Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0577
(790 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 170 8e-43
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 164 6e-41
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 164 6e-41
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 144 5e-35
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 138 3e-33
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 113 2e-25
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 113 2e-25
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 103 1e-22
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 69 3e-12
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 69 3e-12
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 65 6e-11
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 65 6e-11
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 65 6e-11
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 39 0.005
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 38 0.011
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 34 0.10
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 33 0.18
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 33 0.23
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 33 0.31
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 33 0.31
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 32 0.41
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 32 0.54
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 32 0.54
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 31 0.71
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 31 0.94
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 31 0.94
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 31 0.94
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 31 0.94
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 30 2.2
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 29 2.9
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 29 2.9
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 29 2.9
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 29 2.9
Z49938-5|CAD31752.1| 1467|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z49938-4|CAA90189.3| 2180|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z46811-2|CAD31753.1| 1467|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z46811-1|CAA86842.3| 2180|Caenorhabditis elegans Hypothetical pr... 29 3.8
AF316540-1|AAK01633.1| 1487|Caenorhabditis elegans PTP-3B protein. 29 3.8
AF316539-1|AAK01632.1| 2200|Caenorhabditis elegans PTP-3A protein. 29 3.8
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 5.0
U97002-9|AAB52261.2| 985|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 28 8.8
AC084152-1|AAM69074.2| 332|Caenorhabditis elegans Hypothetical ... 28 8.8
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 170 bits (414), Expect = 8e-43
Identities = 96/143 (67%), Positives = 100/143 (69%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 435
TIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNG
Sbjct: 72 TIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNG 131
Query: 436 QTREHALLAFTLGVKQLIVGVNKMVPLNHHTVSPDLRKSRRKYPHTSRRLATTQLLSLSC 615
QTREHALLA TLGVKQL V L T SPD +SRR T Q L
Sbjct: 132 QTREHALLAQTLGVKQL-------VSLRSPTRSPD----------SSRRSDTIQRLFHLS 174
Query: 616 PFLDGTETTCWSLQPKCLGSRDG 684
D TETTC C GSRDG
Sbjct: 175 QSPDSTETTCLRSPRTCHGSRDG 197
Score = 144 bits (350), Expect = 5e-35
Identities = 66/68 (97%), Positives = 67/68 (98%)
Frame = +3
Query: 45 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 224
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 225 DKLKAERD 248
DKLKAER+
Sbjct: 61 DKLKAERE 68
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 164 bits (399), Expect = 6e-41
Identities = 77/84 (91%), Positives = 80/84 (95%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 435
TIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNG
Sbjct: 72 TIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNG 131
Query: 436 QTREHALLAFTLGVKQLIVGVNKM 507
QTREHALLA TLGVKQLIV NKM
Sbjct: 132 QTREHALLAQTLGVKQLIVACNKM 155
Score = 144 bits (350), Expect = 5e-35
Identities = 66/68 (97%), Positives = 67/68 (98%)
Frame = +3
Query: 45 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 224
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 225 DKLKAERD 248
DKLKAER+
Sbjct: 61 DKLKAERE 68
Score = 101 bits (242), Expect = 6e-22
Identities = 44/58 (75%), Positives = 49/58 (84%)
Frame = +3
Query: 510 STEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGW 683
STEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE S+ MPWFKGW
Sbjct: 157 STEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGW 214
Score = 35.9 bits (79), Expect = 0.033
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +2
Query: 674 QGMAVERKEGKAXGXCLIEALDAIL 748
+G AVERKEG A G L+EALD+I+
Sbjct: 212 KGWAVERKEGNASGKTLLEALDSII 236
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 164 bits (399), Expect = 6e-41
