Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0573
(475 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_40385| Best HMM Match : Kelch_1 (HMM E-Value=0) 51 4e-07
SB_46137| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 8e-04
SB_56342| Best HMM Match : Kelch_1 (HMM E-Value=0) 38 0.006
SB_49953| Best HMM Match : BTB (HMM E-Value=2.9e-18) 38 0.006
SB_38405| Best HMM Match : BACK (HMM E-Value=0) 37 0.010
SB_18403| Best HMM Match : BACK (HMM E-Value=0) 37 0.010
SB_49585| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.013
SB_15301| Best HMM Match : Kelch_1 (HMM E-Value=0) 36 0.017
SB_2676| Best HMM Match : Kelch_1 (HMM E-Value=0) 36 0.017
SB_30927| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.023
SB_26836| Best HMM Match : BTB (HMM E-Value=1.1e-37) 36 0.023
SB_8385| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.052
SB_38111| Best HMM Match : Kelch_1 (HMM E-Value=0) 33 0.092
SB_33742| Best HMM Match : Kelch_1 (HMM E-Value=0) 33 0.092
SB_36233| Best HMM Match : Kelch_1 (HMM E-Value=0) 33 0.16
SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13) 33 0.16
SB_28350| Best HMM Match : BTB (HMM E-Value=1.1e-38) 32 0.28
SB_6593| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.28
SB_48518| Best HMM Match : Kelch_1 (HMM E-Value=0) 31 0.49
SB_13053| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.49
SB_54322| Best HMM Match : Kelch_1 (HMM E-Value=0) 31 0.65
SB_31954| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.5
SB_5771| Best HMM Match : Kelch_1 (HMM E-Value=0) 27 6.0
SB_55145| Best HMM Match : Kelch_1 (HMM E-Value=0) 27 6.0
SB_39656| Best HMM Match : ATP_bind_3 (HMM E-Value=0.79) 27 7.9
SB_39376| Best HMM Match : Alpha-amylase_C (HMM E-Value=0.49) 27 7.9
SB_12977| Best HMM Match : BTB (HMM E-Value=1.7e-30) 27 7.9
SB_8489| Best HMM Match : Kelch_1 (HMM E-Value=1.2e-30) 27 7.9
>SB_40385| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 823
Score = 51.2 bits (117), Expect = 4e-07
Identities = 22/50 (44%), Positives = 31/50 (62%)
Frame = +3
Query: 267 LSHTSEKHPRAIXGXLSALRRHRELCXVVLNVXXRXLXAHRVILSAXXPY 416
+ H S++HP+ L ALR+ ELC VV+ V + AHRV+L+A PY
Sbjct: 34 MKHISDRHPKQTLDSLEALRQCEELCDVVIKVGSSTIHAHRVVLAACSPY 83
>SB_46137| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 646
Score = 40.3 bits (90), Expect = 8e-04
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = +3
Query: 249 IPGXARLSHTSEKHPRAIXGXLSALRRHRELCXVVLNVXXRXLXAHRVILSAXXPYXPRR 428
+ +RL+ + E H + + L+ R+ + C V+L V + AHR ILSA P R
Sbjct: 7 VQSQSRLTFSRENHEKRLLELLNEQRKATKFCDVLLEVGDSEIAAHRAILSASIPVLSER 66
Query: 429 CS 434
S
Sbjct: 67 LS 68
>SB_56342| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 651
Score = 37.5 bits (83), Expect = 0.006
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +3
Query: 291 PRAIXGXLSALRRHRELCXVVLNVXXRXLXAHRVILSAXXPY 416
P + L+ LR +LC V L V R L +HRV+L+ PY
Sbjct: 15 PTKVFSSLNELRSEEKLCDVTLVVKDRSLVSHRVVLAGWSPY 56
>SB_49953| Best HMM Match : BTB (HMM E-Value=2.9e-18)
Length = 123
Score = 37.5 bits (83), Expect = 0.006
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +3
Query: 273 HTSEKHPRAIXGXLSALRRHRELCXVVLNVXXRXLXAHRVILSAXXPY 416
+ S++H A L+ +R + E C + L L AHRV+L+A PY
Sbjct: 18 YVSKEHGHAAFQVLNEMRTNSEHCDITLKAGNLVLSAHRVVLAALSPY 65
>SB_38405| Best HMM Match : BACK (HMM E-Value=0)
Length = 423
Score = 36.7 bits (81), Expect = 0.010
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +3
Query: 267 LSHTSEKHPRAIXGXLSALRRHRELCXVVLNVXXRXLXAHRVILSAXXPY 416
+SH H + +R + ELC VVL V R + AHR++L+A Y
Sbjct: 17 ISHFCPTHTEEAFFSMKQMRCNSELCDVVLLVGDRRIYAHRLVLAACSQY 66
>SB_18403| Best HMM Match : BACK (HMM E-Value=0)
Length = 423
Score = 36.7 bits (81), Expect = 0.010
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +3
Query: 267 LSHTSEKHPRAIXGXLSALRRHRELCXVVLNVXXRXLXAHRVILSAXXPY 416
