Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0578
(576 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY122220-1|AAM52732.1| 273|Drosophila melanogaster LP11234p pro... 146 2e-35
AE014134-937|AAN10546.1| 273|Drosophila melanogaster CG6957-PB,... 146 2e-35
AE014134-936|AAF52263.1| 273|Drosophila melanogaster CG6957-PA,... 146 2e-35
AY069515-1|AAL39660.1| 620|Drosophila melanogaster LD23533p pro... 33 0.28
AF177386-1|AAD51369.1| 3584|Drosophila melanogaster huntingtin h... 33 0.28
AF147779-1|AAF03256.1| 3583|Drosophila melanogaster Huntington d... 33 0.28
AF146362-1|AAF03255.1| 3583|Drosophila melanogaster Huntington d... 33 0.28
AE014297-4258|AAF56808.1| 3583|Drosophila melanogaster CG9995-PA... 33 0.28
AY089448-1|AAL90186.1| 344|Drosophila melanogaster AT26486p pro... 28 7.9
AE014298-1759|AAF48157.1| 344|Drosophila melanogaster CG2577-PA... 28 7.9
AE014297-3342|AAF56149.2| 699|Drosophila melanogaster CG10182-P... 28 7.9
>AY122220-1|AAM52732.1| 273|Drosophila melanogaster LP11234p
protein.
Length = 273
Score = 146 bits (353), Expect = 2e-35
Identities = 62/85 (72%), Positives = 71/85 (83%)
Frame = +1
Query: 253 VIEFHKEGKLSFKYVTTFNMDEYVGLPRDHPESYHYYMWNEFFKHIDIEPSNAHVLXGNA 432
+IEFHK+GK+SF+YV TFNMDEYVGL RDH ESYHY+MWN FFKHIDIEP N H+L GNA
Sbjct: 52 LIEFHKQGKVSFQYVKTFNMDEYVGLARDHHESYHYFMWNNFFKHIDIEPKNVHILDGNA 111
Query: 433 SDLVLXCQRFEKLIQXAGGVHLFIG 507
+DLV C +FE I+ AGGV LFIG
Sbjct: 112 ADLVAECNKFEDQIREAGGVELFIG 136
Score = 46.0 bits (104), Expect = 4e-05
Identities = 21/50 (42%), Positives = 28/50 (56%)
Frame = +2
Query: 101 MRLIILEDASIVADWAARFVLQRITQFAPGPGRHFVXXXXXXXXXXXMYK 250
MRL+ILE + V WAA++V++RI F P R+FV MYK
Sbjct: 1 MRLVILETSDSVGKWAAKYVMKRINDFQPSADRYFVLGLPTGSTPLGMYK 50
Score = 34.3 bits (75), Expect = 0.12
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +3
Query: 510 IGPDGHIAFNEPG 548
IGPDGHIAFNEPG
Sbjct: 138 IGPDGHIAFNEPG 150
>AE014134-937|AAN10546.1| 273|Drosophila melanogaster CG6957-PB,
isoform B protein.
Length = 273
Score = 146 bits (353), Expect = 2e-35
Identities = 62/85 (72%), Positives = 71/85 (83%)
Frame = +1
Query: 253 VIEFHKEGKLSFKYVTTFNMDEYVGLPRDHPESYHYYMWNEFFKHIDIEPSNAHVLXGNA 432
+IEFHK+GK+SF+YV TFNMDEYVGL RDH ESYHY+MWN FFKHIDIEP N H+L GNA
Sbjct: 52 LIEFHKQGKVSFQYVKTFNMDEYVGLARDHHESYHYFMWNNFFKHIDIEPKNVHILDGNA 111
Query: 433 SDLVLXCQRFEKLIQXAGGVHLFIG 507
+DLV C +FE I+ AGGV LFIG
Sbjct: 112 ADLVAECNKFEDQIREAGGVELFIG 136
Score = 46.0 bits (104), Expect = 4e-05
Identities = 21/50 (42%), Positives = 28/50 (56%)
Frame = +2
Query: 101 MRLIILEDASIVADWAARFVLQRITQFAPGPGRHFVXXXXXXXXXXXMYK 250
MRL+ILE + V WAA++V++RI F P R+FV MYK
Sbjct: 1 MRLVILETSDSVGKWAAKYVMKRINDFQPSADRYFVLGLPTGSTPLGMYK 50
Score = 34.3 bits (75), Expect = 0.12
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +3
Query: 510 IGPDGHIAFNEPG 548
IGPDGHIAFNEPG
Sbjct: 138 IGPDGHIAFNEPG 150
>AE014134-936|AAF52263.1| 273|Drosophila melanogaster CG6957-PA,
isoform A protein.