Identities = 77/84 (91%), Positives = 80/84 (95%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 435
TIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNG
Sbjct: 72 TIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNG 131
Query: 436 QTREHALLAFTLGVKQLIVGVNKM 507
QTREHALLA TLGVKQLIV NKM
Sbjct: 132 QTREHALLAQTLGVKQLIVACNKM 155
Score = 144 bits (350), Expect = 5e-35
Identities = 66/68 (97%), Positives = 67/68 (98%)
Frame = +3
Query: 45 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 224
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 225 DKLKAERD 248
DKLKAER+
Sbjct: 61 DKLKAERE 68
Score = 101 bits (242), Expect = 6e-22
Identities = 44/58 (75%), Positives = 49/58 (84%)
Frame = +3
Query: 510 STEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGW 683
STEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE S+ MPWFKGW
Sbjct: 157 STEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGW 214
Score = 35.9 bits (79), Expect = 0.033
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +2
Query: 674 QGMAVERKEGKAXGXCLIEALDAIL 748
+G AVERKEG A G L+EALD+I+
Sbjct: 212 KGWAVERKEGNASGKTLLEALDSII 236
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 144 bits (350), Expect = 5e-35
Identities = 66/68 (97%), Positives = 67/68 (98%)
Frame = +3
Query: 45 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 224
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 225 DKLKAERD 248
DKLKAER+
Sbjct: 61 DKLKAERE 68
Score = 101 bits (242), Expect = 6e-22
Identities = 44/58 (75%), Positives = 49/58 (84%)
Frame = +3
Query: 510 STEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGW 683
STEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE S+ MPWFKGW
Sbjct: 123 STEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGW 180
Score = 98.3 bits (234), Expect = 5e-21
Identities = 43/46 (93%), Positives = 46/46 (100%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 393
TIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 72 TIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
Score = 35.9 bits (79), Expect = 0.033
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +2
Query: 674 QGMAVERKEGKAXGXCLIEALDAIL 748
+G AVERKEG A G L+EALD+I+
Sbjct: 178 KGWAVERKEGNASGKTLLEALDSII 202
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 138 bits (335), Expect = 3e-33
Identities = 63/67 (94%), Positives = 64/67 (95%)
Frame = +3
Query: 45 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 224
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 225 DKLKAER 245
DKLK +
Sbjct: 61 DKLKVTK 67
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 113 bits (271), Expect = 2e-25
Identities = 53/84 (63%), Positives = 63/84 (75%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 435
T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE G G
Sbjct: 235 TMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFENGG 294
Query: 436 QTREHALLAFTLGVKQLIVGVNKM 507
QT+EHALL +LGV QLIV VNK+
Sbjct: 295 QTKEHALLLRSLGVTQLIVAVNKL 318
Score = 81.8 bits (193), Expect = 5e-16
Identities = 35/65 (53%), Positives = 48/65 (73%)
Frame = +3
Query: 54 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 233
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226
Query: 234 KAERD 248
+ ER+
Sbjct: 227 EEERE 231
Score = 37.5 bits (83), Expect = 0.011
Identities = 17/53 (32%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Frame = +3
Query: 525 YSEPRFEEIKKEVSSYI-KKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 680
+S+ RF+EIK +S ++ ++ G++ FVP+SG+ G+N+++ ++ W+ G
Sbjct: 323 WSQDRFDEIKNNLSVFLTRQAGFSKPK--FVPVSGFTGENLIK-RMELDWYDG 372
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 113 bits (271), Expect = 2e-25
Identities = 53/84 (63%), Positives = 63/84 (75%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 435
T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE G G
Sbjct: 253 TMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFENGG 312
Query: 436 QTREHALLAFTLGVKQLIVGVNKM 507
QT+EHALL +LGV QLIV VNK+
Sbjct: 313 QTKEHALLLRSLGVTQLIVAVNKL 336
Score = 81.8 bits (193), Expect = 5e-16
Identities = 35/65 (53%), Positives = 48/65 (73%)
Frame = +3
Query: 54 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 233
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244
Query: 234 KAERD 248
+ ER+
Sbjct: 245 EEERE 249
Score = 37.5 bits (83), Expect = 0.011
Identities = 17/53 (32%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Frame = +3
Query: 525 YSEPRFEEIKKEVSSYI-KKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 680
+S+ RF+EIK +S ++ ++ G++ FVP+SG+ G+N+++ ++ W+ G
Sbjct: 341 WSQDRFDEIKNNLSVFLTRQAGFSKPK--FVPVSGFTGENLIK-RMELDWYDG 390
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 103 bits (247), Expect = 1e-22
Identities = 45/84 (53%), Positives = 61/84 (72%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 435
T+++ FET K + TI+DAPGH+ F+ NMI G +QAD AVL+++A GEFE G + G
Sbjct: 174 TVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRGEFETGFDRGG 233
