYSIMFGPDICGYSTKK 153
Query: 442 VHVIFSYKGKNHLIKKDIRCK-DVSTHICTL*L*NLTTPMKSSLTMRKLNLAT*RQTGTS 618
VH IF+ KNHLIKKD+ C+ D +H+ TL + P ++ T+ N+ +Q+G+
Sbjct: 154 VHTIFTKNDKNHLIKKDVPCETDQLSHVYTL----IIHP-DATYTILIDNVE--KQSGSI 206
Query: 619 FR----LRKSRTLKPRNQK--TGMTSPLFPDPEDKKPEXWDK-PEXHPDPDATKPKTW 771
+ L + P +K PDPEDKKPE +D P+ PDPDA KP+ W
Sbjct: 207 YEHWDILPPKQIKDPEAKKPEDWDDKEYIPDPEDKKPEGYDDIPKEIPDPDAKKPEDW 264
Score = 93.5 bits (222), Expect = 2e-19
Identities = 41/78 (52%), Positives = 53/78 (67%)
Frame = +3
Query: 483 QKRYPLQRCVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWDFLPPKKIKDPEAKKPE 662
+K P + +H+YTLI+ PD TY +LIDN + +SG + WD LPPK+IKDPEAKKPE
Sbjct: 168 KKDVPCETDQLSHVYTLIIHPDATYTILIDNVEKQSGSIYEHWDILPPKQIKDPEAKKPE 227
Query: 663 DWDDKPTISRPRRQEA*G 716
DWDDK I P ++ G
Sbjct: 228 DWDDKEYIPDPEDKKPEG 245
Score = 65.3 bits (152), Expect = 5e-11
Identities = 34/61 (55%), Positives = 44/61 (72%), Gaps = 2/61 (3%)
Frame = +2
Query: 71 DVFFEEKFPDDSWESNWVYSEHPGKE--FGKFKLTAGKFFSDPEDDKGLKTSEDARFYAL 244
+VFF+EKF +D WES WV SE E G++ T+GK+ DPED KG++TSED RFYA+
Sbjct: 30 EVFFQEKF-EDGWESRWVKSEWKKDENMAGEWNHTSGKWNGDPED-KGIQTSEDYRFYAI 87
Query: 245 S 247
S
Sbjct: 88 S 88
Score = 28.7 bits (61), Expect = 5.7
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1
Query: 688 PDPEDKKPEXWDKPE 732
PDP+ KKPE WD E
Sbjct: 254 PDPDAKKPEDWDDEE 268
>01_06_1654 -
38924090-38924101,38924183-38924215,38924737-38924829,
38924909-38924965,38925048-38925143,38925237-38925304,
38925429-38925486,38925572-38925658,38925935-38925982,
38926060-38926116,38926200-38926458,38926666-38926858,
38926991-38927098,38927849-38927957
Length = 425
Score = 134 bits (325), Expect = 6e-32
Identities = 69/175 (39%), Positives = 100/175 (57%), Gaps = 2/175 (1%)
Frame = +1
Query: 253 VKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGPDICGPG 432
+ FSN+G+ LV+Q+++K EQDI+CGGGY+K+ + QK G+TPY +MFGPDICG
Sbjct: 89 IPEFSNKGRTLVLQYSIKFEQDIECGGGYIKLMSGYVNQKKFSGDTPYSLMFGPDICGTQ 148
Query: 433 TKKVHVIFSYKGKNHLIKKDIRCK-DVSTHICTL*L*NLTTPMKSSLTMRKLNLAT*RQT 609
TKK+H+I SY+G+N+ IKKD++C+ D TH+ T L + R+ +
Sbjct: 149 TKKLHLILSYQGQNYPIKKDLQCETDKLTHVYTFIL-RPDASYSILVDNRERESGSMYTD 207
Query: 610 GTSFRLRKSRTLKPRNQKTGMTSPLFPDPEDKKPEXWDK-PEXHPDPDATKPKTW 771
RK + + + K DP+ KPE +D P+ PDP KP TW
Sbjct: 208 WDILPPRKIKDVHAKKPKDWDDREYIEDPDAVKPEGYDSIPKEIPDPKDKKPDTW 262
Score = 87.4 bits (207), Expect = 1e-17
Identities = 34/60 (56%), Positives = 45/60 (75%)
Frame = +3
Query: 516 THLYTLIVKPDNTYEVLIDNEKVESGDLEADWDFLPPKKIKDPEAKKPEDWDDKPTISRP 695
TH+YT I++PD +Y +L+DN + ESG + DWD LPP+KIKD AKKP+DWDD+ I P
Sbjct: 177 THVYTFILRPDASYSILVDNRERESGSMYTDWDILPPRKIKDVHAKKPKDWDDREYIEDP 236
Score = 62.1 bits (144), Expect = 5e-10
