Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0582
         (791 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC114522-1|AAI14523.1|  829|Homo sapiens SIDT2 protein protein.        55   3e-07
AY358442-1|AAQ88807.1|  832|Homo sapiens multi-transmembrane dom...    55   3e-07
AF151799-1|AAD34036.1|  845|Homo sapiens CGI-40 protein protein.       55   3e-07
BC117222-1|AAI17223.1|  832|Homo sapiens SIDT1 protein protein.        50   1e-05
AK000181-1|BAA90994.1|  827|Homo sapiens protein ( Homo sapiens ...    50   1e-05
AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related ...    35   0.39 

>BC114522-1|AAI14523.1|  829|Homo sapiens SIDT2 protein protein.
          Length = 829

 Score = 55.2 bits (127), Expect = 3e-07
 Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
 Frame = +1

Query: 316 ENVIVMIXSDDEL-CAVVSIQXFSCPVFDNERXILYDGYYLTMTRRGGITLTQDTFPIGL 492
           ++VIV + S+    C+V+SIQ   CPV+D +  + + G Y TMT++  IT+ +  FP   
Sbjct: 183 DSVIVKVTSNKAFPCSVISIQDVLCPVYDLDNNVAFIGMYQTMTKKAAITVQRKDFPSNS 242

Query: 493 LH-SVHIKTSDEDC 531
            +  V +KT D+ C
Sbjct: 243 FYVVVVVKTEDQAC 256


>AY358442-1|AAQ88807.1|  832|Homo sapiens multi-transmembrane domain
           immunoglobulin-like protein protein.
          Length = 832

 Score = 55.2 bits (127), Expect = 3e-07
 Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
 Frame = +1

Query: 316 ENVIVMIXSDDEL-CAVVSIQXFSCPVFDNERXILYDGYYLTMTRRGGITLTQDTFPIGL 492
           ++VIV + S+    C+V+SIQ   CPV+D +  + + G Y TMT++  IT+ +  FP   
Sbjct: 183 DSVIVKVTSNKAFPCSVISIQDVLCPVYDLDNNVAFIGMYQTMTKKAAITVQRKDFPSNS 242

Query: 493 LH-SVHIKTSDEDC 531
            +  V +KT D+ C
Sbjct: 243 FYVVVVVKTEDQAC 256


>AF151799-1|AAD34036.1|  845|Homo sapiens CGI-40 protein protein.
          Length = 845

 Score = 55.2 bits (127), Expect = 3e-07
 Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
 Frame = +1

Query: 316 ENVIVMIXSDDEL-CAVVSIQXFSCPVFDNERXILYDGYYLTMTRRGGITLTQDTFPIGL 492
           ++VIV + S+    C+V+SIQ   CPV+D +  + + G Y TMT++  IT+ +  FP   
Sbjct: 183 DSVIVKVTSNKAFPCSVISIQDVLCPVYDLDNNVAFIGMYQTMTKKAAITVQRKDFPSNS 242

Query: 493 LH-SVHIKTSDEDC 531
            +  V +KT D+ C
Sbjct: 243 FYVVVVVKTEDQAC 256


>BC117222-1|AAI17223.1|  832|Homo sapiens SIDT1 protein protein.
          Length = 832

 Score = 49.6 bits (113), Expect = 1e-05
 Identities = 21/57 (36%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
 Frame = +1

Query: 316 ENVIVMIXSDDEL-CAVVSIQXFSCPVFDNERXILYDGYYLTMTRRGGITLTQDTFP 483
           ++VI+ + S+    C+VVS+Q   CPV+D +  + ++G Y +MT++  ITL +  FP
Sbjct: 198 DSVIIKVVSEMAYPCSVVSVQNIMCPVYDLDHNVEFNGVYQSMTKKAAITLQKKDFP 254


>AK000181-1|BAA90994.1|  827|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20174 fis, clone COL09863. ).
          Length = 827

 Score = 49.6 bits (113), Expect = 1e-05
 Identities = 21/57 (36%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
 Frame = +1

Query: 316 ENVIVMIXSDDEL-CAVVSIQXFSCPVFDNERXILYDGYYLTMTRRGGITLTQDTFP 483
           ++VI+ + S+    C+VVS+Q   CPV+D +  + ++G Y +MT++  ITL +  FP
Sbjct: 198 DSVIIKVVSEMAYPCSVVSVQNIMCPVYDLDHNVEFNGVYQSMTKKAAITLQKKDFP 254


>AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related tumor
            marker CA125 protein.
          Length = 22152

 Score = 34.7 bits (76), Expect = 0.39
 Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 6/89 (6%)
 Frame = -3

Query: 378  VLYGDDSAKLVVGXDHDY--DVLXSGELTRPR-KSPVSLFFVTT---SRAGSG*FARLLP 217
            +L  D S  L  G  H          E+T  R ++P  + ++TT       SG F+ + P
Sbjct: 5581 ILPWDTSTTLFQGGTHSTVSQGFPHSEITTLRSRTPGDVSWMTTPPVEETSSG-FSLMSP 5639

Query: 216  SLDVVAVSQAPSPESNPDSPLPVTTMVVA 130
            S+   +   + SPES P SPLPVT ++ +
Sbjct: 5640 SMTSPSPVSSTSPESIPSSPLPVTALLTS 5668


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,618,357
Number of Sequences: 237096
Number of extensions: 2333532
Number of successful extensions: 6315
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5959
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6314
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9701808132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)