Length = 273
Score = 146 bits (353), Expect = 2e-35
Identities = 62/85 (72%), Positives = 71/85 (83%)
Frame = +1
Query: 253 VIEFHKEGKLSFKYVTTFNMDEYVGLPRDHPESYHYYMWNEFFKHIDIEPSNAHVLXGNA 432
+IEFHK+GK+SF+YV TFNMDEYVGL RDH ESYHY+MWN FFKHIDIEP N H+L GNA
Sbjct: 52 LIEFHKQGKVSFQYVKTFNMDEYVGLARDHHESYHYFMWNNFFKHIDIEPKNVHILDGNA 111
Query: 433 SDLVLXCQRFEKLIQXAGGVHLFIG 507
+DLV C +FE I+ AGGV LFIG
Sbjct: 112 ADLVAECNKFEDQIREAGGVELFIG 136
Score = 46.0 bits (104), Expect = 4e-05
Identities = 21/50 (42%), Positives = 28/50 (56%)
Frame = +2
Query: 101 MRLIILEDASIVADWAARFVLQRITQFAPGPGRHFVXXXXXXXXXXXMYK 250
MRL+ILE + V WAA++V++RI F P R+FV MYK
Sbjct: 1 MRLVILETSDSVGKWAAKYVMKRINDFQPSADRYFVLGLPTGSTPLGMYK 50
Score = 34.3 bits (75), Expect = 0.12
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +3
Query: 510 IGPDGHIAFNEPG 548
IGPDGHIAFNEPG
Sbjct: 138 IGPDGHIAFNEPG 150
>AY069515-1|AAL39660.1| 620|Drosophila melanogaster LD23533p
protein.
Length = 620
Score = 33.1 bits (72), Expect = 0.28
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 461 LRNSYRXLAECICSSEYRSGRSHRVQR 541
+RN+ R ++EC+ S E + G+ HR QR
Sbjct: 462 IRNAARSISECVASDEDKQGQGHRQQR 488
>AF177386-1|AAD51369.1| 3584|Drosophila melanogaster huntingtin
homolog protein.
Length = 3584
Score = 33.1 bits (72), Expect = 0.28
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 461 LRNSYRXLAECICSSEYRSGRSHRVQR 541
+RN+ R ++EC+ S E + G+ HR QR
Sbjct: 462 IRNAARSISECVASDEDKQGQGHRQQR 488
>AF147779-1|AAF03256.1| 3583|Drosophila melanogaster Huntington
disease protein homolog protein.
Length = 3583
Score = 33.1 bits (72), Expect = 0.28
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 461 LRNSYRXLAECICSSEYRSGRSHRVQR 541
+RN+ R ++EC+ S E + G+ HR QR
Sbjct: 462 IRNAARSISECVASDEDKQGQGHRQQR 488
>AF146362-1|AAF03255.1| 3583|Drosophila melanogaster Huntington
disease protein homolog protein.
Length = 3583
Score = 33.1 bits (72), Expect = 0.28
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 461 LRNSYRXLAECICSSEYRSGRSHRVQR 541
+RN+ R ++EC+ S E + G+ HR QR
Sbjct: 462 IRNAARSISECVASDEDKQGQGHRQQR 488
>AE014297-4258|AAF56808.1| 3583|Drosophila melanogaster CG9995-PA
protein.
Length = 3583
Score = 33.1 bits (72), Expect = 0.28
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 461 LRNSYRXLAECICSSEYRSGRSHRVQR 541
+RN+ R ++EC+ S E + G+ HR QR
Sbjct: 462 IRNAARSISECVASDEDKQGQGHRQQR 488
>AY089448-1|AAL90186.1| 344|Drosophila melanogaster AT26486p
protein.
Length = 344
Score = 28.3 bits (60), Expect = 7.9
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = +1
Query: 361 YMWNEFFKHIDIEPSNAHVLXGNASDLV--LXCQRFEKLIQXAGGVHL-FIGVSVRTVTS 531
Y+ N F H DI+P N + G S V + +K + GVH+ + T T+
Sbjct: 126 YVHNRGFLHRDIKPDNFLMGLGTMSKQVYLIDFGLSKKYLDITTGVHIPYREERSLTGTA 185
Query: 532 RSTNRGSFAGVSDA 573
R + G+ AGV A
Sbjct: 186 RYASIGAHAGVESA 199
>AE014298-1759|AAF48157.1| 344|Drosophila melanogaster CG2577-PA
protein.
Length = 344
Score = 28.3 bits (60), Expect = 7.9
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = +1
Query: 361 YMWNEFFKHIDIEPSNAHVLXGNASDLV--LXCQRFEKLIQXAGGVHL-FIGVSVRTVTS 531
Y+ N F H DI+P N + G S V + +K + GVH+ + T T+
Sbjct: 126 YVHNRGFLHRDIKPDNFLMGLGTMSKQVYLIDFGLSKKYLDITTGVHIPYREERSLTGTA 185
Query: 532 RSTNRGSFAGVSDA 573
R + G+ AGV A
Sbjct: 186 RYASIGAHAGVESA 199
>AE014297-3342|AAF56149.2| 699|Drosophila melanogaster CG10182-PA
protein.
Length = 699
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +1
Query: 349 SYHYYMWNEFFKHIDIEPSNAHVLXGNASDLVLXCQRFEKLIQXAGGVHLFI 504
SY YMW+ FF+ I+I + N + ++ F + A +HL I
Sbjct: 600 SYSVYMWHMFFQEINIRSMRTNSYFSNYTIMLNFWSTFGFAVLFAYVMHLVI 651
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,285,914
Number of Sequences: 53049
Number of extensions: 607277
Number of successful extensions: 1685
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1685
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2276053890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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