Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0573
         (475 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68009-3|CAA92005.1|  817|Caenorhabditis elegans Hypothetical pr...    37   0.009
Z82059-11|CAC42351.2|  591|Caenorhabditis elegans Hypothetical p...    34   0.045
Z82059-10|CAB04878.2|  589|Caenorhabditis elegans Hypothetical p...    34   0.045
DQ338465-1|ABC67522.1|  690|Caenorhabditis elegans KEL-8 protein.      34   0.060
AF067946-5|AAC17684.4|  690|Caenorhabditis elegans Hypothetical ...    34   0.060
AF067219-16|AAC17022.1|  531|Caenorhabditis elegans Hypothetical...    32   0.18 
Z70680-2|CAA94573.1|  424|Caenorhabditis elegans Hypothetical pr...    27   5.2  
AC006809-4|AAO25980.1|  339|Caenorhabditis elegans Activated in ...    27   9.1  

>Z68009-3|CAA92005.1|  817|Caenorhabditis elegans Hypothetical
           protein R09A8.3 protein.
          Length = 817

 Score = 36.7 bits (81), Expect = 0.009
 Identities = 16/34 (47%), Positives = 22/34 (64%)
 Frame = +3

Query: 312 LSALRRHRELCXVVLNVXXRXLXAHRVILSAXXP 413
           L+  RR+RELC  VL V  R +  H+V+L+A  P
Sbjct: 84  LNTFRRNRELCDAVLFVKEREIFVHKVVLAAVSP 117


>Z82059-11|CAC42351.2|  591|Caenorhabditis elegans Hypothetical
           protein T27E9.4b protein.
          Length = 591

 Score = 34.3 bits (75), Expect = 0.045
 Identities = 17/32 (53%), Positives = 20/32 (62%)
 Frame = +3

Query: 321 LRRHRELCXVVLNVXXRXLXAHRVILSAXXPY 416
           LR   +LC V L V  R L AH+VIL+A  PY
Sbjct: 44  LRSKCQLCDVALLVENRKLSAHKVILAATIPY 75


>Z82059-10|CAB04878.2|  589|Caenorhabditis elegans Hypothetical
           protein T27E9.4a protein.
          Length = 589

 Score = 34.3 bits (75), Expect = 0.045
 Identities = 17/32 (53%), Positives = 20/32 (62%)
 Frame = +3

Query: 321 LRRHRELCXVVLNVXXRXLXAHRVILSAXXPY 416
           LR   +LC V L V  R L AH+VIL+A  PY
Sbjct: 44  LRSKCQLCDVALLVENRKLSAHKVILAATIPY 75


>DQ338465-1|ABC67522.1|  690|Caenorhabditis elegans KEL-8 protein.
          Length = 690

 Score = 33.9 bits (74), Expect = 0.060
 Identities = 17/50 (34%), Positives = 26/50 (52%)
 Frame = +3

Query: 267 LSHTSEKHPRAIXGXLSALRRHRELCXVVLNVXXRXLXAHRVILSAXXPY 416
           + + +++    I   +  LR+  ELC V L V    + AHR IL+A  PY
Sbjct: 86  MEYENQEQSSKIMEQMRILRQTEELCDVELLVAGSVIRAHRYILAAASPY 135


>AF067946-5|AAC17684.4|  690|Caenorhabditis elegans Hypothetical
           protein W02G9.2 protein.
          Length = 690

 Score = 33.9 bits (74), Expect = 0.060
 Identities = 17/50 (34%), Positives = 26/50 (52%)
 Frame = +3

Query: 267 LSHTSEKHPRAIXGXLSALRRHRELCXVVLNVXXRXLXAHRVILSAXXPY 416
           + + +++    I   +  LR+  ELC V L V    + AHR IL+A  PY
Sbjct: 86  MEYENQEQSSKIMEQMRILRQTEELCDVELLVAGSVIRAHRYILAAASPY 135


>AF067219-16|AAC17022.1|  531|Caenorhabditis elegans Hypothetical
           protein R12E2.1 protein.
          Length = 531

 Score = 32.3 bits (70), Expect = 0.18
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = +3

Query: 312 LSALRRHRELCXVVLNVXXRXLXAHRVILSAXXPY 416
           L  L+    LC V L    + + AHRV+LSA  PY
Sbjct: 46  LGGLKNRDVLCDVTLICGWKRINAHRVVLSACSPY 80


>Z70680-2|CAA94573.1|  424|Caenorhabditis elegans Hypothetical
           protein C25G4.4 protein.
          Length = 424

 Score = 27.5 bits (58), Expect = 5.2
 Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
 Frame = -3

Query: 224 PRALPSCKRSGGEAQPHTESIFDDF---VPPHEQTSPKENEIFTTSHNVEC*PFN 69
           PR   +  R   + +P  +  F++F    PP +  S  E    +   + EC PFN
Sbjct: 219 PRGSVNKPRQMVKMEPQDDRFFEEFFIDAPPLQSMSSNEEPTSSNKESNECTPFN 273


>AC006809-4|AAO25980.1|  339|Caenorhabditis elegans Activated in
           blocked unfolded proteinresponse protein 4 protein.
          Length = 339

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = -3

Query: 245 PSPILLWPRALPSCKRSGGEAQPHTESIFDDFVPPHEQ 132
           P+P+   P  +P+CK+S     P   S+  + VP  +Q
Sbjct: 123 PAPVQCQPSCMPACKQSCVAPAPQIISLNLEVVPQCQQ 160


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,349,220
Number of Sequences: 27780
Number of extensions: 184932
Number of successful extensions: 533
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 518
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 533
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 860942358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)