Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0570
         (649 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   2.9  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   2.9  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   2.9  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   5.0  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   5.0  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   5.0  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    22   5.0  

>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 6/23 (26%), Positives = 14/23 (60%)
 Frame = -2

Query: 300 SPVH*NK*LRCVWLWSVRIVETF 232
           +P+H +  +  +W+W + I  T+
Sbjct: 121 NPIHTSSYMTGIWVWLINISATY 143


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 6/23 (26%), Positives = 14/23 (60%)
 Frame = -2

Query: 300 SPVH*NK*LRCVWLWSVRIVETF 232
           +P+H +  +  +W+W + I  T+
Sbjct: 354 NPIHTSSYMTGIWVWLINISATY 376


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 6/23 (26%), Positives = 14/23 (60%)
 Frame = -2

Query: 300 SPVH*NK*LRCVWLWSVRIVETF 232
           +P+H +  +  +W+W + I  T+
Sbjct: 354 NPIHTSSYMTGIWVWLINISATY 376


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 13/33 (39%), Positives = 15/33 (45%)
 Frame = +1

Query: 91  GSERETDMCCRDHDNCPDLILAGETKNNLTNSA 189
           G E  +   C  HD  PD I +    NN T SA
Sbjct: 103 GCEMPSAGLCGSHDEIPD-ISSTRGNNNNTPSA 134


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +1

Query: 67  VADDYEDLGSERETDMCCRDHDNCPDL 147
           V D  +    E+  D+C R HD   D+
Sbjct: 219 VKDKKKSRSDEQTIDICMRCHDQLCDM 245


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 13/33 (39%), Positives = 15/33 (45%)
 Frame = +1

Query: 91  GSERETDMCCRDHDNCPDLILAGETKNNLTNSA 189
           G E  +   C  HD  PD I +    NN T SA
Sbjct: 51  GCEMPSAGLCGSHDEIPD-ISSTRGNNNNTPSA 82


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 13/33 (39%), Positives = 15/33 (45%)
 Frame = +1

Query: 91  GSERETDMCCRDHDNCPDLILAGETKNNLTNSA 189
           G E  +   C  HD  PD I +    NN T SA
Sbjct: 234 GCEMPSAGLCGSHDEIPD-ISSTRGNNNNTPSA 265


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,598
Number of Sequences: 336
Number of extensions: 2947
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)