Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0579
         (801 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g18310.2 68418.m02155 expressed protein predicted proteins, D...    28   8.3  
At5g18310.1 68418.m02154 expressed protein predicted proteins, D...    28   8.3  

>At5g18310.2 68418.m02155 expressed protein predicted proteins,
           Drosophila melanogaster
          Length = 167

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +3

Query: 105 KGKRYTVQKIEASESKYFINFRTITFFKNDV 197
           +G +  V+ + A   KY+I+   +  FKNDV
Sbjct: 96  RGPQRRVRDVSAQSDKYYIDVNGVKQFKNDV 126


>At5g18310.1 68418.m02154 expressed protein predicted proteins,
           Drosophila melanogaster
          Length = 139

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +3

Query: 105 KGKRYTVQKIEASESKYFINFRTITFFKNDV 197
           +G +  V+ + A   KY+I+   +  FKNDV
Sbjct: 68  RGPQRRVRDVSAQSDKYYIDVNGVKQFKNDV 98


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,963,243
Number of Sequences: 28952
Number of extensions: 213737
Number of successful extensions: 282
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 282
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1814318400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)