Query: 436 QTREHALLAFTLGVKQLIVGVNKM 507
QTREH++L T GVK L++ VNKM
Sbjct: 234 QTREHSMLVKTAGVKHLVILVNKM 257
Score = 77.8 bits (183), Expect = 8e-15
Identities = 33/67 (49%), Positives = 48/67 (71%)
Frame = +3
Query: 48 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 227
G K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163
Query: 228 KLKAERD 248
ER+
Sbjct: 164 TNDEERE 170
Score = 36.7 bits (81), Expect = 0.019
Identities = 17/55 (30%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Frame = +3
Query: 525 YSEPRFEEIKKEVSSYIKKIGYNPAA-VAFVPISGWHGDNMLEPST--KMPWFKG 680
+ E RF+EI+ +++ +++K+G+NP + +VP SG G + + T + W+ G
Sbjct: 264 WEEERFKEIEGKLTPFLRKLGFNPKTDITYVPCSGLTGAFIKDRPTGSEGNWYSG 318
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 69.3 bits (162), Expect = 3e-12
Identities = 38/83 (45%), Positives = 51/83 (61%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 435
TI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G E
Sbjct: 95 TINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME------- 147
Query: 436 QTREHALLAFTLGVKQLIVGVNK 504
QT+EH +LA +GVK + + +NK
Sbjct: 148 QTKEHLILAKQVGVKNMAIFINK 170
Score = 28.7 bits (61), Expect = 5.0
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 57 KTHINIVVIGHVDSGKSTTT 116
K ++N+ IGH+D GK+T T
Sbjct: 43 KINVNVGTIGHIDHGKTTLT 62
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 69.3 bits (162), Expect = 3e-12
Identities = 38/83 (45%), Positives = 51/83 (61%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 435
TI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G E
Sbjct: 95 TINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME------- 147
Query: 436 QTREHALLAFTLGVKQLIVGVNK 504
QT+EH +LA +GVK + + +NK
Sbjct: 148 QTKEHLILAKQVGVKNMAIFINK 170
Score = 28.7 bits (61), Expect = 5.0
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 57 KTHINIVVIGHVDSGKSTTT 116
K ++N+ IGH+D GK+T T
Sbjct: 43 KINVNVGTIGHIDHGKTTLT 62
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 64.9 bits (151), Expect = 6e-11
Identities = 38/86 (44%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 435
TI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 99 TINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP------- 151
Query: 436 QTREHALLAFTLGV--KQLIVGVNKM 507
QTREH LLA +GV ++V +NK+
Sbjct: 152 QTREHLLLARQVGVPLDNIVVFMNKV 177
Score = 38.7 bits (86), Expect = 0.005
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +3
Query: 51 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 221
++K H+N+ IGHVD GK+T T ++ G R E + +E +G A+
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFH 104
Query: 222 LDKLKAERDXVH 257
L+ A+R H
Sbjct: 105 LEYETAKRHYAH 116
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 64.9 bits (151), Expect = 6e-11
Identities = 38/86 (44%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 435
TI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 100 TINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP------- 152
Query: 436 QTREHALLAFTLGV--KQLIVGVNKM 507
QTREH LLA +GV ++V +NK+
Sbjct: 153 QTREHLLLARQVGVPLDNIVVFMNKV 178
Score = 38.7 bits (86), Expect = 0.005
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +3
Query: 51 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 221
++K H+N+ IGHVD GK+T T ++ G R E + +E +G A+
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFH 105
Query: 222 LDKLKAERDXVH 257
L+ A+R H
Sbjct: 106 LEYETAKRHYAH 117
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 64.9 bits (151), Expect = 6e-11
Identities = 38/86 (44%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 435
TI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 100 TINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP------- 152
Query: 436 QTREHALLAFTLGV--KQLIVGVNKM 507
QTREH LLA +GV ++V +NK+
Sbjct: 153 QTREHLLLARQVGVPLDNIVVFMNKV 178
Score = 38.7 bits (86), Expect = 0.005
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +3
Query: 51 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 221
++K H+N+ IGHVD GK+T T ++ G R E + +E +G A+
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFH 105
Query: 222 LDKLKAERDXVH 257
L+ A+R H
Sbjct: 106 LEYETAKRHYAH 117
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 38.7 bits (86), Expect = 0.005
Identities = 25/86 (29%), Positives = 43/86 (50%)
Frame = +1
Query: 301 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 480
+ +ID PGH I+ ++ ++ D A++I+ + AGI QT EH LLA
Sbjct: 74 LALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAGIQP--QTAEHLLLASKFCPN 126
Query: 481 QLIVGVNKMVPLNHHTVSPDLRKSRR 558
++I+ +NK +S +K R+
Sbjct: 127 RVIIVLNKCDLAEKSKISESAKKVRK 152
Score = 28.7 bits (61), Expect = 5.0
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 66 INIVVIGHVDSGKSTTT 116
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 37.5 bits (83), Expect = 0.011
Identities = 27/69 (39%), Positives = 32/69 (46%)
Frame = +1
Query: 301 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 480
VT +D PGH F G AD VL+VAA G E QT + A V
