Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0582
         (791 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    24   1.6  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    23   3.7  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    23   3.7  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    22   6.5  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   6.5  

>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +2

Query: 206 TSKEGSRRANYPLPAREVVTKNNDTGL 286
           T     + A+YP P  E+V + ND  +
Sbjct: 250 TPARNPKEADYPSPLYELVDRRNDENI 276


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +2

Query: 206 TSKEGSRRANYPLPAREVVTKNND 277
           T K   + A+YP P  E++ +  D
Sbjct: 242 TPKRNPKEADYPAPLYELIDRKYD 265


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -3

Query: 693 VAPGGYSSTLC 661
           ++PGGYS +LC
Sbjct: 124 LSPGGYSGSLC 134


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 9/20 (45%), Positives = 9/20 (45%)
 Frame = -3

Query: 600 LDVXPPAQQTRHGGHGPIGP 541
           LDV PP     HG   P  P
Sbjct: 20  LDVIPPHYNIHHGATPPQSP 39


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -3

Query: 102 RHLKDASPVLDHAICKSYPDSSKLTTSDARP 10
           RH+K A PV+  + C     S++L      P
Sbjct: 68  RHIKGAIPVVSLSTCSMLCGSTQLWPQPTGP 98


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,437
Number of Sequences: 336
Number of extensions: 3373
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21480183
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)