Identities = 32/63 (50%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Frame = +2
Query: 71 DVFFEEKFPDDSWESNWVYSEHPGKE--FGKFKLTAGKFFSDPEDDKGLKTSEDARFYAL 244
+V FEE+F +D WES WV S+ E G FK TAG++ DP DDKG++T+ DAR +A+
Sbjct: 28 EVIFEERF-EDGWESRWVKSDWKRSEGKAGTFKHTAGRYSGDP-DDKGIQTTLDARHFAI 85
Query: 245 SRK 253
S K
Sbjct: 86 SAK 88
Score = 32.7 bits (71), Expect = 0.35
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = +3
Query: 570 DNEKVESGDL--EADWDFLPPKKIKDPEAKKPEDWDDKPT-ISRPR 698
D E +E D +D +P K+I DP+ KKP+ WDD I +PR
Sbjct: 229 DREYIEDPDAVKPEGYDSIP-KEIPDPKDKKPDTWDDDDDGIWKPR 273
Score = 29.1 bits (62), Expect = 4.3
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +1
Query: 688 PDPEDKKPEXWD 723
PDP+DKKP+ WD
Sbjct: 252 PDPKDKKPDTWD 263
>05_06_0014 +
24854462-24854570,24854958-24855065,24855240-24855432,
24855892-24856150,24856236-24856292,24856370-24856417,
24856725-24856811,24856885-24856942,24857084-24857151,
24857279-24857374,24857483-24857539,24857906-24857952,
24858184-24858210,24858312-24858504
Length = 468
Score = 128 bits (310), Expect = 4e-30
Identities = 67/172 (38%), Positives = 96/172 (55%), Gaps = 2/172 (1%)
Frame = +1
Query: 262 FSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGPDICGPGTKK 441
FSN+ + LVVQ+++K EQDI+CGG Y+K+ + QK G+TPY MFGPDICG TKK
Sbjct: 92 FSNKNRTLVVQYSIKIEQDIECGGAYIKLMSGYVNQKKFGGDTPYSFMFGPDICGDQTKK 151
Query: 442 VHVIFSYKGKNHLIKKDIRCK-DVSTHICTL*L*NLTTPMKSSLTMRKLNLAT*RQTGTS 618
+H+I SY+G+N+ IKKD++C+ D TH T L + R+ +
Sbjct: 152 LHLILSYQGQNYPIKKDLKCETDKLTHFYTFIL-RPDASYSLLVDNREREFGSMYTDWDI 210
Query: 619 FRLRKSRTLKPRNQKTGMTSPLFPDPEDKKPEXWDK-PEXHPDPDATKPKTW 771
RK + + K DP++ KPE +D P+ PDP KP++W
Sbjct: 211 LPPRKIKESNAKKPKDWDDREYIEDPDEVKPEGYDSIPKEIPDPKDKKPESW 262
Score = 59.3 bits (137), Expect = 4e-09
Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Frame = +2
Query: 62 INCDVFFEEKFPDDSWESNWVYSEHPGKE--FGKFKLTAGKFFSDPEDDKGLKTSEDARF 235
++ +V FEE+F DD W S WV S+ E G FK TAG + DP DD+G++T+ DA+
Sbjct: 25 VSGEVIFEERF-DDDWGSRWVKSDWKKSEGKAGTFKHTAGSYSGDP-DDRGIQTTSDAKH 82
Query: 236 YALSRK 253
+A+S K
Sbjct: 83 FAISAK 88
Score = 33.5 bits (73), Expect = 0.20
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +3
Query: 624 PKKIKDPEAKKPEDWDD 674
PK+I DP+ KKPE WDD
Sbjct: 248 PKEIPDPKDKKPESWDD 264
>04_03_0812 -
19922208-19922357,19922448-19922564,19922681-19922752,
19922864-19923993,19924939-19925008,19925125-19925199
Length = 537
Score = 73.3 bits (172), Expect = 2e-13
Identities = 61/190 (32%), Positives = 88/190 (46%), Gaps = 17/190 (8%)
Frame = +1
Query: 256 KPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVF---DCKLEQKDMHGETPYEIMFGPDICG 426