+SH H + +R + ELC VVL V R + AHR++L+A Y
Sbjct: 17 ISHFCPTHTEEAFFSMKQMRCNSELCDVVLLVGDRRIYAHRLVLAACSQY 66
>SB_49585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 655
Score = 36.3 bits (80), Expect = 0.013
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +3
Query: 270 SHTSEKHPRAIXGXLSALRRHRELCXVVLNVXXRXLXAHRVILSAXXPY 416
S+ + H + I ++ LR+ +LC VVL V + AHR++L++ Y
Sbjct: 14 SYLTSGHAKDILTSVNKLRKDGKLCDVVLQVEKKEFPAHRIVLASCSDY 62
>SB_15301| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 590
Score = 35.9 bits (79), Expect = 0.017
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +3
Query: 282 EKHPRAIXGXLSALRRHRELCXVVLNVXXRXLXAHRVILSAXXPY 416
+K+ +AI ++ LR H +C VV+ AHR ILSA Y
Sbjct: 14 DKYSKAILHRINQLRHHGAMCDVVIKAEDTEFLAHRNILSASSDY 58
>SB_2676| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 645
Score = 35.9 bits (79), Expect = 0.017
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +3
Query: 288 HPRAIXGXLSALRRHRELCXVVLNVXXRXLXAHRVILSAXXPY 416
H + + L+ LR+ +ELC V L V + AHRV+LSA Y
Sbjct: 14 HSKQLLIGLNQLRQRKELCDVELCVGNVQISAHRVVLSACSAY 56
>SB_30927| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 501
Score = 35.5 bits (78), Expect = 0.023
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +3
Query: 288 HPRAIXGXLSALRRHRELCXVVLNVXXRXLXAHRVILSAXXPY 416
H ++ LR+ RELC V+L+V R HR++L+ Y
Sbjct: 12 HSNEALQMMNELRKKRELCDVLLHVGGREFRGHRIVLAGASSY 54
>SB_26836| Best HMM Match : BTB (HMM E-Value=1.1e-37)
Length = 521
Score = 35.5 bits (78), Expect = 0.023
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +3
Query: 270 SHTSEKHPRAIXGXLSALRRHRELCXVVLNVXXRXLXAHRVILSAXXPY 416
++ +++H I L LRR +C VL V + H++++SA PY
Sbjct: 10 ANLAKEHAIGILNRLQHLRRLNTMCDAVLKVEEKQFPIHKIVVSASSPY 58
>SB_8385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 580
Score = 34.3 bits (75), Expect = 0.052
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +3
Query: 273 HTSEKHPRAIXGXLSALRRHRELCXVVLNVXXRXLXAHRVILSAXXPY 416
+ + +H +++LR+ LC VVL + AHRV+L++ PY
Sbjct: 18 YKNNEHCNKAFQVMNSLRQQNMLCDVVLKAGSIEIPAHRVVLASSSPY 65
>SB_38111| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 548
Score = 33.5 bits (73), Expect = 0.092
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +3
Query: 297 AIXGXLSALRRHRELCXVVLNVXXRXLXAHRVILSAXXPY 416
A+ L+ R+H LC V + V + AHR +L+A PY
Sbjct: 35 ALMQCLNDFRKHNVLCEVTIVVNGKPFYAHRNVLAAASPY 74
>SB_33742| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 570
Score = 33.5 bits (73), Expect = 0.092
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +3
Query: 297 AIXGXLSALRRHRELCXVVLNVXXRXLXAHRVILSAXXPY 416
A+ L+ R+H LC V + V + AHR +L+A PY
Sbjct: 35 ALMQCLNDFRKHNVLCEVTIVVNGKPFYAHRNVLAAASPY 74
>SB_36233| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 571
Score = 32.7 bits (71), Expect = 0.16
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = +3
Query: 324 RRHRELCXVVLNVXXRXLXAHRVILSAXXPY 416
R+ R LC V LNV AHR IL+A PY
Sbjct: 20 RKERFLCDVTLNVNEVLFHAHRNILAASSPY 50
>SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13)
Length = 1463
Score = 32.7 bits (71), Expect = 0.16
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = +3
Query: 324 RRHRELCXVVLNVXXRXLXAHRVILSAXXPY 416
R+ R LC V LNV AHR IL+A PY
Sbjct: 1389 RKERFLCDVTLNVNEVLFHAHRNILAASSPY 1419
>SB_28350| Best HMM Match : BTB (HMM E-Value=1.1e-38)
Length = 518
Score = 31.9 bits (69), Expect = 0.28
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +3
Query: 288 HPRAIXGXLSALRRHRELCXVVLNVXXRXLXAHRVILSAXXPY 416
H LR EL V L+V + AHRV+L+A PY
Sbjct: 21 HENEAFSVFKELRDDGELLDVTLHVQGEEIKAHRVVLAACSPY 63
>SB_6593| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 31.9 bits (69), Expect = 0.28
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +3
Query: 273 HTSEKHPRAIXGXLSALRRHRELCXVVLNVXXRXLXAHRVILSAXXPY 416
