Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0578
         (576 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          25   0.41 
DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    24   0.94 
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    24   0.94 
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    24   0.94 
DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein ...    22   3.8  
AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein ...    22   3.8  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    22   5.0  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   6.6  
AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           21   8.7  
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           21   8.7  

>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 25.4 bits (53), Expect = 0.41
 Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
 Frame = +1

Query: 346 ESYHYYMWNEFFKHIDIEPSNAHVLXGNASDLVL-XCQR 459
           ES   Y W     HID +P +       A  +VL  CQR
Sbjct: 183 ESNENYNWEHKETHIDWQPEDEECTEATAGAVVLETCQR 221


>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 24.2 bits (50), Expect = 0.94
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -2

Query: 305 KVVTYLKDNFPSLWNSI 255
           KV+ +L +N P LW+S+
Sbjct: 89  KVIKFLVENKPELWDSL 105


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 24.2 bits (50), Expect = 0.94
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -2

Query: 305 KVVTYLKDNFPSLWNSI 255
           KV+ +L +N P LW+S+
Sbjct: 89  KVIKFLVENKPELWDSL 105


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 24.2 bits (50), Expect = 0.94
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -2

Query: 305 KVVTYLKDNFPSLWNSI 255
           KV+ +L +N P LW+S+
Sbjct: 89  KVIKFLVENKPELWDSL 105


>DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein 4
           protein.
          Length = 128

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 305 KVVTYLKDNFPSLW 264
           KVV +L DN P +W
Sbjct: 88  KVVQFLIDNKPEIW 101



 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -3

Query: 247 VHAEGRPTGGQAQHEVSSRTRSE 179
           + A+  PTG   QH + +R + E
Sbjct: 104 LEAKYDPTGAYKQHYLQNRVKEE 126


>AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein
           protein.
          Length = 128

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 305 KVVTYLKDNFPSLW 264
           KVV +L DN P +W
Sbjct: 88  KVVQFLIDNKPEIW 101



 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -3

Query: 247 VHAEGRPTGGQAQHEVSSRTRSE 179
           + A+  PTG   QH + +R + E
Sbjct: 104 LEAKYDPTGAYKQHYLQNRVKEE 126


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 14/41 (34%), Positives = 16/41 (39%)
 Frame = -3

Query: 247 VHAEGRPTGGQAQHEVSSRTRSELRDPLENESGGPVGNDAG 125
           V+  G     Q    V SR    L  PL+ E G P G   G
Sbjct: 366 VYRPGENPVTQRLPAVLSRIGIILASPLKREGGPPTGATTG 406


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = -1

Query: 225 PVGRPSTKCLPGPGANCVIRWRTNLAAQSAT 133
           P+G+  +KC       C +  +TNL+  S++
Sbjct: 703 PIGKALSKCHNRNVTTCNMFRKTNLSGDSSS 733


>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 69  SPLTCESNPELCVL 110
           SP  CE NP+L +L
Sbjct: 83  SPPFCEKNPKLGIL 96


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 69  SPLTCESNPELCVL 110
           SP  CE NP+L +L
Sbjct: 84  SPPFCEKNPKLGIL 97


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,802
Number of Sequences: 438
Number of extensions: 3385
Number of successful extensions: 17
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16626408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)