Sbjct: 206 VTFLDTPGHAAFASMRARGAKGADIVVLVVAADDGVKE-------QTAQSIKFAKDANV- 257
Query: 481 QLIVGVNKM 507
QL+V VNK+
Sbjct: 258 QLVVAVNKI 266
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 34.3 bits (75), Expect = 0.10
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +3
Query: 69 NIVVIGHVDSGKSTTTGHLIYKCGGI 146
NI VI HVD+GK+T T L+Y G I
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAI 52
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 33.5 bits (73), Expect = 0.18
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -3
Query: 503 LFTPTMSCLTPRVKASKACSRV*PFLEIPASNSPVPAATMSTA 375
LF PT+SC+ + AS S P + PA N VP AT+S +
Sbjct: 13 LFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 33.1 bits (72), Expect = 0.23
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 69 NIVVIGHVDSGKSTTTGHLIYKCGGID 149
NI + H+DSGK+T T ++Y G ID
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRID 72
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 32.7 bits (71), Expect = 0.31
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 45 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 140
M +++ N+ VI HVD GKST T L+ K G
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 44
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 405
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSG 146
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 32.7 bits (71), Expect = 0.31
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 45 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 140
M +++ N+ VI HVD GKST T L+ K G
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 44
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 405
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALVVVDCVSG 146
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 32.3 bits (70), Expect = 0.41
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +3
Query: 69 NIVVIGHVDSGKSTTTGHLIYKCGGI---DKRTIEKFEKEAQ 185
N ++ HVD GKST L+ CG + K+ ++K + E +
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPGQKQMLDKLQVERE 85
Score = 32.3 bits (70), Expect = 0.41
Identities = 23/71 (32%), Positives = 34/71 (47%)
Frame = +1
Query: 295 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLG 474
Y + +ID PGH DF + + D +L+VAA G QT + LAF
Sbjct: 102 YLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG-------VQAQTIANFWLAFEKN 154
Query: 475 VKQLIVGVNKM 507
+ Q+I +NK+
Sbjct: 155 I-QIIPVINKI 164
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 31.9 bits (69), Expect = 0.54
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +1
Query: 241 SVTXYTIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 405
S+ + I + Y + IID PGH +F M AD V++V A G
Sbjct: 183 SIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 31.9 bits (69), Expect = 0.54
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +1
Query: 241 SVTXYTIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 405
S+ + I + Y + IID PGH +F M AD V++V A G
Sbjct: 58 SIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 112
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 31.5 bits (68), Expect = 0.71
Identities = 19/70 (27%), Positives = 31/70 (44%)
Frame = +1
Query: 298 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 477
+V+ +D PGH + M+ G + D A L+VA QT EH + +
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVAGNEP------CPQPQTSEHLAAVEIMQL 181
Query: 478 KQLIVGVNKM 507
L++ NK+
Sbjct: 182 NHLMILQNKV 191
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 31.1 bits (67), Expect = 0.94
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +3
Query: 147 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERD 248
+KR ++ EKE + F Y LDK+K ERD
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 31.1 bits (67), Expect = 0.94
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +3
Query: 147 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERD 248
+KR ++ EKE + F Y LDK+K ERD
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 31.1 bits (67), Expect = 0.94
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +3
Query: 21 FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 131
++IRD P K+ + V+G+VD+GKST G L +
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 31.1 bits (67), Expect = 0.94
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +3
Query: 21 FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 131
++IRD P K+ + V+G+VD+GKST G L +
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 307 IIDAPGHRDFIKNMITGTSQADCAVLIV 390
IID PGH F G+S D A+L+V
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV 580
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 565 PHTSRRLATTQLLSLSCPFLD 627
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 565 PHTSRRLATTQLLSLSCPFLD 627
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 565 PHTSRRLATTQLLSLSCPFLD 627
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 565 PHTSRRLATTQLLSLSCPFLD 627
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>Z49938-5|CAD31752.1| 1467|Caenorhabditis elegans Hypothetical
protein C09D8.1b protein.