+T E + L + R LC V L R + H+V+L+A PY
Sbjct: 25 YTDEAFSDELCAFLQSQRNDEVLCDVTLRHNERRIPCHKVVLAARSPY 72
>SB_48518| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 481
Score = 31.1 bits (67), Expect = 0.49
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +3
Query: 285 KHPRAIXGXLSALRRHRELCXVVLNVXXRXLXAHRVILSAXXPY 416
KH + LR ++LC V L V R + AHR++L++ Y
Sbjct: 28 KHGIKALMVMDDLRGRKQLCDVTLCVGERQIVAHRLVLASFSSY 71
>SB_13053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 581
Score = 31.1 bits (67), Expect = 0.49
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +3
Query: 324 RRHRELCXVVLNVXXRXLXAHRVILSAXXPY 416
R +ELC V+L V + +H+++L+A PY
Sbjct: 27 RNSKELCDVLLCVDDEEIPSHKLVLAASSPY 57
>SB_54322| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 587
Score = 30.7 bits (66), Expect = 0.65
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = +3
Query: 267 LSHTSEKHPRAIXGXLSALRRHRELCXVVLNVXXRXLXAHRVILSAXXPY 416
++ T ++ + +R+ +LC V L V + AHR++L+A Y
Sbjct: 5 ITETHSEYSACVTRSAERIRQECKLCDVTLVVEGKEFPAHRIVLAASSKY 54
>SB_31954| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 328
Score = 27.9 bits (59), Expect = 4.5
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -2
Query: 228 VAACVTQLQTQRGRSPTPHGVNL*RFCSTP 139
VA+C + + + + TP GVN+ FCSTP
Sbjct: 101 VASCDVAVASDKSQFATP-GVNIGLFCSTP 129
>SB_5771| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 595
Score = 27.5 bits (58), Expect = 6.0
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = +3
Query: 261 ARLSHTSEKHPRAIXGXLSALRRHRELCXVVLNVXXRXLXAHRVILSAXXPY 416
+ L E H + + +R H L VVL V AH+ IL+A Y
Sbjct: 7 SELKFVDENHNDFLVKRIGRMRYHSILTDVVLIVDGHEFPAHKNILAASSDY 58
>SB_55145| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 625
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +3
Query: 312 LSALRRHRELCXVVLNVXXRXLXAHRVILSAXXPY 416
L+ L +LC V + R + HRV+L++ Y
Sbjct: 24 LTQLLEQEKLCDVTIKAGERKIRCHRVVLASCSAY 58
>SB_39656| Best HMM Match : ATP_bind_3 (HMM E-Value=0.79)
Length = 492
Score = 27.1 bits (57), Expect = 7.9
Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Frame = -3
Query: 272 GQPRATGDPPSPILLWPRALPSCK-RSGGEAQPHTESIFDDFVPPHEQTSPKENEIFT-- 102
GQ A PP +WPR P K RSG I V ++ + NEIFT
Sbjct: 84 GQTHAPRRPPFVPKIWPRDAPDLKVRSGINKDGSVNGIATRTV---DKGNISTNEIFTGN 140
Query: 101 TSHNVEC 81
S+ ++C
Sbjct: 141 NSNELDC 147
>SB_39376| Best HMM Match : Alpha-amylase_C (HMM E-Value=0.49)
Length = 679
Score = 27.1 bits (57), Expect = 7.9
Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Frame = -3
Query: 272 GQPRATGDPPSPILLWPRALPSCK-RSGGEAQPHTESIFDDFVPPHEQTSPKENEIFT-- 102
GQ A PP +WPR P K RSG I V ++ + NEIFT
Sbjct: 429 GQTHAPRRPPFVPKIWPRDAPDLKVRSGINKDGSVNGIATRTV---DKGNISTNEIFTGN 485
Query: 101 TSHNVEC 81
S+ ++C
Sbjct: 486 NSNELDC 492
>SB_12977| Best HMM Match : BTB (HMM E-Value=1.7e-30)
Length = 176
Score = 27.1 bits (57), Expect = 7.9
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = +3
Query: 288 HPRAIXGXLSALRRHRELCXVVLNVXXRXLXAHRVILSAXXPY 416
HP L +R E C V L V + H+++L+A Y
Sbjct: 15 HPLEFLQTLDKMRVSGEGCDVTLKVTDQSFPGHKLVLAANSTY 57
>SB_8489| Best HMM Match : Kelch_1 (HMM E-Value=1.2e-30)
Length = 619
Score = 27.1 bits (57), Expect = 7.9
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = +3
Query: 288 HPRAIXGXLSALRRHRELCXVVLNVXXRXLXAHRVILSAXXPY 416
HP L +R E C V L V + H+++L+A Y
Sbjct: 57 HPLEFLQTLDKMRVSGEGCDVTLKVTDQSFPGHKLVLAANSTY 99
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,092,917
Number of Sequences: 59808
Number of extensions: 258419
Number of successful extensions: 932
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 847
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 932
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 994359969
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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