Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0579
         (801 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   5.0  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   8.7  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   8.7  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 6/44 (13%)
 Frame = +3

Query: 108 GKRYTVQKIEASESKYF------INFRTITFFKNDVHTPNKT*P 221
           G+ YTVQ +  SES  F      +NFRT +  +   HT  K  P
Sbjct: 226 GENYTVQIMAKSESSPFESLKKSLNFRTPSCLET-FHTLEKCRP 268


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 153 YFINFRTITFFKND 194
           YF NF TI F ++D
Sbjct: 67  YFFNFWTILFSRSD 80


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 294 VHLEWY*F*FIYFILNL 244
           + LEW  F F+Y + N+
Sbjct: 59  IRLEWKSFRFVYAVYNI 75


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,196
Number of Sequences: 336
Number of extensions: 2969
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21791490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)