Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0583
(858 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC091125-8|AAP46267.1| 353|Caenorhabditis elegans Hypothetical ... 64 9e-11
AC091125-7|AAK27890.1| 510|Caenorhabditis elegans Hypothetical ... 64 9e-11
Z99281-33|CAJ44242.1| 459|Caenorhabditis elegans Hypothetical p... 44 2e-04
Z99281-32|CAB16511.1| 444|Caenorhabditis elegans Hypothetical p... 44 2e-04
U00002-1|AAA17051.1| 444|Caenorhabditis elegans rabGDI protein. 44 2e-04
Z66512-1|CAA91322.1| 638|Caenorhabditis elegans Hypothetical pr... 34 0.15
U23529-6|AAL32208.1| 384|Caenorhabditis elegans Hypothetical pr... 31 1.4
AC024843-3|AAF60838.1| 110|Caenorhabditis elegans Hypothetical ... 31 1.4
U80451-1|AAB37835.1| 591|Caenorhabditis elegans Dnaj domain (pr... 30 1.8
AL032655-1|CAA21726.1| 995|Caenorhabditis elegans Hypothetical ... 30 2.4
U39652-1|AAA80403.2| 552|Caenorhabditis elegans Abnormal cell m... 29 3.2
AF014939-7|AAB63929.2| 343|Caenorhabditis elegans Serpentine re... 29 3.2
AB126261-1|BAD02168.1| 552|Caenorhabditis elegans MIG-23 protein. 29 3.2
Z49128-8|CAA88960.2| 989|Caenorhabditis elegans Hypothetical pr... 29 5.6
AL021171-6|CAA15960.2| 989|Caenorhabditis elegans Hypothetical ... 29 5.6
Z77134-6|CAB00872.2| 135|Caenorhabditis elegans Hypothetical pr... 28 7.4
>AC091125-8|AAP46267.1| 353|Caenorhabditis elegans Hypothetical
protein Y67D2.1b protein.
Length = 353
Score = 64.5 bits (150), Expect = 9e-11
Identities = 25/50 (50%), Positives = 39/50 (78%)
Frame = +3
Query: 87 MDEDFPTDFQVIVVGTGMVESIVAAACSRIGKNVLHMDSSDHYGGLWASY 236
MDE P V+V+GTG+ E+I+A+AC+R G +VLH+D +++YGG W+S+
Sbjct: 1 MDEKLPESVDVVVLGTGLPEAILASACARAGLSVLHLDRNEYYGGDWSSF 50
Score = 41.5 bits (93), Expect = 7e-04
Identities = 17/39 (43%), Positives = 27/39 (69%)
Frame = +1
Query: 556 LMPVPCSRADVFATEAVGIVEKRMLMKXLTSIVGYSEEE 672
L PVPCS+ ++F + A+ I+EKR LMK +T +S ++
Sbjct: 173 LNPVPCSKGEIFQSNALSILEKRALMKFITFCTQWSTKD 211
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/47 (34%), Positives = 30/47 (63%)
Frame = +2
Query: 368 KGEPRKVWSQADFAAEYXKFNIDTTPKLLFSRGPLVELLISSNIARY 508
K E + + +Q + A++ +F+ID PK+L S+G +V+ L S ++ Y
Sbjct: 105 KDEEKPMKTQLEEASQMRRFSIDLVPKILLSKGAMVQTLCDSQVSHY 151
>AC091125-7|AAK27890.1| 510|Caenorhabditis elegans Hypothetical
protein Y67D2.1a protein.
Length = 510
Score = 64.5 bits (150), Expect = 9e-11
Identities = 25/50 (50%), Positives = 39/50 (78%)
Frame = +3
Query: 87 MDEDFPTDFQVIVVGTGMVESIVAAACSRIGKNVLHMDSSDHYGGLWASY 236
MDE P V+V+GTG+ E+I+A+AC+R G +VLH+D +++YGG W+S+
Sbjct: 1 MDEKLPESVDVVVLGTGLPEAILASACARAGLSVLHLDRNEYYGGDWSSF 50
Score = 41.5 bits (93), Expect = 7e-04
Identities = 17/39 (43%), Positives = 27/39 (69%)
Frame = +1
Query: 556 LMPVPCSRADVFATEAVGIVEKRMLMKXLTSIVGYSEEE 672
L PVPCS+ ++F + A+ I+EKR LMK +T +S ++
Sbjct: 173 LNPVPCSKGEIFQSNALSILEKRALMKFITFCTQWSTKD 211
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/47 (34%), Positives = 30/47 (63%)
Frame = +2
Query: 368 KGEPRKVWSQADFAAEYXKFNIDTTPKLLFSRGPLVELLISSNIARY 508
K E + + +Q + A++ +F+ID PK+L S+G +V+ L S ++ Y
Sbjct: 105 KDEEKPMKTQLEEASQMRRFSIDLVPKILLSKGAMVQTLCDSQVSHY 151
>Z99281-33|CAJ44242.1| 459|Caenorhabditis elegans Hypothetical
protein Y57G11C.10b protein.