Length = 1467
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Frame = +1
Query: 199 DPSNMLGYWTN*RLSVTXYTIDIALWKFETSK---YYVTIIDAPGHR 330
DP+ ++G TN R+ T + + W FE+ K + V + PG+R
Sbjct: 338 DPAALVGPPTNVRVEATSNSTAVVQWDFESQKADSFVVKYMHEPGNR 384
>Z49938-4|CAA90189.3| 2180|Caenorhabditis elegans Hypothetical protein
C09D8.1a protein.
Length = 2180
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Frame = +1
Query: 199 DPSNMLGYWTN*RLSVTXYTIDIALWKFETSK---YYVTIIDAPGHR 330
DP+ ++G TN R+ T + + W FE+ K + V + PG+R
Sbjct: 1051 DPAALVGPPTNVRVEATSNSTAVVQWDFESQKADSFVVKYMHEPGNR 1097
>Z46811-2|CAD31753.1| 1467|Caenorhabditis elegans Hypothetical
protein C09D8.1b protein.
Length = 1467
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Frame = +1
Query: 199 DPSNMLGYWTN*RLSVTXYTIDIALWKFETSK---YYVTIIDAPGHR 330
DP+ ++G TN R+ T + + W FE+ K + V + PG+R
Sbjct: 338 DPAALVGPPTNVRVEATSNSTAVVQWDFESQKADSFVVKYMHEPGNR 384
>Z46811-1|CAA86842.3| 2180|Caenorhabditis elegans Hypothetical protein
C09D8.1a protein.
Length = 2180
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Frame = +1
Query: 199 DPSNMLGYWTN*RLSVTXYTIDIALWKFETSK---YYVTIIDAPGHR 330
DP+ ++G TN R+ T + + W FE+ K + V + PG+R
Sbjct: 1051 DPAALVGPPTNVRVEATSNSTAVVQWDFESQKADSFVVKYMHEPGNR 1097
>AF316540-1|AAK01633.1| 1487|Caenorhabditis elegans PTP-3B protein.
Length = 1487
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Frame = +1
Query: 199 DPSNMLGYWTN*RLSVTXYTIDIALWKFETSK---YYVTIIDAPGHR 330
DP+ ++G TN R+ T + + W FE+ K + V + PG+R
Sbjct: 338 DPAALVGPPTNVRVEATSNSTAVVQWDFESQKADSFVVKYMHEPGNR 384
>AF316539-1|AAK01632.1| 2200|Caenorhabditis elegans PTP-3A protein.
Length = 2200
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Frame = +1
Query: 199 DPSNMLGYWTN*RLSVTXYTIDIALWKFETSK---YYVTIIDAPGHR 330
DP+ ++G TN R+ T + + W FE+ K + V + PG+R
Sbjct: 1051 DPAALVGPPTNVRVEATSNSTAVVQWDFESQKADSFVVKYMHEPGNR 1097
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 5.0
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 66 INIVVIGHVDSGKSTTT 116
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>U97002-9|AAB52261.2| 985|Caenorhabditis elegans Hypothetical
protein K09H11.1 protein.
Length = 985
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -2
Query: 333 ISVXRSIND-GNIVLASFELPESNIDCVPXHAQPL 232
+S ++I+D GNI+ +F P DC+P P+
Sbjct: 197 VSSQQAIHDLGNILKLNFSYPPETRDCIPREVLPI 231
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 27.9 bits (59), Expect = 8.8
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +1
Query: 301 VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 396
V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
>AC084152-1|AAM69074.2| 332|Caenorhabditis elegans Hypothetical
protein Y102A11A.9 protein.
Length = 332
Score = 27.9 bits (59), Expect = 8.8
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +3
Query: 144 IDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERDXVHNRYCSLEVRN 287
+DK ++ KE E+ K KYA KLK + V N Y S+ +N
Sbjct: 188 LDKSRVKTASKERNELAK---KYAEQNAKLKLKLKEVKNNYASMLEKN 232
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,851,564
Number of Sequences: 27780
Number of extensions: 379158
Number of successful extensions: 1179
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1065
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1170
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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