Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0576
         (642 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC146771-1|AAI46772.1| 1649|Homo sapiens CTD-binding SR-like pro...    32   2.0  
AB040975-1|BAA96066.1| 1654|Homo sapiens KIAA1542 protein protein.     32   2.0  
BC047713-1|AAH47713.1|  791|Homo sapiens DOCK11 protein protein.       30   6.1  
AY692226-1|AAU04438.1| 2073|Homo sapiens Cdc42-associated guanin...    30   6.1  
AL391280-3|CAI41411.1| 2077|Homo sapiens dedicator of cytokinesi...    30   6.1  
AL391237-2|CAI41407.1| 2077|Homo sapiens dedicator of cytokinesi...    30   6.1  
AK125641-1|BAC86230.1| 1215|Homo sapiens 1, beta, convertase) (C...    30   6.1  
AK056684-1|BAB71253.1|  881|Homo sapiens protein ( Homo sapiens ...    30   6.1  

>BC146771-1|AAI46772.1| 1649|Homo sapiens CTD-binding SR-like
           protein rA9 protein.
          Length = 1649

 Score = 31.9 bits (69), Expect = 2.0
 Identities = 23/62 (37%), Positives = 28/62 (45%)
 Frame = -1

Query: 501 SGQVETLAVGSVEARGSKSVDEHASVDPFSHPARSPHENIEVLSVVEDSEDFDGFFHLEL 322
           +G  E  +VGS    G  S  EH           S  E++E  S  EDSED DG   LE+
Sbjct: 28  AGDFEESSVGSSGDSGDDSDSEHGDGTDGEDEGASEEEDLEDRSGSEDSED-DGETLLEV 86

Query: 321 VG 316
            G
Sbjct: 87  AG 88


>AB040975-1|BAA96066.1| 1654|Homo sapiens KIAA1542 protein protein.
          Length = 1654

 Score = 31.9 bits (69), Expect = 2.0
 Identities = 23/62 (37%), Positives = 28/62 (45%)
 Frame = -1

Query: 501 SGQVETLAVGSVEARGSKSVDEHASVDPFSHPARSPHENIEVLSVVEDSEDFDGFFHLEL 322
           +G  E  +VGS    G  S  EH           S  E++E  S  EDSED DG   LE+
Sbjct: 33  AGDFEESSVGSSGDSGDDSDSEHGDGTDGEDEGASEEEDLEDRSGSEDSED-DGETLLEV 91

Query: 321 VG 316
            G
Sbjct: 92  AG 93


>BC047713-1|AAH47713.1|  791|Homo sapiens DOCK11 protein protein.
          Length = 791

 Score = 30.3 bits (65), Expect = 6.1
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = -2

Query: 314 WTKVSPRGSMPILYISMNCLRHRHSCTCRNFSRCYTPWRS 195
           W KVSP+  + IL +   CL H      RN +R +  W S
Sbjct: 20  WNKVSPQELINILILLEVCLFHFRYMGKRNIARVHDAWLS 59


>AY692226-1|AAU04438.1| 2073|Homo sapiens Cdc42-associated guanine
            nucleotide exchange factor ACG/DOCK11 protein.
          Length = 2073

 Score = 30.3 bits (65), Expect = 6.1
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = -2

Query: 314  WTKVSPRGSMPILYISMNCLRHRHSCTCRNFSRCYTPWRS 195
            W KVSP+  + IL +   CL H      RN +R +  W S
Sbjct: 1302 WNKVSPQELINILILLEVCLFHFRYMGKRNIARVHDAWLS 1341


>AL391280-3|CAI41411.1| 2077|Homo sapiens dedicator of cytokinesis 11
            protein.
          Length = 2077

 Score = 30.3 bits (65), Expect = 6.1
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = -2

Query: 314  WTKVSPRGSMPILYISMNCLRHRHSCTCRNFSRCYTPWRS 195
            W KVSP+  + IL +   CL H      RN +R +  W S
Sbjct: 1302 WNKVSPQELINILILLEVCLFHFRYMGKRNIARVHDAWLS 1341


>AL391237-2|CAI41407.1| 2077|Homo sapiens dedicator of cytokinesis 11
            protein.
          Length = 2077

 Score = 30.3 bits (65), Expect = 6.1
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = -2

Query: 314  WTKVSPRGSMPILYISMNCLRHRHSCTCRNFSRCYTPWRS 195
            W KVSP+  + IL +   CL H      RN +R +  W S
Sbjct: 1302 WNKVSPQELINILILLEVCLFHFRYMGKRNIARVHDAWLS 1341


>AK125641-1|BAC86230.1| 1215|Homo sapiens 1, beta, convertase)
           (CASP1).  protein.
          Length = 1215

 Score = 30.3 bits (65), Expect = 6.1
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = -2

Query: 314 WTKVSPRGSMPILYISMNCLRHRHSCTCRNFSRCYTPWRS 195
           W KVSP+  + IL +   CL H      RN +R +  W S
Sbjct: 444 WNKVSPQELINILILLEVCLFHFRYMGKRNIARVHDAWLS 483


>AK056684-1|BAB71253.1|  881|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32122 fis, clone PEBLM1000144, moderately
           similar to Trg. ).
          Length = 881

 Score = 30.3 bits (65), Expect = 6.1
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = -2

Query: 314 WTKVSPRGSMPILYISMNCLRHRHSCTCRNFSRCYTPWRS 195
           W KVSP+  + IL +   CL H      RN +R +  W S
Sbjct: 110 WNKVSPQELINILILLEVCLFHFRYMGKRNIARVHDAWLS 149


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,805,146
Number of Sequences: 237096
Number of extensions: 1700784
Number of successful extensions: 3548
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3422
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3548
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7085195460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)