Length = 459
Score = 43.6 bits (98), Expect = 2e-04
Identities = 19/42 (45%), Positives = 29/42 (69%)
Frame = +3
Query: 108 DFQVIVVGTGMVESIVAAACSRIGKNVLHMDSSDHYGGLWAS 233
++ IV+GTG+ E I++ S GK VLH+D +++YGG AS
Sbjct: 4 EYDAIVLGTGLKECIISGMLSVSGKKVLHIDRNNYYGGESAS 45
Score = 37.9 bits (84), Expect = 0.009
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +2
Query: 425 FNIDTTPKLLFSRGPLVELLISSNIARYL 511
+N+D PK L + GPLV+LLI + + RYL
Sbjct: 73 WNVDLIPKFLMANGPLVKLLIHTGVTRYL 101
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/54 (24%), Positives = 23/54 (42%)
Frame = +1
Query: 511 EFRCVTRVLTWLNDQLMPVPCSRADVFATEAVGIVEKRMLMKXLTSIVGYSEEE 672
EF+ + ++ VP + AT +G+ EKR K L + + E +
Sbjct: 102 EFKSIEASFVVKGGKIYKVPADEMEALATSLMGMFEKRRFKKFLVWVQQFDENK 155
>Z99281-32|CAB16511.1| 444|Caenorhabditis elegans Hypothetical
protein Y57G11C.10a protein.
Length = 444
Score = 43.6 bits (98), Expect = 2e-04
Identities = 19/42 (45%), Positives = 29/42 (69%)
Frame = +3
Query: 108 DFQVIVVGTGMVESIVAAACSRIGKNVLHMDSSDHYGGLWAS 233
++ IV+GTG+ E I++ S GK VLH+D +++YGG AS
Sbjct: 4 EYDAIVLGTGLKECIISGMLSVSGKKVLHIDRNNYYGGESAS 45
Score = 37.9 bits (84), Expect = 0.009
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +2
Query: 425 FNIDTTPKLLFSRGPLVELLISSNIARYL 511
+N+D PK L + GPLV+LLI + + RYL
Sbjct: 73 WNVDLIPKFLMANGPLVKLLIHTGVTRYL 101
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/54 (24%), Positives = 23/54 (42%)
Frame = +1
Query: 511 EFRCVTRVLTWLNDQLMPVPCSRADVFATEAVGIVEKRMLMKXLTSIVGYSEEE 672
EF+ + ++ VP + AT +G+ EKR K L + + E +
Sbjct: 102 EFKSIEASFVVKGGKIYKVPADEMEALATSLMGMFEKRRFKKFLVWVQQFDENK 155
>U00002-1|AAA17051.1| 444|Caenorhabditis elegans rabGDI protein.
Length = 444
Score = 43.6 bits (98), Expect = 2e-04
Identities = 19/42 (45%), Positives = 29/42 (69%)
Frame = +3
Query: 108 DFQVIVVGTGMVESIVAAACSRIGKNVLHMDSSDHYGGLWAS 233
++ IV+GTG+ E I++ S GK VLH+D +++YGG AS
Sbjct: 4 EYDAIVLGTGLKECIISGMLSVSGKKVLHIDRNNYYGGESAS 45
Score = 37.9 bits (84), Expect = 0.009
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +2
Query: 425 FNIDTTPKLLFSRGPLVELLISSNIARYL 511
+N+D PK L + GPLV+LLI + + RYL
Sbjct: 73 WNVDLIPKFLMANGPLVKLLIHTGVTRYL 101
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/54 (24%), Positives = 23/54 (42%)
Frame = +1
Query: 511 EFRCVTRVLTWLNDQLMPVPCSRADVFATEAVGIVEKRMLMKXLTSIVGYSEEE 672
EF+ + ++ VP + AT +G+ EKR K L + + E +
Sbjct: 102 EFKSIEASFVVKGGKIYKVPADEMEALATSLMGMFEKRRFKKFLVWVQQFDENK 155
>Z66512-1|CAA91322.1| 638|Caenorhabditis elegans Hypothetical
protein F52H3.2 protein.
Length = 638
Score = 33.9 bits (74), Expect = 0.15
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +3
Query: 78 TRMMDEDFPTDFQVIVVGTGMVESIVAAACSRIGKN-VLHMDSSDHYGGLWASYNFEGL 251
TR++ F TD VIV+G G AAA +R G N VL + + G + + +F G+
Sbjct: 6 TRLLRRCFQTDVDVIVIGGGHAGCESAAAAARCGSNTVLVTQNKNTIGEMSCNPSFGGI 64
>U23529-6|AAL32208.1| 384|Caenorhabditis elegans Hypothetical
protein C15B12.1 protein.
Length = 384
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 105 TDFQVIVVGTGMVESIVAAACSRIGKNVLHMD 200
TD+ V+VVG G+ S A C +IG L ++
Sbjct: 3 TDYDVVVVGAGIFGSCTAYNCQKIGLKTLLLE 34
>AC024843-3|AAF60838.1| 110|Caenorhabditis elegans Hypothetical
protein Y61A9LA.7 protein.