+P + + +V+QF V+ + ++CGG YLK D + K+ ETPY IMFGPD CG
Sbjct: 81 EPVTLKDGTVVLQFEVRLQNGLECGGAYLKYIRPQDAAWDAKEFDNETPYTIMFGPDKCG 140
Query: 427 PGTKKVHVIFSYK----GK---NHLIKKDIRCKDVSTHICTL*L--*NLTTPMKSSLTMR 579
T KVH I +K GK +HL D +H+ T L N + +
Sbjct: 141 -STNKVHFILKHKNPKTGKYVEHHLKFPPSVPYDKLSHVYTAILKPDNEVRILVDGEEKK 199
Query: 580 KLNLAT*RQTGTSFRLRKSRTLKPRNQKTGM---TSPLFPDPEDKKPEXWDK--PEXHPD 744
K N + S L S+T+ + K PDP+ KP+ WD+ P D
Sbjct: 200 KANFLSADDFEPS--LIPSKTIPDPDDKKPEDWDERAKIPDPDAVKPDDWDEDAPMEIED 257
Query: 745 PDATKPKTWM 774
+ATKP+ W+
Sbjct: 258 EEATKPEGWL 267
Score = 60.9 bits (141), Expect = 1e-09
Identities = 31/65 (47%), Positives = 42/65 (64%), Gaps = 5/65 (7%)
Frame = +3
Query: 516 THLYTLIVKPDNTYEVLIDNE-KVESGDLEADWDF----LPPKKIKDPEAKKPEDWDDKP 680
+H+YT I+KPDN +L+D E K ++ L AD DF +P K I DP+ KKPEDWD++
Sbjct: 176 SHVYTAILKPDNEVRILVDGEEKKKANFLSAD-DFEPSLIPSKTIPDPDDKKPEDWDERA 234
Query: 681 TISRP 695
I P
Sbjct: 235 KIPDP 239
Score = 44.4 bits (100), Expect = 1e-04
Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Frame = +3
Query: 537 VKPDNTYEVLIDNEKVESGDLEADWDFLPPKKIKDPEAKKPEDWDDK-------PTISRP 695
VKPD+ E + E W P++I DPEA KPEDWDD+ P I P
Sbjct: 242 VKPDDWDEDAPMEIEDEEATKPEGWLDDEPEEIDDPEANKPEDWDDEEDGEWEAPKIDNP 301
Query: 696 RRQEA*GXGQ 725
+ +EA G G+
Sbjct: 302 KCEEAPGCGE 311
Score = 35.1 bits (77), Expect = 0.065
Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Frame = +1
Query: 691 DPEDKKPEXW--DKPEXHPDPDATKPKTW 771
D E KPE W D+PE DP+A KP+ W
Sbjct: 257 DEEATKPEGWLDDEPEEIDDPEANKPEDW 285
>03_06_0382 - 33530943-33530966,33531160-33531360,33535494-33537026
Length = 585
Score = 67.3 bits (157), Expect = 1e-11
Identities = 30/58 (51%), Positives = 39/58 (67%)
Frame = +3
Query: 483 QKRYPLQRCVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWDFLPPKKIKDPEAKK 656
+K P + TH+YTLI++PD Y +LIDN + +G + D D LPPKK KDPEAKK
Sbjct: 521 KKDVPCETDQLTHVYTLIIRPDAKYSILIDNTEKRTGSIYGDCDNLPPKKKKDPEAKK 578
Score = 31.9 bits (69), Expect = 0.61
Identities = 14/23 (60%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
Frame = +1
Query: 466 GKNHLIKKDIRCK-DVSTHICTL 531
G NHLIKKD+ C+ D TH+ TL
Sbjct: 515 GNNHLIKKDVPCETDQLTHVYTL 537
>12_02_0028 -
12437332-12437576,12438436-12438537,12438619-12439009,
12439996-12440532
Length = 424
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = -1
Query: 575 IVNEDFIGVVRFHNQSVQMCVDTSLQRISFLMRWF 471
+V EDF+ + F +Q+V +C+D +R L+++F
Sbjct: 353 LVEEDFVQIAEFLHQAVTICLDVQKER-GKLLKYF 386
>04_03_0742 +
19200045-19200053,19200158-19200437,19201331-19201545,
19201705-19201792,19202277-19202842
Length = 385
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +1
Query: 637 RTLKPRNQKTGMTSPLFPDPEDKKPEXWDKPEXHPDPDATK 759
R K +K + SP+ P PE+KK E + P P+ K
