Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0566
         (556 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       22   3.1  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   5.5  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    21   5.5  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    21   5.5  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   5.5  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   7.2  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   9.5  

>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +2

Query: 188 PITKGEAHHKCRKTIXYEXN 247
           P+T+ E H K R+ + +  N
Sbjct: 368 PLTREEIHEKARENLKHHAN 387


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -3

Query: 227 FYDICDELH 201
           FY+ICD LH
Sbjct: 799 FYEICDFLH 807


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
 Frame = +2

Query: 260 WSTPTSSGCNAPRTSSGIVSR-VSSHL 337
           W TPTSS         G++S  V+S L
Sbjct: 7   WDTPTSSAPAFSEQRGGVISEGVASSL 33


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = -1

Query: 328 THPGNNPGRCP 296
           TH G  P RCP
Sbjct: 43  THSGEKPFRCP 53


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = -1

Query: 328 THPGNNPGRCP 296
           TH G  P RCP
Sbjct: 299 THSGEKPFRCP 309


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +1

Query: 262 EYAYQLWMQCSEDIVRDCFPGEFTLILS 345
           +Y  Q+W   S+  VR+     + +ILS
Sbjct: 440 KYIIQIWTTGSDPQVRNLLDNGYRVILS 467


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +2

Query: 299 TSSGIVSRVSSHLFLAXNYVKLMY 370
           T++G     SSH + A NY    Y
Sbjct: 287 TANGHGHNTSSHNYYAQNYAPTYY 310


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,896
Number of Sequences: 336
Number of extensions: 1258
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13725787
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)