Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0578
(576 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g49730.3 68414.m05576 protein kinase family protein contains ... 30 1.3
At1g49730.2 68414.m05577 protein kinase family protein contains ... 30 1.3
At1g49730.1 68414.m05575 protein kinase family protein contains ... 30 1.3
At3g43320.1 68416.m04579 hypothetical protein 29 1.7
At5g13380.1 68418.m01541 auxin-responsive GH3 family protein sim... 29 2.2
At5g13370.1 68418.m01540 auxin-responsive GH3 family protein sim... 29 2.2
At4g01610.2 68417.m00211 cathepsin B-like cysteine protease, put... 29 2.9
At4g01610.1 68417.m00210 cathepsin B-like cysteine protease, put... 29 2.9
At4g17950.1 68417.m02673 DNA-binding family protein contains Pfa... 28 3.9
At1g75890.1 68414.m08815 family II extracellular lipase 2 (EXL2)... 28 3.9
At5g40150.1 68418.m04872 peroxidase, putative identical to perox... 28 5.1
At5g13360.1 68418.m01539 auxin-responsive GH3 family protein sim... 27 9.0
At1g54560.1 68414.m06222 myosin, putative similar to myosin GI:4... 27 9.0
At1g08730.1 68414.m00969 myosin heavy chain (PCR43) identical to... 27 9.0
At1g02305.1 68414.m00175 cathepsin B-like cysteine protease, put... 27 9.0
>At1g49730.3 68414.m05576 protein kinase family protein contains
Pfam PF00069: Protein kinase domain; similar to AtPK2324
(GI:1785621) [Arabidopsis thaliana]; similar to
receptor-like protein kinase (GI:1644291) [Catharanthus
roseus]; similar to somatic embryogenesis receptor-like
kinase (GI:2224911) [Daucus carota]
Length = 394
Score = 29.9 bits (64), Expect = 1.3
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = -2
Query: 299 VTYLKDNFPSLWNSITVCTCRGASH 225
+TYL++ + N+IT+CTCR A++
Sbjct: 102 ITYLRNLIGAETNNITLCTCRDATY 126
>At1g49730.2 68414.m05577 protein kinase family protein contains
Pfam PF00069: Protein kinase domain; similar to AtPK2324
(GI:1785621) [Arabidopsis thaliana]; similar to
receptor-like protein kinase (GI:1644291) [Catharanthus
roseus]; similar to somatic embryogenesis receptor-like
kinase (GI:2224911) [Daucus carota]
Length = 450
Score = 29.9 bits (64), Expect = 1.3
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = -2
Query: 299 VTYLKDNFPSLWNSITVCTCRGASH 225
+TYL++ + N+IT+CTCR A++
Sbjct: 158 ITYLRNLIGAETNNITLCTCRDATY 182
>At1g49730.1 68414.m05575 protein kinase family protein contains
Pfam PF00069: Protein kinase domain; similar to AtPK2324
(GI:1785621) [Arabidopsis thaliana]; similar to
receptor-like protein kinase (GI:1644291) [Catharanthus
roseus]; similar to somatic embryogenesis receptor-like
kinase (GI:2224911) [Daucus carota]
Length = 663
Score = 29.9 bits (64), Expect = 1.3
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = -2
Query: 299 VTYLKDNFPSLWNSITVCTCRGASH 225
+TYL++ + N+IT+CTCR A++
Sbjct: 158 ITYLRNLIGAETNNITLCTCRDATY 182
>At3g43320.1 68416.m04579 hypothetical protein
Length = 510
Score = 29.5 bits (63), Expect = 1.7
Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 6/80 (7%)
Frame = -3
Query: 325 PHTRPC*KWSHI*KITSL----PCGTL--SPFVHAEGRPTGGQAQHEVSSRTRSELRDPL 164
PH + C KW H+ L P TL SP E + + H VS++ EL + L
Sbjct: 300 PHCQVCKKWGHLRDSCLLEKQKPTSTLNNSPVSEKEPQKIVVEEAH-VSTKVVEELFNNL 358
Query: 163 ENESGGPVGNDAGIFENYKT 104
++SG V + + N KT
Sbjct: 359 PSQSGVSVALETKVQSNTKT 378
>At5g13380.1 68418.m01541 auxin-responsive GH3 family protein
similar to auxin-responsive GH3 product [Glycine max]
GI:18591; contains Pfam profile PF03321: GH3
auxin-responsive promoter
Length = 624
Score = 29.1 bits (62), Expect = 2.2
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = -2
Query: 332 GRPTYSSMLKVVTYLKDNFPSLWNSI 255
G P SS LKV+ +L+D++P L ++I
Sbjct: 246 GAPYASSFLKVIKFLEDHWPELCSNI 271
>At5g13370.1 68418.m01540 auxin-responsive GH3 family protein
similar to auxin-responsive GH3 product [Glycine max]
GI:18591; contains Pfam profile PF03321: GH3
auxin-responsive promoter
Length = 595
Score = 29.1 bits (62), Expect = 2.2
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = -2
Query: 332 GRPTYSSMLKVVTYLKDNFPSLWNSI 255
G P SS LKV+ +L+D++P L ++I
Sbjct: 216 GAPFASSFLKVIKFLEDHWPELCSNI 241
>At4g01610.2 68417.m00211 cathepsin B-like cysteine protease,
putative similar to cathepsin B-like cysteine proteinase
GI:609175 from [Nicotiana rustica]; contains an
unusually short, 5nt exon
Length = 359
