Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0573
         (475 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    29   0.062
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    29   0.062
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    29   0.062
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    29   0.083
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    23   5.4  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   5.4  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    22   9.5  

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 29.5 bits (63), Expect = 0.062
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = +3

Query: 288 HPRAIXGXLSALRRHRELCXVVLNVXXRXLXAHRVILSAXXPY 416
           H   +   L+ L +  +LC V L      + AH+ ILSA  PY
Sbjct: 60  HQSNLTTVLTTLLQDEKLCDVTLACEKGMVKAHQAILSACSPY 102


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 29.5 bits (63), Expect = 0.062
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = +3

Query: 288 HPRAIXGXLSALRRHRELCXVVLNVXXRXLXAHRVILSAXXPY 416
           H   +   L+ L +  +LC V L      + AH+ ILSA  PY
Sbjct: 60  HQSNLTTVLTTLLQDEKLCDVTLACEKGMVKAHQAILSACSPY 102


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 29.5 bits (63), Expect = 0.062
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = +3

Query: 288 HPRAIXGXLSALRRHRELCXVVLNVXXRXLXAHRVILSAXXPY 416
           H   +   L+ L +  +LC V L      + AH+ ILSA  PY
Sbjct: 60  HQSNLTTVLTTLLQDEKLCDVTLACEKGMVKAHQAILSACSPY 102


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 29.1 bits (62), Expect = 0.083
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = +3

Query: 288 HPRAIXGXLSALRRHRELCXVVLNVXXRXLXAHRVILSAXXPY 416
           H   +   L+ L +  +LC V L      + AH+ ILSA  PY
Sbjct: 12  HQPNLTTVLTTLLQDEKLCDVTLACEKGMVKAHQAILSACSPY 54


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 23.0 bits (47), Expect = 5.4
 Identities = 13/29 (44%), Positives = 14/29 (48%)
 Frame = -3

Query: 263 RATGDPPSPILLWPRALPSCKRSGGEAQP 177
           RAT  P  P    PR LPS + S    QP
Sbjct: 422 RATHPPVRPTPSVPRPLPSQEASPSGEQP 450


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 23.0 bits (47), Expect = 5.4
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = +1

Query: 268  CPTPRRNIRAPXSAXSPHCDVIVSYAXSCST 360
            C     NI +     S +CD I SY  SC T
Sbjct: 923  CKNGYWNIVSGNGCESCNCDPIGSYNASCDT 953


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
 Frame = +1

Query: 220 RGHKRM-GEGGSPVARGCPTPR 282
           RG+  M GE G+P  RG P P+
Sbjct: 612 RGYPGMPGEDGTPGLRGEPGPK 633


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 428,701
Number of Sequences: 2352
Number of extensions: 8453
Number of successful extensions: 30
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 41670678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)