Length = 110
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/59 (25%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +2
Query: 254 EFIKEVNSDPDRQKQVYNLSEKWFIEKESAQGETTDENKGEPRKVWSQAD-FAAEYXKF 427
E++ ++ S PDR +++ +++ ++ + + +K EP+KV+ D F ++Y KF
Sbjct: 39 EYLAQILS-PDRLQELKTAHDEFEAQRRGKRAAISASDKPEPKKVFDIIDQFTSDYQKF 96
>U80451-1|AAB37835.1| 591|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 9 protein.
Length = 591
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -1
Query: 648 RCQXFHEHPFLDDTDRFGGEYVGSGARNRHQLIVEPGQDA 529
RC FH F+D+ ++ E V R H+++++P Q A
Sbjct: 49 RCLMFHPDRFVDNDEKKDAERVFVKLRRAHEVLLDPKQRA 88
>AL032655-1|CAA21726.1| 995|Caenorhabditis elegans Hypothetical
protein Y6B3B.3 protein.
Length = 995
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = +1
Query: 442 SKAVVLSRAPCRASDLFEHRALPEFRCVTRVLTWLNDQLMPVPCSRADVFATEAVGIV 615
++++V+ P DL R+ E RCV +L +N +PV R T+ G +
Sbjct: 309 NRSIVIHNVPEWTDDLQHDRSEHEVRCVNMLLRHMNVCALPVAAYRLGKMRTDGRGSI 366
>U39652-1|AAA80403.2| 552|Caenorhabditis elegans Abnormal cell
migration protein 23 protein.
Length = 552
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = -1
Query: 417 YSAAKSAWLHTFLGSPLFSSVVSPCADSFSINHFSDKLYTCFCLSGSLFT 268
+S+++S W F S +F V CA S+ F DK + F +S S ++
Sbjct: 485 HSSSESLWAPLFFLSAVFCLFVLVCAKEQSVLCFDDKRRSSFGMSRSQYS 534
>AF014939-7|AAB63929.2| 343|Caenorhabditis elegans Serpentine
receptor, class h protein192 protein.
Length = 343
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -3
Query: 358 SCFALCRFLFNKPFFR*VVHLFLSIRITVHFFYELC 251
SC A + N FF +H+ I I +HFF C
Sbjct: 4 SCIAKANYFDNPEFFLLCMHIVTVISIPIHFFGMYC 39
>AB126261-1|BAD02168.1| 552|Caenorhabditis elegans MIG-23 protein.
Length = 552
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = -1
Query: 417 YSAAKSAWLHTFLGSPLFSSVVSPCADSFSINHFSDKLYTCFCLSGSLFT 268
+S+++S W F S +F V CA S+ F DK + F +S S ++
Sbjct: 485 HSSSESLWAPLFFLSAVFCLFVLVCAKEQSVLCFDDKRRSSFGMSRSQYS 534
>Z49128-8|CAA88960.2| 989|Caenorhabditis elegans Hypothetical
protein M03C11.8 protein.
Length = 989
Score = 28.7 bits (61), Expect = 5.6
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = +1
Query: 481 SDLFEHRALPEFRCVTRVLTWLNDQ--LMPVPCSRADVFATEAVGIVEKRMLMKXLTSIV 654
SD+ H+ FRC ++ L LN+Q L C + DV E +K ++ TS++
Sbjct: 725 SDIKIHQLCERFRCTSKFL--LNEQLALKSGKCEQLDVMLPEIQKKGDKVLIFSQFTSML 782
Query: 655 GYSEEEMN 678
E +N
Sbjct: 783 DILEVYLN 790
>AL021171-6|CAA15960.2| 989|Caenorhabditis elegans Hypothetical
protein M03C11.8 protein.
Length = 989
Score = 28.7 bits (61), Expect = 5.6
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = +1
Query: 481 SDLFEHRALPEFRCVTRVLTWLNDQ--LMPVPCSRADVFATEAVGIVEKRMLMKXLTSIV 654
SD+ H+ FRC ++ L LN+Q L C + DV E +K ++ TS++
Sbjct: 725 SDIKIHQLCERFRCTSKFL--LNEQLALKSGKCEQLDVMLPEIQKKGDKVLIFSQFTSML 782
Query: 655 GYSEEEMN 678
E +N
Sbjct: 783 DILEVYLN 790
>Z77134-6|CAB00872.2| 135|Caenorhabditis elegans Hypothetical
protein R09H10.3a protein.
Length = 135
Score = 28.3 bits (60), Expect = 7.4
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = -1
Query: 312 DKLYTCFCLSGSLFTSFMNSVGPQNYMKPRVLHNDH*SPCGGHSCLSYCKQQPLWTR 142
+K F L+ +L T ++V P + VL SP GG L+Y +Q WT+
Sbjct: 2 NKFSLFFALTATLMTITESAV-PTASISAHVLDISGGSPAGGVQILAYIQQNDDWTK 57
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,024,512
Number of Sequences: 27780
Number of extensions: 374550
Number of successful extensions: 1208
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1207
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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