Score = 28.7 bits (61), Expect = 2.9
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = -3
Query: 208 HEVSSRT-RSELRDPL-ENESGGPVGNDAGIFENYKTHSSGLLSHVSGDNI 62
+ VS+ T +S +D + E GPV ++E++ + SG+ H++G NI
Sbjct: 233 YSVSTYTVKSNPQDIMAEVYKNGPVEVSFTVYEDFAHYKSGVYKHITGSNI 283
>At4g01610.1 68417.m00210 cathepsin B-like cysteine protease,
putative similar to cathepsin B-like cysteine proteinase
GI:609175 from [Nicotiana rustica]; contains an
unusually short, 5nt exon
Length = 359
Score = 28.7 bits (61), Expect = 2.9
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = -3
Query: 208 HEVSSRT-RSELRDPL-ENESGGPVGNDAGIFENYKTHSSGLLSHVSGDNI 62
+ VS+ T +S +D + E GPV ++E++ + SG+ H++G NI
Sbjct: 233 YSVSTYTVKSNPQDIMAEVYKNGPVEVSFTVYEDFAHYKSGVYKHITGSNI 283
>At4g17950.1 68417.m02673 DNA-binding family protein contains Pfam
PF03479: Domain of unknown function (DUF296); contains
Pfam PF02178: AT hook motif;
Length = 439
Score = 28.3 bits (60), Expect = 3.9
Identities = 19/56 (33%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = -3
Query: 277 SLPCGTLS-PFVHAEGRPTGGQAQHEVSSRTRSELRDPLENESGGPVGNDAGIFEN 113
S P LS V G P QH S +E PL S N+ GIF N
Sbjct: 360 SAPANMLSFGGVGGPGSPRSQGQQHSSESSEENESNSPLHRRSNNNNSNNHGIFGN 415
>At1g75890.1 68414.m08815 family II extracellular lipase 2 (EXL2)
EXL2 (PMID:11431566); similar to anter-specific
proline-rich protein (APG) SP:P40602 [Arabidopsis
thaliana]
Length = 379
Score = 28.3 bits (60), Expect = 3.9
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = -1
Query: 234 GVPPVGR-PSTKCLPG-PGANCVIRWRTNLAAQSATMLASSRIIRRIVRD 91
G PPVG PS + L G P NCV+R+ + + A+ + R + D
Sbjct: 248 GAPPVGCVPSQRTLAGGPTRNCVVRFNDATKLYNVKLAANLGSLSRTLGD 297
>At5g40150.1 68418.m04872 peroxidase, putative identical to
peroxidase ATP26a {Arabidopsis thaliana}
GP|1890317|emb|CAA72487
Length = 328
Score = 27.9 bits (59), Expect = 5.1
Identities = 23/64 (35%), Positives = 30/64 (46%)
Frame = -1
Query: 198 LPGPGANCVIRWRTNLAAQSATMLASSRIIRRIVRDYFHTLAVTISYYGQYERIPLLEKQ 19
LPG G + VIR +T L ++ S II VRD L VT+ G Y I L +
Sbjct: 103 LPGDGFDVVIRAKTALELACPNTVSCSDIIAVAVRD----LLVTVG--GPYYEISLGRRD 156
Query: 18 KTTA 7
T+
Sbjct: 157 SRTS 160
>At5g13360.1 68418.m01539 auxin-responsive GH3 family protein
similar to auxin-responsive GH3 product [Glycine max]
GI:18591; contains Pfam profile PF03321: GH3
auxin-responsive promoter
Length = 594
Score = 27.1 bits (57), Expect = 9.0
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -2
Query: 332 GRPTYSSMLKVVTYLKDNFPSLWNSI 255
G P SS LK++ +L+D++P ++I
Sbjct: 216 GAPFASSFLKIIKFLEDHWPEFCSNI 241
>At1g54560.1 68414.m06222 myosin, putative similar to myosin
GI:433663 from [Arabidopsis thaliana]
Length = 1529
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/56 (21%), Positives = 29/56 (51%)
Frame = +1
Query: 340 HPESYHYYMWNEFFKHIDIEPSNAHVLXGNASDLVLXCQRFEKLIQXAGGVHLFIG 507
HP+++HY ++ F+ + I ++ ++ A D+V ++ ++ I L +G
Sbjct: 278 HPKTFHYLNQSKCFELVGISDAHDYIATRRAMDIVGMSEKEQEAIFRVVAAILHLG 333
>At1g08730.1 68414.m00969 myosin heavy chain (PCR43) identical to
myosin heavy chain PCR43 (PIR:T00727) [Arabidopsis
thaliana]; similar to ESTs gb|R30087 and gb|AA394762
Length = 1538
Score = 27.1 bits (57), Expect = 9.0
Identities = 13/56 (23%), Positives = 29/56 (51%)
Frame = +1
Query: 340 HPESYHYYMWNEFFKHIDIEPSNAHVLXGNASDLVLXCQRFEKLIQXAGGVHLFIG 507
HP+++HY ++ F+ + I ++ ++ A D+V ++ ++ I L IG
Sbjct: 283 HPKTFHYLNQSKCFELVGISDAHDYLATRRAMDIVGISEKEQEAIFRVVAAILHIG 338
>At1g02305.1 68414.m00175 cathepsin B-like cysteine protease,
putative similar to cathepsin B-like cysteine proteinase
[Nicotiana rustica] GI:609175; contains Pfam profile
PF00112: Papain family cysteine protease
Length = 362
Score = 27.1 bits (57), Expect = 9.0
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -3
Query: 148 GPVGNDAGIFENYKTHSSGLLSHVSGDNI 62
GPV ++E++ + SG+ H++G NI
Sbjct: 258 GPVEVAFTVYEDFAHYKSGVYKHITGTNI 286
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,819,320
Number of Sequences: 28952
Number of extensions: 271264
Number of successful extensions: 799
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 784
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 799
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1121903184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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