Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0570
         (649 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    90   2e-20
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    90   2e-20
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    90   2e-20
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    24   1.5  
M29489-1|AAA27724.1|  109|Apis mellifera protein ( Bee homeobox-...    22   5.9  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   5.9  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   5.9  

>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 89.8 bits (213), Expect = 2e-20
 Identities = 36/69 (52%), Positives = 49/69 (71%)
 Frame = +1

Query: 43  TKWCGAGNVADDYEDLGSERETDMCCRDHDNCPDLILAGETKNNLTNSAFYTRLSCECDE 222
           T WCG GN +    +LG  + TD CCR HD CPD++ AGE+K+ LTN+A +TRLSC+CD+
Sbjct: 34  TLWCGHGNKSSGPNELGRFKHTDACCRTHDMCPDVMSAGESKHGLTNTASHTRLSCDCDD 93

Query: 223 GFRKCLHDA 249
            F  CL ++
Sbjct: 94  KFYDCLKNS 102



 Score = 58.4 bits (135), Expect = 6e-11
 Identities = 22/55 (40%), Positives = 36/55 (65%)
 Frame = +3

Query: 270 IGVIYFNALGTKCYRKDYPIVKCTMRGGWFKRKCLRYDVDMNEDQIYQWFDVNNY 434
           +G +YFN + TKCY+ ++P+  C  R    + +CL Y VD ++ ++YQWFD+  Y
Sbjct: 111 VGKMYFNLIDTKCYKLEHPVTGCGERT---EGRCLHYTVDKSKPKVYQWFDLRKY 162


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 89.8 bits (213), Expect = 2e-20
 Identities = 36/69 (52%), Positives = 49/69 (71%)
 Frame = +1

Query: 43  TKWCGAGNVADDYEDLGSERETDMCCRDHDNCPDLILAGETKNNLTNSAFYTRLSCECDE 222
           T WCG GN +    +LG  + TD CCR HD CPD++ AGE+K+ LTN+A +TRLSC+CD+
Sbjct: 39  TLWCGHGNKSSGPNELGRFKHTDACCRTHDMCPDVMSAGESKHGLTNTASHTRLSCDCDD 98

Query: 223 GFRKCLHDA 249
            F  CL ++
Sbjct: 99  KFYDCLKNS 107



 Score = 58.4 bits (135), Expect = 6e-11
 Identities = 22/55 (40%), Positives = 36/55 (65%)
 Frame = +3

Query: 270 IGVIYFNALGTKCYRKDYPIVKCTMRGGWFKRKCLRYDVDMNEDQIYQWFDVNNY 434
           +G +YFN + TKCY+ ++P+  C  R    + +CL Y VD ++ ++YQWFD+  Y
Sbjct: 116 VGKMYFNLIDTKCYKLEHPVTGCGERT---EGRCLHYTVDKSKPKVYQWFDLRKY 167


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 89.8 bits (213), Expect = 2e-20
 Identities = 36/69 (52%), Positives = 49/69 (71%)
 Frame = +1

Query: 43  TKWCGAGNVADDYEDLGSERETDMCCRDHDNCPDLILAGETKNNLTNSAFYTRLSCECDE 222
           T WCG GN +    +LG  + TD CCR HD CPD++ AGE+K+ LTN+A +TRLSC+CD+
Sbjct: 39  TLWCGHGNKSSGPNELGRFKHTDACCRTHDMCPDVMSAGESKHGLTNTASHTRLSCDCDD 98

Query: 223 GFRKCLHDA 249
            F  CL ++
Sbjct: 99  KFYDCLKNS 107



 Score = 58.4 bits (135), Expect = 6e-11
 Identities = 22/55 (40%), Positives = 36/55 (65%)
 Frame = +3

Query: 270 IGVIYFNALGTKCYRKDYPIVKCTMRGGWFKRKCLRYDVDMNEDQIYQWFDVNNY 434
           +G +YFN + TKCY+ ++P+  C  R    + +CL Y VD ++ ++YQWFD+  Y
Sbjct: 116 VGKMYFNLIDTKCYKLEHPVTGCGERT---EGRCLHYTVDKSKPKVYQWFDLRKY 167


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -1

Query: 115 TCLSPVRILGLRSRLPRYQPRTIS 44
           +CL  +R LG ++ +  Y P T+S
Sbjct: 402 SCLRELRNLGRKTIMVNYNPETVS 425


>M29489-1|AAA27724.1|  109|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone E60. ).
          Length = 109

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 360 KRKCLRYDVDMNEDQIYQWF 419
           +R+ L  D+ +NE QI  WF
Sbjct: 49  RRQQLSRDLGLNEAQIKIWF 68


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = +2

Query: 521 SGLKLGLHVLWIPETDIHTYI 583
           S L+L   +L+IPE+D+ T++
Sbjct: 292 SYLRLKGQMLYIPESDLVTFL 312


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = +2

Query: 521 SGLKLGLHVLWIPETDIHTYI 583
           S L+L   +L+IPE+D+ T++
Sbjct: 292 SYLRLKGQMLYIPESDLVTFL 312


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,273
Number of Sequences: 438
Number of extensions: 3475
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19560480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)