Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0582
(791 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40951-4|AAG01568.1| 756|Caenorhabditis elegans Temporarily ass... 38 0.006
Z77133-7|CAB00865.2| 735|Caenorhabditis elegans Hypothetical pr... 32 0.54
AL008868-4|CAO82021.1| 735|Caenorhabditis elegans Hypothetical ... 32 0.54
AF026204-5|AAB71249.1| 239|Caenorhabditis elegans Hypothetical ... 31 0.71
AF067616-11|AAC19194.2| 627|Caenorhabditis elegans Collagen pro... 31 0.94
AF099925-14|AAX55690.1| 679|Caenorhabditis elegans Calcium bind... 29 3.8
Z48585-10|CAJ43439.1| 338|Caenorhabditis elegans Hypothetical p... 29 5.0
Z48585-9|CAD59166.1| 347|Caenorhabditis elegans Hypothetical pr... 29 5.0
AL032631-9|CAA21575.2| 893|Caenorhabditis elegans Hypothetical ... 28 6.7
>U40951-4|AAG01568.1| 756|Caenorhabditis elegans Temporarily
assigned gene nameprotein 130 protein.
Length = 756
Score = 38.3 bits (85), Expect = 0.006
Identities = 22/74 (29%), Positives = 36/74 (48%)
Frame = +1
Query: 316 ENVIVMIXSDDELCAVVSIQXFSCPVFDNERXILYDGYYLTMTRRGGITLTQDTFPIGLL 495
++V V + S+ +C VS+Q CPVFD + G + TMT I + + +
Sbjct: 165 DSVAVHLDSNSTICMTVSVQKIGCPVFDLPDNVNSMGLHQTMTTSATIPVEKSRMSSFYV 224
Query: 496 HSVHIKTSDEDCXE 537
V + T+D+ C E
Sbjct: 225 VFV-VNTNDDLCSE 237
>Z77133-7|CAB00865.2| 735|Caenorhabditis elegans Hypothetical
protein K03A11.1 protein.
Length = 735
Score = 31.9 bits (69), Expect = 0.54
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 451 GGITLTQDTFPIGLLHS-VHIKTSDEDCXEPGTNGSVPAVARLLGWGXNIQVSST 612
G + LT I +H+ VHI T E+ E N + A+A L+ N+Q+ S+
Sbjct: 117 GALALTGQNMNISNVHNGVHISTPTENLAENNANNGLDAIADLVKPYQNVQLESS 171
>AL008868-4|CAO82021.1| 735|Caenorhabditis elegans Hypothetical
protein K03A11.1 protein.
Length = 735
Score = 31.9 bits (69), Expect = 0.54
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 451 GGITLTQDTFPIGLLHS-VHIKTSDEDCXEPGTNGSVPAVARLLGWGXNIQVSST 612
G + LT I +H+ VHI T E+ E N + A+A L+ N+Q+ S+
Sbjct: 117 GALALTGQNMNISNVHNGVHISTPTENLAENNANNGLDAIADLVKPYQNVQLESS 171
>AF026204-5|AAB71249.1| 239|Caenorhabditis elegans Hypothetical
protein C30E1.4 protein.
Length = 239
Score = 31.5 bits (68), Expect = 0.71
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Frame = +1
Query: 316 ENVIVMIXSDDELCAVVSIQXFSCPVFDNERXI-LYDGYYL-TMTRRGGITLTQDTFPIG 489
+ V + + S+ E+C + + CP+F+ + L D ++ T T+ G ++ ++ IG
Sbjct: 157 DKVNIRVTSETEICGKIVTRQVKCPLFEASGLVELSDAHFFQTFTKFAGFSIRKNY--IG 214
Query: 490 -LLHSVHIKTSDED-CXEPGTN 549
H I DE C +P +N
Sbjct: 215 RQFHIAFIVNPDETLCGKPSSN 236
>AF067616-11|AAC19194.2| 627|Caenorhabditis elegans Collagen
protein 99 protein.
Length = 627
Score = 31.1 bits (67), Expect = 0.94
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Frame = -3
Query: 717 RRRXRIATVAPGG-YSSTLCTISSPDLEPKILXPT--LRATDLDVXPPAQQTRHGGHGPI 547
R R I+ VAP G + L + +L P ++ LR ++ PP G HGP+
Sbjct: 374 RGRHGISLVAPNGTINEDLKKLLKTELMPLLIEDISELRGKNVIPGPPGPPGPRGHHGPV 433
Query: 546 GP 541
GP
Sbjct: 434 GP 435
>AF099925-14|AAX55690.1| 679|Caenorhabditis elegans Calcium binding
protein homologprotein 1, isoform d protein.
Length = 679
Score = 29.1 bits (62), Expect = 3.8
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = -3
Query: 222 LPSLDVVAVSQAPSPESNPDSPLPVTTMVVAETTI-ES**GRHLKDASPVLDHAICKSYP 46
+P+ V+ ++ PS +S + VTT V+ TTI S + V A + P
Sbjct: 559 VPTTTVIQTTETPSTKSKTTKKVKVTTTTVSTTTITTSTPPSTTSPTTTVTPVATSSATP 618
Query: 45 DSSKLTTSDARPSVA 1
SK TT+ RP A
Sbjct: 619 KPSKRTTT-RRPMTA 632
>Z48585-10|CAJ43439.1| 338|Caenorhabditis elegans Hypothetical
protein ZK673.11b protein.
Length = 338
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Frame = -3
Query: 696 TVAPGGY----SSTLCTISSPDLEPKILXPTLRATDLDVXPPAQQTRHG 562
++A G Y SS+ T S D ++L P L ++ D PP ++ HG
Sbjct: 48 SIASGNYKNYGSSSPSTSSGSDSRIQLLPPILSSSSSDSPPPPRRPNHG 96
>Z48585-9|CAD59166.1| 347|Caenorhabditis elegans Hypothetical
protein ZK673.11a protein.
Length = 347
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Frame = -3
Query: 696 TVAPGGY----SSTLCTISSPDLEPKILXPTLRATDLDVXPPAQQTRHG 562
++A G Y SS+ T S D ++L P L ++ D PP ++ HG
Sbjct: 48 SIASGNYKNYGSSSPSTSSGSDSRIQLLPPILSSSSSDSPPPPRRPNHG 96
>AL032631-9|CAA21575.2| 893|Caenorhabditis elegans Hypothetical
protein Y106G6H.7 protein.
Length = 893
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +2
Query: 194 ETATTSKEGSRRANYPLPAREVVTKNNDTGLLRGLVSS 307
E T +RR + PLPA + +N+TGLL ++ S
Sbjct: 3 ENGATPVAAARR-HRPLPAERATSNSNETGLLINVIRS 39
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,771,763
Number of Sequences: 27780
Number of extensions: 339912
Number of successful extensions: 908
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 814
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 908
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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