Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0580
         (300 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   2.2  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    20   5.0  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    20   5.0  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    19   8.7  

>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 2.2
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -3

Query: 268 ELFLPHNSRGSGLXVLGRESVCGDVEVSXLSCSD 167
           +LFL    RG     + +  VCG+  V+ L+  D
Sbjct: 54  QLFLAERERGLKYYPIYKLDVCGNGGVNLLNPED 87


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 20.2 bits (40), Expect = 5.0
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +2

Query: 26  SLAVMENETHSLESIINNNLTGRDLEEFNRI 118
           SLA++   T  + ++    L GR +EE N+I
Sbjct: 227 SLALLMQLTQLVPALFVIYLCGRVMEEQNKI 257


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 20.2 bits (40), Expect = 5.0
 Identities = 5/19 (26%), Positives = 13/19 (68%)
 Frame = -1

Query: 111 LNSSKSRPVKLLFIIDSRL 55
           +N+   +P+++LF + S +
Sbjct: 307 INAESRKPIRILFDVSSEI 325


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 19.4 bits (38), Expect = 8.7
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = -3

Query: 268 ELFLPHNSRGSGLXVLGRESVCGDVEVSXLSCSD 167
           ++FL    RG     + +  VCG   V+ L+  D
Sbjct: 54  QMFLADRERGLKYYPIYKLDVCGTGGVNLLNPED 87


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,543
Number of Sequences: 336
Number of extensions: 643
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used:  5429307
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)