Sbjct: 127 RVQKKTGRKVELLSPMPPPPEEKKEEEKKEEPEPPKPEEKK 167
>12_02_1159 +
26585042-26585441,26585520-26585608,26585670-26585720,
26586189-26586282,26586451-26586512,26586589-26586671,
26586793-26586901,26587010-26587051,26587152-26587316,
26588165-26588341,26588820-26588984,26589069-26589332
Length = 566
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 418 ICGPGTKKVHVIFSYKGKNHLIKKDIRCKDV 510
I GPG + I S+ N+LI +D+ KDV
Sbjct: 330 IVGPGDELKEFILSFCTHNYLIVQDVELKDV 360
>11_06_0767 +
27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 28.3 bits (60), Expect = 7.5
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = -1
Query: 419 MSGPNIISYGVSPCMSFCSSLQSKTLRYPPPQSMSCSCLTVNWTTKGL 276
M GP ++ ++P S +Q + +++ +SC+CL T+KGL
Sbjct: 674 MLGPTVLV--LAPTRELASQIQDEAVKFGRSSRVSCTCL-YGGTSKGL 718
>11_06_0387 +
23038490-23038662,23039246-23039303,23039471-23039551,
23039640-23039675,23039821-23040060,23040155-23040293,
23041417-23041889
Length = 399
Score = 28.3 bits (60), Expect = 7.5
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = -1
Query: 395 YGVSPCMSFCSSLQSKTLRYPPPQSMSCSCLTVNWTTKGLPSLLNGLTYGR 243
Y SP + F S L ++ L +P MS ++W T+G+ S L+ L G+
Sbjct: 131 YDSSP-VDFVSDLGTRFLLHPSVLKMSQPPRILSWMTRGIASGLDTLFIGK 180
>04_03_0904 + 20717005-20718087
Length = 360
Score = 28.3 bits (60), Expect = 7.5
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 664 TGMTSPLFPDPEDKKPEXWDKPEXHPDPDATKP 762
T +P+ P P+ +KP KP H +P KP
Sbjct: 32 TPTPTPVKPAPKPEKPPKEHKPPHHHEPKPEKP 64
>01_01_0588 +
4372877-4372949,4374328-4376262,4376940-4377015,
4378900-4378970,4379038-4379144,4379241-4379711,
4379791-4379976,4380132-4380425,4380820-4381434,
4382219-4382615,4382768-4382850,4383397-4383567,
4384046-4384243,4384754-4385314,4385401-4385460,
4385553-4385869,4385980-4386403,4386539-4387006,
4387093-4387209,4387306-4387427,4387506-4388247,
4388453-4388485,4388625-4388879,4388975-4389160,
4390115-4390453,4391293-4392045
Length = 3017
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 564 LIDNEKVESGDLEADWDFLPPKKIKDPE 647
L DN K+++GDL +W P + PE
Sbjct: 107 LTDNSKLDTGDLHGEWKEWRPTQCSVPE 134
>09_04_0180 + 15367737-15367755,15368874-15369739
Length = 294
Score = 27.9 bits (59), Expect = 9.9
Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = +1
Query: 688 PDPE-DKKPEXWDKPEXHPDPDATKP 762
PDPE + +PE PE P+P KP
Sbjct: 159 PDPELEPEPEPEPDPEPEPEPPTPKP 184
>07_03_1437 + 26550104-26550310,26550409-26551170
Length = 322
Score = 27.9 bits (59), Expect = 9.9
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Frame = -1
Query: 362 SLQSKTLRYPPPQSMSCSCLTVNWTTKGLPS----LLNGL-TYGREHRTSHLQRFS 210
SL ++TL + PP + + L ++ KGL + L+G T GR H +S R S
