Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0576
         (642 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_02_0134 + 5667236-5669295,5669833-5669902,5670266-5670376           29   2.4  
02_02_0492 - 10907529-10907629,10907714-10907953,10908035-109080...    29   4.1  
02_02_0490 - 10879761-10879861,10879946-10880185,10880274-108803...    28   5.5  
11_05_0037 - 18518414-18519078,18519203-18519254                       28   7.2  
02_01_0198 + 1334563-1334994,1335872-1335919,1336096-1336351,133...    28   7.2  

>10_02_0134 + 5667236-5669295,5669833-5669902,5670266-5670376
          Length = 746

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = +1

Query: 16  GSSTTGLLGRGVSYSD*WWLRDDGLHQGTNG 108
           GS T G +G G   SD WW +D+G   G+NG
Sbjct: 369 GSRTGGTMGSGTG-SDWWWKQDNG--GGSNG 396


>02_02_0492 -
           10907529-10907629,10907714-10907953,10908035-10908098,
           10908416-10908721,10909347-10909561,10909656-10909950,
           10910493-10910597,10911112-10911180,10911433-10911519,
           10911953-10913704,10914964-10915054,10915217-10915488
          Length = 1198

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
 Frame = +1

Query: 214 HREKLRQVHECRCRKQFMEMYKMG-MLPRGETFVHTNELQMEEAVKVFRVLYYAKDFDVF 390
           HRE+  +V E  C K+ ME+  +G     GE  ++ +  Q ++ +++ R LY  +D D+F
Sbjct: 630 HRERYEKVLEACCLKKDMEILPLGDQTIIGERGINLSGGQ-KQRMQIARALY--QDADIF 686

Query: 391 M 393
           +
Sbjct: 687 L 687


>02_02_0490 -
           10879761-10879861,10879946-10880185,10880274-10880337,
           10880426-10880731,10881098-10881312,10881417-10881711,
           10882193-10882357,10882477-10882527,10882657-10883109,
           10883195-10883281,10883736-10884800,10884858-10885376
          Length = 1186

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
 Frame = +1

Query: 214 HREKLRQVHECRCRKQFMEMYKMG-MLPRGETFVHTNELQMEEAVKVFRVLYYAKDFDVF 390
           HRE+  +V E  C K+ +E+  +G     GE  ++ +  Q ++ +++ R LY  +D D+F
Sbjct: 453 HRERYEKVLEACCLKKDLEILPLGDQTIIGERGINLSGGQ-KQRIQIARALY--QDADIF 509

Query: 391 M 393
           +
Sbjct: 510 L 510


>11_05_0037 - 18518414-18519078,18519203-18519254
          Length = 238

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 16/55 (29%), Positives = 29/55 (52%)
 Frame = -1

Query: 525 RSRDRSVRSGQVETLAVGSVEARGSKSVDEHASVDPFSHPARSPHENIEVLSVVE 361
           RSRDRS+   ++  +A G+ +A     V   +SV+ +  P    H   + ++V+E
Sbjct: 153 RSRDRSIGPLEIRVVAPGAFDALMDMCVSHGSSVNQYKTPRCIKHP--DAIAVLE 205


>02_01_0198 +
           1334563-1334994,1335872-1335919,1336096-1336351,
           1336733-1336881,1336969-1337097,1337425-1337592,
           1338416-1338610
          Length = 458

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +3

Query: 24  YYWPAWPRRQLQRLVVATGR 83
           + WP WP   + RLVVAT +
Sbjct: 88  FRWPGWPGASVFRLVVATDK 107


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,698,267
Number of Sequences: 37544
Number of extensions: 334594
Number of successful extensions: 912
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 912
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1584867848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)