Sbjct: 154 SLANETLAFLPPPVFNLTQLVASFQAKGLDADDMVTLSGAHTIGRSHCSSFADRLS 209
>06_03_0478 - 21259376-21259465,21259862-21259924,21260025-21260066,
21260180-21260461,21261084-21261587,21261973-21261981,
21262122-21262196,21262375-21262449,21262557-21263494,
21263577-21263607,21263694-21263979,21264691-21264905,
21265329-21265437,21265556-21265611,21265730-21265822,
21266348-21266393,21266496-21267221,21267489-21267550,
21267738-21268013,21268604-21268735,21268835-21268909
Length = 1394
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +1
Query: 601 RQTGTSFRLRKSRTLKPRNQKTGMTSPLFPDPEDKKPEXWDKPEXHP 741
+Q G + + + + K R+QKT D ++KK D+P HP
Sbjct: 958 KQDGKNDKAKDDKEKKSRDQKTDSKQKSLTDTKEKKKS--DEPPKHP 1002
>05_01_0421 +
3308692-3309070,3309199-3309339,3309776-3309897,
3310369-3310632,3310719-3310849,3311254-3311461,
3311564-3311632,3311722-3311799,3312448-3312621
Length = 521
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = -3
Query: 105 ESSGNFSSKNTSQFIEDNASKLTTTSTTA 19
ES+G SSK + E++ + TTTSTTA
Sbjct: 59 ESAGVSSSKKKRRIEEESPAATTTTSTTA 87
>04_04_0822 +
28352941-28353825,28353863-28354016,28354714-28354754,
28355060-28355310,28355411-28355591,28356138-28356323,
28356396-28356569,28356992-28357150,28357424-28357501,
28357612-28357748,28357980-28358044,28358115-28358148,
28358216-28358372,28359135-28359196,28360041-28360118,
28360940-28361042
Length = 914
Score = 27.9 bits (59), Expect = 9.9
Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Frame = +1
Query: 619 FRLRKSRTLKPRNQKTGMTSPLFPD--PEDKKPEXWDKPEXHPDPDATKPK 765
F + SRT +PR + D ED E D HPDP T+P+
Sbjct: 140 FDIPSSRTSRPRRTAGRRLATAVADLSEEDDDLELADDDFDHPDPRPTRPR 190
>03_06_0353 -
33317015-33318235,33318567-33318824,33319587-33319904,
33319949-33320011,33320103-33320496,33320684-33320796,
33320932-33321639,33321667-33323199,33323395-33323607,
33323718-33324700,33324890-33325423,33325694-33325820,
33326083-33326162,33327347-33327377,33327949-33328053,
33328119-33328124,33328349-33328985,33329144-33329478,
33330394-33331113
Length = 2792
Score = 27.9 bits (59), Expect = 9.9
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = +1
Query: 646 KPRNQKTGMTSPLFPDPEDKKPEXWDKPEXHPDPDATKPK 765
+P T +P P P+ KK + P+ HP P P+
Sbjct: 124 RPVAPATAAAAPGQPQPKKKKKQKEPAPQAHPPPPLPPPQ 163
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,699,762
Number of Sequences: 37544
Number of extensions: 512820
Number of successful extensions: 1627
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1426
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1598
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2162420256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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